Capra hircus (goat): 102181432
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Entry
102181432 CDS
T02910
Symbol
HELZ
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
chx
Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chx03019
]
102181432 (HELZ)
Messenger RNA biogenesis [BR:
chx03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
102181432 (HELZ)
3'-5' decay
Other 3'-5' decay factors
102181432 (HELZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
zf-CCCH
UvrD-helicase
AAA_30
ResIII
PAM2
PhoH
zf_CCCH_4
Mov-10_helical
AAA_22
AAA_16
zf-CCCH_4
AAA_7
Bac_DnaA
Mg_chelatase
AAA_5
Motif
Other DBs
NCBI-GeneID:
102181432
NCBI-ProteinID:
XP_017919466
LinkDB
All DBs
Position
19:complement(62291700..62443321)
Genome browser
AA seq
1937 aa
AA seq
DB search
MEDRRAEKSCEQACESLKRQDYEMALQHCTEALLSLGQYSVADFTGPCPLEIESIKIESL
LYRIASFLQLKNYGQADEDCRHVLGGGLAEGDGAFQAVLCCMQLEGKLQPVTRILAKSLT
GESLNGMVTKDLTRLKTLLTETETATSNVLSGYHVEDLEEGSCNGWHFRPPPRGITSSEE
YTLCKRFLERGICRYGAQCTSAHSQEELAEWQKRYASRLIKLKQQNENKQLSGSYMETLI
EKWMNSLSPEKVLSECVEGVKVEHDPGLSVTVNTKKSHQTWTFALTCKPARMLCRVALLY
DAHRPHFSIIAISAGDSTTQVSQEVPENCQEWIGGKMAPNGLDHYVYKVGIAFNTEIFGT
FRQTIVFDFGLEPVLMQRVMIDAASTEDLEYLMHAKQQLVTTAKRWDSSSKTVVDFEPNE
TTDLEKSLLIRYQIPLSADQLFTQSVLDKSLTKTNYQSRLHDLLYIEEIAQYKEVSKFNL
KVQLQILASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVP
KEKLVQTQGTKEKVYEATIEEKTKEYIFLRISRECCEELNLRPDYDTQVELQFQLNRLPL
CEMHYALDRVKDNGVLFPDIAMAPAIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQ
LPPVLIIGPYGTGKTFTLAQAVKHILQQQETSRILICTHSNSAADLYIKDYLHPYVEAGN
PQARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKHRVVVVTLNTSQYLC
QLDLDPGFFTHILLDEAAQAMECETIMPLALATRHTRVVLAGDHMQLSPFVYSEFARERN
LHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKEFYP
LTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQ
VFRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDS
TEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENSSLHG
ITFEQIKAQLEALELKKTYVLNPLAPEFIPRALRAQHTGNTNKPQQSPPKGKSLHHTQND
HFQNDGIVQPNPSVLIGNPIRAYTPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVY
GGNVVMSVPLPVPWTGYQGRFAVDPRIITHQAAMAYNMNLLQTHGRGSPIPYGLGHHPPV
SVGQPQSQHQEKDQHEQSRNGKSDTNNPGPEISKVRTPEKKPAEAKQIDLESNPQNRSPE
SRPGIVYPNPKFHRKDNLTPRHINLPLPAPHAQYAIPGRHFHPLPQLPRPPFPIPQQHAL
LNQQQSTLPEQPSPVPAQPSQVAPQLGPPPPQLSPAYPAGPGSAFFNNAVPHRPQSPPAE
AVVPEQQPPPVLPEGHSPLRALAQPGPILPSPLNSFPDESPPGLPMGEALDRVHGSVALE
TLRQQHVRLQQWGEHHACLSQGGLPYPHHPHPHPHLQHLPQPPVGLPQPPARADWKLPSS
AEDEAETTDSRFQDLLRELSNREQSETRELAEMPPPQSRLLQYRQIQTRSPPAAPSPPSS
ADPSTHFPNFPDSSRDLEVANSPSFPQRLPPPVFSSPFSLPSEHLTPPLKYLAPDGAWTF
ANLQQNHLMGPGFPYGLPPLPHRPPQNPFVQMQTHQPAVGQEPLQPLSSRTVSSSSLPSL
EEYEPRGPGRPLYQRRISSSSVQPCSEEASTPQDSLAQRKELQDHDNQSPFAFSSPESWV
NATSSSPYQNIPCSGSSRPAQPRESAAPPKTVKAPVEHLKPESLEGPGSLDYSVLQHLGQ
FPPLVPAKQIAESASSSSPQGSGGGKPAMSYASALRAPPKPRPPPEQAKKSSDPLSLFQE
LSLGSSAGSNGFYSYFK
NT seq
5814 nt
NT seq
+upstream
nt +downstream
nt
atggaagacagaagagctgagaagtcatgtgaacaagcatgtgagtccctgaagaggcag
gactatgagatggccctccagcactgcacagaggccctcctttctctcggccagtactcc
gtggctgactttacagggccctgtccgctggagatagagagcatcaagatcgagagtctt
ctttatagaattgcctcctttttgcagctgaaaaactatgggcaagctgatgaagattgt
aggcatgtgctgggaggaggactggctgagggggacggcgccttccaggcggtgctctgc
tgcatgcagctggaagggaagctccagcctgtgacccgcattctcgccaagtcgctgacg
ggagagtccctgaatgggatggtaacaaaagatttgacaaggctaaaaacacttctcaca
gaaacagagacagcaactagtaacgtcctctctggatatcatgtggaagacttagaggag
ggatcttgtaatggttggcatttccgcccaccacctaggggaatcacaagcagcgaggaa
tatactttgtgtaaaagatttttagagcggggaatctgtaggtatggcgcgcagtgcact
tcagcacattcccaggaagagctagcagaatggcagaaaagatacgcttcacggttgatc
aaactgaaacagcagaatgagaataaacagctctcaggcagttacatggaaaccttgata
gaaaagtggatgaattcattatctcctgagaaagtgctcagtgagtgtgtggaaggcgtg
aaggtggagcatgaccccggtctgtccgtcaccgtcaacaccaaaaagtcccaccagacc
tggaccttcgctctcacctgtaagcctgcaagaatgctgtgtcgtgtagcattgctttat
gacgctcatcgtcctcattttagtatcattgcaatatctgccggagatagcactacccag
gtatcacaagaagtcccagaaaactgtcaagaatggataggagggaagatggccccaaat
ggattagatcattacgtgtataaagtcgggatagcatttaacacagaaatatttggaact
tttcgccaaaccatagttttcgactttggattggaaccagtactcatgcaaagagtaatg
attgatgcagcttctacagaagatcttgagtacctgatgcatgccaaacaacagctagta
actacagctaaacgttgggattcttcttctaagactgttgtagactttgaacctaatgaa
actactgatttggagaagagccttcttatcagataccaaattcctctctctgctgaccag
ctgtttacccagtccgttttagacaaatcattgaccaagaccaactatcagtcacggttg
catgaccttctttatattgaggagatagcccagtataaggaagtcagcaagttcaatctt
aaagtgcagttgcagattctagcaagcttcatgctcactggagtttctggaggtgcaaag
tatgctcagaatggacaactttttggtcgctttaagcttactgaaacactttctgaagat
actttggctggacggctggtgatgaccaaagtcaatgctgtttatttattaccagtccct
aaagagaagttagtacagacccagggaaccaaagagaaggtttatgaagctactattgaa
gaaaaaacaaaagaatatatatttttaaggatatccagggaatgctgtgaagagcttaat
cttcggcctgattacgacacacaggttgaactccagttccaattgaatcgattgcccctc
tgtgaaatgcattatgcgctagacagggtcaaggacaatggggttttgtttccggacatc
gctatggctccagccataccttggagtcccaacaggcaatgggacgaacagttggatcct
cggctaaatgcaaaacagaaagaggctgttctggccattacaaccccactttcaatacag
ctgcctcctgtcctcatcatcggcccatatgggacaggcaaaacattcactctagctcag
gccgtcaagcacatcctccagcaacaggagaccagcaggattctcatttgcacccattct
aatagtgctgctgatctctacataaaggattatttacatccatatgtagaagcaggcaat
ccccaggcaagacctctcagggtatatttcagaaaccgctgggtgaagactgtccaccca
gttgtgcaccagtactgtctgatctcaagcgcacattccacctttcagatgccacagaag
gaagatattctgaagcaccgagtggtagtggtcacgttgaacacttcccagtacctctgt
cagctggacctcgaccctgggttttttactcacatcttgttggacgaggctgctcaggcc
atggagtgtgaaaccatcatgcctctggcactagcgactcgacacacgcgggtggtcctg
gctggcgaccacatgcagctcagcccttttgtttacagcgagtttgccagggagaggaac
cttcacgtgtcgttacttgatcggctctacgagcactaccctgccgagtttccctgtagg
atcctcctgtgcgagaactaccgctcccacgaagctatcatcaattacacctctgagctc
ttctatgagggcaagctgatggccagtggaaagcaaccagcacacaaggagttctaccca
ctaaccttctttacggcacgaggggaagatgtgcaggagaaaaacagcaccgctttctac
aataatgcggaggtatttgaggtggtggagcgtgtggaagagctgagaaggaaatggccg
gtggcgtggggcaagctggatgacggcagcatcggtgtagtgactccatacgcagaccag
gtgttcaggatccgtgccgagcttcgcaaaaagagattatctgatgttaacgtagaaagg
gtgctcaatgttcaaggaaagcaattcagagttttgtttcttagcacagtacgtacaagg
catacttgtaaacataaacagacaccaattaaaaagaaagagcagctgttagaagattcc
acagaggacttggattatggttttttgtctaactacaagcttctcaacactgccatcaca
agagcacaatcgctggttgccgtggtgggggaccccattgctctgtgctccattgggaga
tgcaggaaattttgggagcggtttattgccctgtgtcatgaaaacagtagcctgcacgga
atcacttttgaacagatcaaagctcagctagaggctttagaactaaagaagacatacgtg
ttgaatccactggcacctgaatttataccccgggctctaagggcacagcacacaggaaac
accaacaaaccgcagcagtcaccccccaaggggaaaagcctccatcatacccagaatgat
catttccagaatgatggaattgttcagcccaatccctctgtgcttattggcaatcctatc
agagcatatactcctccacctcctcttggacctcacccaaatctggggaaatctccaagc
cctgttcaaagaatcgatcctcacactgggacgagtattctttatgtacctgctgtctat
ggagggaatgtcgttatgtccgtgcctttacctgtgccatggacaggataccagggcagg
tttgcggtcgatcctcgaatcattacacaccaggcagcaatggcctacaacatgaacctc
ttacagacgcatggacgtgggtctcctattccttacggcctcgggcaccacccacctgtc
agcgtagggcagccacagagtcagcatcaggagaaagaccaacatgagcaaagtcgaaac
ggtaagagtgatacaaataatcctggccctgaaatcagtaaggttcggacgccggagaag
aaacccgcagaagccaaacagattgatttggaatcaaacccacagaacagaagtcctgaa
tcacgtcctggcatcgtttatcccaatcccaaatttcatcgcaaagataatctcacccca
agacacataaaccttcctctcccggccccccatgcacagtacgccatccccggtcgtcat
tttcatccgctcccccagctcccgagaccacccttcccaattccgcagcagcacgccttg
ctgaatcagcagcagagtaccttgcctgaacagccgagccccgtgcctgcccagcccagt
caggtggcccctcagctgggcccgccgccgcctcagctctcccctgcctacccagccggc
cccggcagcgcttttttcaataacgcggttccccaccgaccacagtccccgcccgcggag
gctgtggttcccgagcagcagcccccacccgtgctgccggagggccacagtcccctgcgg
gccctcgcgcagcccggccccatcctgccttcacctctgaacagcttcccggacgagagc
cccccgggcctgccgatgggggaggctttggatcgtgtgcacgggagcgtggctctggag
accctgaggcagcagcacgtgcggctgcagcagtggggcgagcaccacgcctgcctcagt
cagggtggcctcccgtacccgcaccacccccacccgcacccgcacctccagcaccttccc
cagccgcccgttggactgcctcagcccccagcgagagcggactggaagctccccagcagt
gccgaagatgaagcggaaacaactgactcacggtttcaagacttactcagagaactgtct
aatcgtgagcaaagtgaaacacgggaactagctgaaatgccaccacctcaatcaagactt
ttgcaatatagacaaattcagactaggagcccaccagcagccccctcgcccccgtccagc
gcagaccccagcacccactttccaaacttccctgacagcagcagagacctggaagtggcc
aacagcccgtcgttcccacagcgcctgccgcccccagtgtttagctctcctttctcgttg
ccatcagagcacctcacccctcctctgaaatacctggcacctgatggagcttggactttt
gctaacttacagcagaatcacctgatggggccgggtttcccctacggcctacctccattg
cctcacaggcccccgcagaacccttttgtgcaaatgcagacccaccagcccgctgttggc
caggagccgctccagccgctgtcctctcggacagtgtcgtcctcttcgctccccagctta
gaagagtatgaacccagaggaccgggtcggcccttgtaccaaagaagaatctcatctagc
tcagtgcagccttgttctgaagaagcaagcactcctcaagacagtcttgctcagcgtaaa
gagcttcaggaccatgataaccagtctcctttcgccttttcctccccggagtcctgggtg
aacgccacctcatccagcccctaccagaacattccatgcagtggatccagcaggccagcc
cagcccagagagtcagcagctccacccaagaccgtcaaagcccccgtggagcatctgaag
cctgagagccttgaggggcccggctccctcgactacagcgtgctgcagcatctcggccag
ttccccccgctcgtgcccgccaagcagatcgccgagtcagccagcagcagcagcccgcag
ggctccgggggcggcaagcctgccatgtcctacgccagcgcgctgcgggcccctccaaag
cccaggcctccgcccgagcaggccaagaagagcagcgaccctctgtctctgtttcaggaa
ctcagcctggggagctcagccggcagcaatggcttttactcctattttaagtaa
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integrated database retrieval system
