Capra hircus (goat): 102181213
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Entry
102181213 CDS
T02910
Symbol
PRDM1
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
chx
Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
chx03000
]
102181213 (PRDM1)
Transcription factors [BR:
chx03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
102181213 (PRDM1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2H2_jaz
zf-C2HE
zf-met
Motif
Other DBs
NCBI-GeneID:
102181213
NCBI-ProteinID:
XP_017908604
UniProt:
A0A452FSZ3
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Position
9:complement(31109823..31132643)
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AA seq
825 aa
AA seq
DB search
MLDICLEKRVGTTLAAPKCSSSAVKVPGLAEGTMKMDMEDADMTLWTEAEFEEKCTYIVN
DHPWDSGVEGGTSVQAEASLPRNLLFKCATNTKEITGVVSKEYIPKGTRFGPLIGEIYTS
DTVPKNANRKYFWRIYSRGELHHFIDGFNEEKSNWLRYVNPAHSAREQNLAACQNGMNIY
FYTIKPIPANQELLVWYCRDFAERLHYPYPGELTMMNLTQTQGRPKQQSTEKHELCPKSV
PKREYSVKEILKLDSRPSKGKDLHRSNISPLTSEKDADDFRKDGSPEMPFYPRVVYPIRA
PLPEDFLKAPLGCYGMERPPYVTHSPIPSSATPSPSARSSPDRSLQSCSPHSSPGNTVSP
LAPGPQEARDSYAYLNAPYGAASEGLGSFAGYGPPTHLPPAFIPSYNAHYPKFLLPPYGM
NCNGLGAAVGNINSLNSFGLFPRLYPVYSSLLGGGGLPPPMLAPASLPSSLPSEGARRLL
QPEHPREVLVPAPHSAFSLPGAAASLKDKACTPTSGSPTAGTAATAEHVVQPKATSAAAA
APGGEEAVNLIKNKRNMTGYKTLPYPLKKQNGKIKYECNVCAKTFGQLSNLKVHLRVHSG
ERPFKCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPY
QCKVCPAKFTQFVHLKLHKRLHTRERPHKCAHCHKSYIHFCSLRVHLKGHCPVAPATVLP
LEDLTRINEEIEKFDISDNADRLEDMEDNIDVTSVVENEILAVVRKEKEETGLKVSLQRN
MGNGLLSGCSLYESTEPPLLKLPHSNPLPLGPVKVKQETVEPMDP
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgttggatatttgcttggaaaaacgtgtgggtacgaccttggctgcccccaagtgtagc
tccagtgctgtgaaggttccagggttggcagaagggaccatgaaaatggacatggaggac
gcggatatgactctgtggacagaggctgagtttgaggagaagtgtacatacattgtgaat
gaccacccctgggattctggtgtggaaggaggcacttcggttcaggcagaggcttcctta
ccgaggaatctgcttttcaaatgtgccacaaacaccaaagagattactggagtggtgagt
aaagaatacataccaaagggaacacgttttggacctctaataggtgaaatctacaccagt
gatacagttcccaagaacgccaacaggaaatatttttggcggatctattccagaggggag
cttcaccacttcattgatggctttaatgaggagaagagcaactggctgcgctacgtgaac
ccagcacactctgcccgggagcagaacctggccgcctgtcagaacggcatgaacatctac
ttctacaccattaagcccatccctgccaaccaggagcttcttgtgtggtactgccgggac
tttgcagaaaggcttcactacccttatcctggagagctgacaatgatgaatctcacacaa
acccagggccgtccaaagcagcagagcactgagaagcatgaactgtgccccaagagtgtc
ccgaagagagagtacagcgtcaaagagatcctgaaactcgactcccgcccttccaaaggg
aaggacctgcaccgctccaacatttcacccctcacttctgagaaggacgcggatgacttc
aggaaagacgggagcccggagatgcccttctacccgcgcgtggtgtacccgattcgcgcc
ccgctcccggaagactttctgaaagcacccctgggatgctacgggatggagcggccgccc
tacgtcactcactcccccataccgtcctccgcgacgcccagcccctcggcgcgcagcagc
ccggaccggagcctgcagagctgcagcccgcacagcagccccgggaacacggtgtcgccg
ctggcccccggcccccaggaggcccgcgactcctacgcctacttgaatgccccctacggg
gccgcctccgaggggctgggctccttcgccggctacgggccgcccacccacctgccgccc
gccttcatcccctcctacaatgcgcactatcccaagttcctgctgcccccttacggcatg
aactgcaacggcctgggcgctgccgtgggcaacatcaacagcctcaacagcttcggcctc
ttcccgaggctgtacccggtgtacagcagcctcttgggcgggggcggcctgcctcccccg
atgctggcgcccgcctcgctccccagctcgctgccctcagagggggcgcgccgcctgctg
cagcccgagcacccccgggaggtgctggtgcccgcgccgcacagtgccttctccctcccc
ggggcggcagccagcctgaaggacaaggcctgcacccccaccagtggctccccgacggcc
gggaccgccgccacggccgagcacgtggtgcagcccaaagctacctcagcggctgctgcg
gccccgggaggcgaggaggccgtgaatctcatcaagaacaaaagaaacatgactggctac
aagacgctcccctacccgctgaagaagcagaacggcaagatcaagtatgagtgcaacgtc
tgcgccaagactttcgggcagctctcaaatctgaaggtccacctcagagtgcacagtgga
gaacgacctttcaaatgccagacgtgcaacaagggcttcactcagcttgcccatctgcag
aaacactacctggtacacacaggagagaagccacatgaatgccaggtttgccacaagcga
tttagcagcaccagcaatctcaagacccacctgcgactccactccggagagaaaccttac
cagtgcaaggtgtgtcctgccaagttcacccagtttgtgcacctgaaactccacaagcgc
ctacacacccgggagcggccccacaagtgcgcccactgccacaagagctacatccatttc
tgcagcctcagggtccacctgaaggggcactgtcctgtggccccagccactgtgctgcct
ctggaggacctgaccagaatcaacgaagaaattgagaagtttgacatcagcgacaatgcc
gaccggctggaggacatggaggacaacatcgacgtgacctctgtggtggaaaacgagatt
ctggccgtggtcagaaaagagaaggaagaaactggcctgaaagtgtctttgcaaagaaac
atgggaaatggactgctctcagggtgtagcctctatgagtcaacagagccgcccctcctg
aagttgcctcacagcaacccactacctctgggacctgtaaaggtcaaacaagaaacagtt
gaacctatggatccttaa
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