Capra hircus (goat): 102181353
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Entry
102181353 CDS
T02910
Symbol
RTTN
Name
(RefSeq) rotatin isoform X1
KO
K16484
rotatin
Organism
chx
Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
chx03037
]
102181353 (RTTN)
Cilium and associated proteins [BR:
chx03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
102181353 (RTTN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RTTN_N
CEP104-like_TOG
Arm_2
Motif
Other DBs
NCBI-GeneID:
102181353
NCBI-ProteinID:
XP_013829759
LinkDB
All DBs
Position
24:7232114..7339498
Genome browser
AA seq
2229 aa
AA seq
DB search
MVLTGLIRKLGHPLAEIRERALRSILCKLEHSLVRGADLASHRLLFLHLLEWFNFPSVPM
KDEVLGLLSRLVKYPPAVQHLVDLGAVEFLSKLRPNVEPNLQAEIDGILDGLFSLPSEVP
ETYSSSYQTSQTDLLHQPEILTGYFPQEKSTLQQTEIPSRPVAANRTAKCLKFSTFPWLP
LTAADRHVLSSNESSLRSSNHTVIWNSCELLKDVIMQDFPAEIFLQRPKIVQSLLSLLKL
AFGGDGKHRLALQSVSCLQQLCTCLRNRLNFHRDPSFFSNKQDAVSQNSSLSYCPDARAA
PHSQNPSPGSSSPRPSVVGRTGQRPRGDGQDWDAVSSSGSSSHAHVSSRVSAPSPLDLAP
VDLPELAEDTLELQLQQLSLPQLCVSLLEAATPLLRTGSRQMIIRVLELLAEVLVLIGEA
ISAHLWDDSSLFAIDMKEKLLVVVASLGDTMCYHKSSVSLEQPEALVVHHRMAFVSISLF
AVRLLQTLLPVEKASRFLPEPMSAALFFISLDMPVSLEYPDIHEAVVAYLEQLNSENYSI
YKRTAEAAYSIECTCNFLSDVGKEGEKNLLELVELADQALRSFSYHQHFPLIKEIISICS
KIWKSVQASPLLQGESQKVFLRMLSHPLLQVKVETYHCCLEIVKECLGIHSISKPVSSLC
NGIHFLLHPKVLYEISAFGIQEPKNEVSAAAKAILVHLLQGRLRVTAPTWNKFIESLCPV
IPVLQGYADTEDPLGKCILHLSRESPETDEGVLPSAARLKSMLRLLLVKKPSVRVLALKL
LASYLTREEGADTKRPSIDARVLSRVTNLFIVKKPIELKLDDRRELMIKLETVEKVYEIF
VSDDIDLVLRKSAAEQLVVIMQDIKMHAVVKKLHLVDKIIEYLSECVGQDGEVVECLAQP
SLTLLRKVLCADPVLRVSLSQQTSVLTLLFRVSLIFHEDCTIVTEVGALFCLLLFDEVSR
MDMWSESPSCTPSSPSVFSLPVSVSRRYHLPVHVLGHHAVSPYSMVLPLSADSLALKPVS
DMLRMAWNLSWYHGSDSVLKQVNSEAEIQEFLDTLKLSTEDTLTLKMTHTPSGLKDCLRS
IVQAAGHREVRAALTRMSFYLLNDRLSFKGGTGPCGVTLKSLSWHTTLSRFLQVLPACTE
DEKLLIDIIHFLSKLLKEQRKNVPVELLNWLLELLLRQSPNPLLDLLVLTESQTQEETDD
VRTAVRQQLQKELMALFSTLLLSFEAVTDRKCLELFYVFQTQLALKLLQCLRVTDAPHFY
GLPSLERTLRGMAHLTACPGWSAHSPLTKPLDICGKYLSGLLEVITSFYVERGGNAMSFM
GKGVTKSTVLCLLHLSHEMMVQAQSSEWMSLWFLPLGSQSEDHAPTQQGLAWLIPLWVDR
DPEVRFTSLGLGSALTTLETGCVALANSCQNISGGLWGTVVNILLDQSECSMVRREAAFI
FQNLLVIPMPSVILKDYTWQGPCVHDEDSGLSLIGKPALQALLYHCHFYEHLNQMVKHCY
LGRYAFDFSFSALNGAPEGNDLNGLDDSFKFWRAPSRMSSQDRDPSSLSTSETMVAASSG
SAEFQSLMLSMVPHPEVIHDQLVAQGQREAASPRLPPDSPLSAPLPRQCVFVTPPLLSAM
CSLLDSLLVATPGDTASAFRRTRLIELLCSIADATLLETSVQELRALLPTSLPAEHTQAQ
VSFLLEYLSSLSRLLQSCLLVDPDLVIQDELLKPLIPNLIQVLTLCTKDILDVELTSAFY
QTWTHLFHLLAALLRRAGPASFPSVTMGLARSWAAVIDAFCRCACLSATSPALYTASLQF
LSILLTEEAKRHLQDKDKASFCHNPTVASLLDKTQESQNSLERLTEVILQCYEGKTSKDV
LKRVAANALMSLLAVSRKAQRHALKAHLVDSCVEQMKHIHAQLNLGSLKPGRAALKKKED
GFIKELSIAMQLLRNCLYQNEECKEAALDAHLVPVLHALWPWLLMDDSLMQVALQLLCVY
TANFPNGCSSLCWSSYGQHPVQAAHRGAPGSSLMLCILKMASQVPPENTAFQQTVFMILS
NLALSHDCKGVIQKSNFLQNFLSLTLPKGGNKHLSNLSVLWLKLLLNMSFEEDGQQVILR
LDGCLDLLTEMSRFKHKSSLSIPLLIFHNICFSPANKPKILANEKVISVLAACLESENQN
AQRIGAAALWALIHNYQKAKTTLKNPSIKRRVEEAYSLAKKTFSDSEETPLSAYYLKCLE
NLVQQLNSS
NT seq
6690 nt
NT seq
+upstream
nt +downstream
nt
atggtcctgaccgggctcatccggaaactcggtcacccgctggccgagatccgggagcgc
gcgctcaggagtattctctgcaagctcgagcacagcttggtccgcggcgcggacctggct
tcgcacaggctgctgtttctccacttgctggaatggttcaatttcccgtccgtcccaatg
aaggacgaggtcctgggtctgctgagcagactggttaagtatcctccggcagtgcagcat
ttggtcgatcttggtgcagtcgaattcttatctaaacttcgccctaatgtggagccgaat
ctgcaggcggaaattgatggcattctggatggactttttagtcttccttcagaagttcct
gaaacatattcttcatcttaccagaccagtcaaactgatttgctgcatcaacctgaaatc
ttaacaggatattttcctcaagagaaaagtactttgcagcagacagaaataccttcacga
cctgtggcagcaaatcggaccgcgaagtgcttgaagttttctactttcccctggctcccc
ctgaccgcagctgacagacatgttctctcgtccaatgaaagctctttaagaagtagtaac
cacactgtaatctggaactcctgtgaactgttgaaagatgttatcatgcaagattttcct
gctgagatattccttcaaaggccaaaaattgttcagagccttttatctctgttgaaactg
gcctttggaggagacgggaagcatcgtctggcattacagtcagtgtcctgcctgcagcag
ctgtgcacgtgtttaagaaacagactcaatttccacagagatccaagtttcttctctaat
aaacaagatgccgtgtcccagaactcttccctgtcttactgtcctgacgccagggcggct
ccgcattcccagaacccatctcccggaagcagcagcccgcggccctccgtggtggggcgc
acgggtcagcggccgcggggggacggccaggactgggacgccgtgtcctccagtgggagt
agcagccacgctcacgtcagctcgcgggtctctgccccctcgcctctggacctggcgccc
gtggacctgccggagctggcggaggacacgctggagctgcagctgcagcagctgagcctg
ccccagctctgcgtctccctcctggaggccgccacgcccctcctgaggacaggtagtaga
cagatgataataagagttctggagttgctcgcagaagttttggtgcttattggtgaagcg
atttcagcacatctgtgggatgacagcagtctttttgcaatagatatgaaagagaagctg
cttgtggtggtggcgtcccttggagacaccatgtgctaccataaaagcagcgtcagtctg
gagcagccggaggcgctggtcgtgcaccataggatggcctttgtcagcatctcgctgttt
gccgtccggctcctgcagacgctgctccctgtggaaaaggcaagccgctttttaccggaa
cctatgtcagcagcattattttttatttctttggatatgccagtttctttggaatatcca
gatattcacgaagctgttgtggcctatttggaacagctgaattctgaaaactacagtatt
tataaacgaactgcagaggctgcttattcaattgagtgtacctgtaacttcctgtctgat
gttgggaaggagggagaaaagaatctcttagagttagtggagctggcagatcaagcctta
cgtagcttttcctaccatcagcatttccccctaataaaggaaatcatctccatttgttca
aaaatctggaaatctgtgcaggccagtcctttactacagggagaaagtcagaaggtgttt
ctgcggatgttgtctcatcctttgctacaagtgaaagttgaaacttaccactgctgtctg
gaaattgttaaggagtgtttaggcatccatagtatcagtaaacctgtgtcttccctttgt
aatggaattcattttctacttcacccaaaagttctgtatgaaatctctgcatttggcatt
caagagcccaaaaatgaggtgagcgctgcagccaaggccatcctggtgcacctgctgcag
ggccgactgagggtgacggcgccgacctggaacaagttcatcgagtccctgtgccccgtc
atccccgtgctgcagggctacgccgacactgaagaccctctggggaaatgcatcctccac
ctcagcagagagagtccggagaccgacgaaggggtgctcccctctgccgcccggctgaag
tccatgctgcggctcctgctggtgaagaagccctcggtccgggtgctggcattaaagctc
ttagcatcttaccttacaagggaagagggggctgataccaagcgcccttcaatagatgcc
agagttctctccagagttactaatttatttattgtgaaaaaacctattgaactcaaattg
gatgaccgaagagaactgatgattaagttggagactgttgaaaaggtgtatgaaatcttt
gtctcagatgatattgatcttgttttgagaaagtcagccgcagagcagttagtggtgatt
atgcaagatattaaaatgcatgctgtggtgaaaaaattgcacctagttgacaagataatt
gagtatttaagtgaatgtgtgggtcaggatggtgaggtggtggagtgcctggctcagccg
agcctcacgctcctgaggaaggtcctctgcgctgacccggtcctgcgagtttctctgtcc
cagcagacttctgtcctgaccctgctcttcagagtttccttgatatttcacgaagattgt
acgattgtgactgaagttggagcattgttttgtcttctgttatttgatgaagtatcaaga
atggatatgtggtctgagagtccttcctgcacaccatcttcgccatcagtcttcagtctg
cctgtttcagtttctagaaggtatcatctaccagtgcatgtacttggccaccatgccgtg
agtccttactccatggtgctgccgttatctgctgactctttggccttgaagccggtatca
gatatgctgaggatggcttggaacctctcgtggtatcacgggagtgacagtgtgttgaag
caagtgaactctgaagctgagatccaggaatttttagatacactgaagttatccaccgag
gacacccttactctgaagatgacccacacacctagtggactcaaggactgtctccgctcc
atcgttcaggctgcaggccacagggaagtgagggctgccctcacaaggatgagtttttat
cttctaaatgacagattgtctttcaagggcggcactggcccctgtggggttaccctgaag
tccttgtcttggcacaccacactaagcaggtttttacaagttcttcctgcttgcactgaa
gatgagaagctgttaatagatatcatacattttctcagcaagttattgaaggaacaaagg
aaaaatgtacctgtagaacttctaaactggcttctagaattacttcttagacaaagtcca
aatccactgttggacctgctggttctgacggagtcccagacgcaagaggaaacagatgat
gtccgcactgcggtcaggcagcagctccagaaagagctgatggctctctttagtaccttg
ctgctcagttttgaggccgttactgacaggaaatgcttggagcttttttacgttttccaa
acacagctggccctgaaactactccagtgtctgagagtcacggacgctcctcacttctat
ggcctgccgtccctcgagaggaccttgcgggggatggcccacctcacggcgtgtccgggg
tggagcgcacactctcctctcacaaagccactcgacatttgtgggaagtacttgtcaggt
ctccttgaagtcatcacatccttctacgtggagcgaggaggaaatgcaatgtccttcatg
ggaaaaggtgtcacaaagagcaccgttctctgcctgctccacttgtcgcacgagatgatg
gtccaggcccagagctcggagtggatgtcactttggttcttgcctttggggagtcagagt
gaagaccacgctcccactcagcagggattggcttggctgattccattgtgggttgaccga
gacccagaggtgaggttcacttcattgggattaggatcagcactaaccacccttgaaact
ggctgtgtggccttggcaaacagttgtcaaaacatttctggtgggctctggggaacggtg
gtgaacattcttctggaccagtcggaatgcagcatggtgcgccgggaggctgcatttatt
tttcagaatctccttgtaattccaatgccttcagtaattctaaaggattatacttggcag
ggcccctgtgtccatgatgaggactctggcctgtctctcataggaaaacctgccctccag
gctcttttataccactgccatttttatgaacatttgaatcagatggtaaaacattgttac
ctgggacggtatgcatttgatttcagtttttcagctcttaatggagctcctgaaggcaat
gatttaaatggtttagatgactcgttcaagttctggagggctccatctcgaatgtccagt
caagatcgagatccaagttctctctctacctcagaaacaatggtggcagcttcgtcgggc
agtgctgagtttcagtctctcatgctctccatggtgcctcaccctgaagtcatacacgac
cagctggtggcccaaggtcagcgtgaagctgcgtctccacggcttcctcctgattcaccc
ctctctgctcctctgcccaggcagtgtgtgtttgtcaccccacccctcctctccgcgatg
tgcagcctcctagacagcctcttggtggccactccaggcgacactgccagcgctttccga
cgaacccgtctcattgagcttctctgtagcatcgcagatgccaccctcctagagacaagc
gtccaggagctccgggccctgctacccacgtctcttcctgctgaacacactcaagctcag
gtgtcctttctcctagaatacctgtcctccttatcccggcttctgcagtcatgtttattg
gtggatcctgaccttgttattcaggatgagcttctgaaacctcttatcccaaacctcatc
caagttctcaccctatgcaccaaagatatattagatgtagagttaacgtcagctttttat
cagacgtggactcacctgttccaccttctggctgcactgctgaggcgagctggccctgcc
tctttcccatctgtgaccatgggtctggcccggtcctgggcagcggtgatcgatgcattc
tgcaggtgtgcgtgtttgtctgccacaagccccgctctgtataccgccagcctgcagttc
ctttctattctcttgactgaagaggcaaaaaggcatctccaggataaggataaagcaagc
ttctgccacaatccaacagtggcttcacttcttgacaagacccaggaaagtcagaactct
ctagaacgacttactgaagtaattcttcagtgctatgaaggaaaaacctccaaagatgtc
ctgaagagggtcgctgcgaacgcactgatgtcacttctggccgtcagcagaaaagcacaa
agacacgcgctgaaggctcatctcgtagacagctgcgtggagcagatgaagcacattcat
gcacagctgaacctgggctctctgaagccggggagggcagcgctgaagaaaaaggaggat
ggttttattaaagaattaagcattgccatgcagctcctaagaaactgtctttatcagaat
gaagaatgtaaagaggcggctctggacgctcacctggtccccgtcctgcatgctctctgg
ccttggctcttgatggatgactcactgatgcaggttgcgctgcagctgctttgtgtctac
accgcaaatttcccaaatggttgcagttccctctgttggtcaagttacggacagcatcct
gttcaagccgcacaccgaggggcccccggcagctccctgatgctgtgtatcctgaagatg
gcttcccaagtgcctccagagaacacggcttttcagcagacagtgttcatgatcctttca
aacctggccttatctcacgactgtaaaggggtaattcagaaaagtaacttcctgcagaac
tttctgtctctgacgttgccgaaagggggaaacaaacatctgagtaacctgagcgtgctc
tggctgaagctgctgctgaacatgtccttcgaagaagacgggcagcaggtgattctgcgg
ctggacggctgtctagacttgctcacggagatgagcagattcaagcacaagagcagcctc
tccatcccccttcttattttccataacatctgcttcagtcctgccaacaagcccaagatc
ctggccaacgagaaagtgattagtgtgctcgctgcttgtctggaaagtgagaatcaaaac
gcccagaggattggagcagccgcactgtgggctctcattcacaattaccagaaggcaaaa
acaactttgaaaaatccatcaataaaaagaagagtggaagaagcatattccttagcaaag
aaaactttctcagactcagaagaaacccctctaagtgcctattatttgaaatgtcttgaa
aatcttgtgcagcagcttaattcttcatga
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integrated database retrieval system
