Capra hircus (goat): 102181525
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Entry
102181525 CDS
T02910
Symbol
TNR
Name
(RefSeq) tenascin-R
KO
K06252
tenascin
Organism
chx
Capra hircus (goat)
Pathway
chx04151
PI3K-Akt signaling pathway
chx04510
Focal adhesion
chx04512
ECM-receptor interaction
chx05165
Human papillomavirus infection
chx05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
102181525 (TNR)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102181525 (TNR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102181525 (TNR)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
102181525 (TNR)
09172 Infectious disease: viral
05165 Human papillomavirus infection
102181525 (TNR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
chx00536
]
102181525 (TNR)
Glycosaminoglycan binding proteins [BR:
chx00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102181525 (TNR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_Tenascin
EGF_TEN
EGF_Teneurin
Ig_DSCAM-DSCAML_C
EGF_2
Pur_ac_phosph_N
FN3_Tor_3rd
Motif
Other DBs
NCBI-GeneID:
102181525
NCBI-ProteinID:
XP_017916116
UniProt:
A0A452DYX2
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Position
16:complement(55057169..55540922)
Genome browser
AA seq
1358 aa
AA seq
DB search
MGADGETVVLKNVLIGVNLILLGSLLKPSECQLEVTMERVQRPAVEEEGGTASYNASSKE
QPVVFNHVYNINVPLDSLCSSGLEASAEHEVSTEDEVLTEYTGQTSDHESQVTFTHRINL
PKKACPCASSAQVLQELLSRIEMLEREVSVLRDQCTSNCCPESAATGQLDYIPHCSGHGN
FSLESCGCICDQGWFGKNCSEPYCPLGCSSRGVCVDGQCICDSEYSGDDCSELRCPTGCS
SRGLCVNGECVCEEAYTGEDCSELRCPGDCSGKGACANGTCLCQEGHIGEDCSQRRCPKA
CSGRGHCQEGLCLCEEGYQGPDCSAVAPPEDLRVAGISDRSIELEWDGPMAVTEYVISYQ
PTALGGLQLQQRVPGDWSGVTISELEPGLTYNISVYAVISNILSLPITAKVATHLSTPQG
LRFKTITETTVEVQWEPFSFSFDGWEISFIPKNNEGGVIAQLPSDVTSFNQTGLKPGEEY
IVNVVALKEQARSPPTSASVSTVIDGPTHILVRDVSDTVAFVEWTPPRAKVDFILLKYGL
VGGEGGKTTFRLQPPLSQYSVQALRPGSRYEVWVSAVRGTNESEATTTQFTTEIDAPKNL
RVGSRTATSLDLEWDNSEAEVQEYKVEYSTLAGEQYHELLVPKSIGPTSRATLTDLVPGT
EYGIGISAVMNSQQSVPATMNARTELDSPRDLMVTASSETSISLIWTKASGPIDHYRITF
TPSSGIASEVTVPKDRTSYTLTDLEPGAEYIISITAERGRQQSLESTVDAFTGFRPISHL
HFSHVTSSSVNITWSDPSPPADRLILNYSPRDEEEEMMEVSLDATKRHAVLMGLQPATEY
IVNLVAVHGTVTSEPIVGSITTGIDPPKDITISNVTKDSVMVSWSPPVASFDYYRVSYRP
TQVGRLDSSVVPNTVTEFTITKLYPATEYEISLNSVRGREESERICTLVHTAMDNPADLT
ASNITPTEALLQWKAPVSEVENYVIVLTHFAVAGETILVDGDSEEFQLVDLLPRTHYTVT
MYATSGPLTSGTVSTNFSTLLDAPANLTASEVTRQSALISWQPPRAEIENYILTYKSTDG
SRKELIVDAEDTWIRLEGLLESTDYTVLLQAAQDMERSSITSTAFATGGRVFPHPQDCAQ
HLMNGDTLSGVYTIFLNGELSQKLQVYCDMTTDGGGWIVFQRRQNGQTDFFRKWAEYRVG
FGNLEDEFWLGLDNIHRITSQGRYELRVDMRDGQEAAFASYDRFSVEDSRSLYKLRLGGY
NGTAGDSLSYHQGRPFSTEDRDNDIAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQG
INWYHWKGHEFSIPFVEMKMRPYSHRLVAGRKRRSLQF
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atgggggcagacggggagacagtggtcttgaagaacgtgctcattggcgtcaacctgatc
cttctgggctccttgctcaagccctcggagtgtcagctggaggtcaccatggaaagggtc
cagagaccagcagtggaggaggaaggaggcactgccagctacaacgcatccagcaaggag
cagccggtggtcttcaaccacgtgtacaacatcaatgtgcccctggacagcctctgctcc
tcagggctggaggcctcggccgagcacgaagtgagcaccgaagacgaggtgctgacggag
tacacgggccagacctcggaccacgagagccaagtcaccttcacgcacagaatcaacctc
cccaagaaggcctgcccatgtgccagctcggcccaggtgctacaggagctgctgagccga
attgagatgctggagagggaggtgtcagtgctgcgggaccaatgcaccagcaactgctgc
cctgagagtgcggccacaggacaactggactatatccctcactgcagtggccatggcaac
tttagcctggagtcctgtggctgcatctgcgatcaaggctggtttggcaagaactgctcg
gagccctactgccccctgggctgctccagtcggggcgtgtgtgtggacggccagtgcatc
tgtgacagcgagtacagcggggacgactgctccgagctccggtgcccgacgggctgcagc
tcccgggggctgtgtgtgaacggggagtgtgtctgcgaagaggcctacacgggcgaggac
tgcagtgagctgaggtgccccggggactgttcagggaagggggcctgtgccaacggcacc
tgcctgtgccaggagggccacatcggtgaggactgcagccagcggcggtgtccaaaagcc
tgcagcggccgaggacactgccaggaggggctgtgcctctgtgaagagggctaccagggc
cctgactgctcagcagttgcccctccagaggacttgcgagtggctggtatcagcgacagg
tccattgagctggaatgggacgggccgatggcagtgacggaatatgtgatctcttaccag
ccgacggccctggggggcctccagctccagcagcgggtgcctggagattggagtggcgtc
accatctcagagctggagccaggtctcacctacaacatcagcgtctacgctgtcattagc
aacatcctcagccttcccatcactgccaaggtggccacccatctctccacgcctcaagga
ctccgattcaagacgatcacagagaccaccgtggaggtgcagtgggaacccttctcattc
tccttcgatgggtgggagatcagcttcattccaaagaacaatgaaggaggggtgattgcc
cagctccccagtgatgtcacatccttcaaccagacgggactaaagcctggggaggaatac
attgtcaatgtggtggctttgaaagagcaagcccggagcccccctacctcggccagcgtc
tccactgtcattgatgggcccacgcatatcctagttcgagatgtctccgacaccgtggcc
tttgtggagtggaccccacctcgagccaaagtcgatttcattctcttgaagtatggcctg
gtgggcggggaaggtgggaaaaccaccttccggctgcagcctcccctgagccagtactcg
gtgcaggccctgcggccgggctcccgatacgaggtgtgggtcagcgcagtccgcggaacc
aacgagagcgaggccaccaccacccagttcacaacagagattgatgcccccaagaacctg
cgggttggttcccgcacagcaaccagccttgacctcgagtgggacaacagtgaagcagag
gttcaagagtacaaggttgagtacagcaccttggcaggcgagcagtaccatgagctgctg
gtccctaaaagcatcggaccaaccagcagagccacactcaccgatctggtgcctggcact
gagtatggaattggaatatccgccgtcatgaactcacagcaaagtgtaccagccaccatg
aatgccaggactgaactcgacagtcctcgagacctcatggtgacagcctcctcggaaacc
tccatctccctcatctggaccaaggccagtggccccattgaccactaccgaattaccttt
acgccatcctctgggatcgcctctgaagtcaccgtgcccaaggacaggacctcgtataca
ttgacagatctagagcccggggcagagtacatcatttcaatcacagccgagaggggccgg
cagcagagcctggagtccaccgtggatgccttcacaggcttccgccccatctcccatttg
cacttttctcacgtgacctcctccagtgtgaacatcacctggagtgacccatcccctccg
gcagacagactcattctcaactacagcccccgggatgaagaggaagaaatgatggaggtc
tccctggatgccaccaagaggcatgctgtcctgatgggcctgcagccagctactgagtac
attgtgaatctggtggcagtccatggcacagtgacctctgagcccatcgtgggctccatc
accacaggaattgatcctcccaaagacatcacaattagcaatgtgaccaaggactcagtt
atggtctcctggagccctcccgttgcatcttttgattactaccgagtatcctatcggcca
acacaagtgggacgactggacagctcagtggtgcccaacacggtgacagaattcaccatc
accaagctatacccagctacggaatatgaaatcagcctcaacagtgtgcggggaagggag
gagagtgagcggatctgcactcttgtgcacacagccatggacaatcctgcggatctgact
gcttccaacatcaccccaaccgaagccctgctgcagtggaaggcgcccgtgagcgaagta
gagaactacgtcattgttctcacccactttgcagttgctggagagaccatcctggttgat
ggggacagtgaggaattccagcttgttgacctgcttcctaggacccactacactgtcacc
atgtatgccaccagcgggcctctcaccagtggtaccgtcagtaccaacttctctaccctc
ctggatgctcctgcaaatctgacagctagtgaagtcaccagacaaagtgccctgatctcc
tggcagcctcccagagcagagattgaaaactacatcttgacctacaaatccactgatgga
agccgcaaggagctgattgtggacgcggaggacacgtggatccgactggagggcctgttg
gagagcacagactacacggtgctcctgcaggcagcccaggacatggagcggagcagcatc
acctccaccgccttcgccacagggggccgggtcttccctcatcctcaagactgtgcccag
catttgatgaacggagacactctgagtggggtttacaccatcttcctcaacggagagcta
agccagaagttacaggtgtactgcgacatgaccaccgatgggggtggttggattgtgttc
cagaggcggcagaatggccaaactgattttttccggaaatgggctgagtaccgtgttggc
tttgggaacctggaggatgagttttggctggggctggacaacatacacaggatcacgtcc
cagggccgctacgagctgcgcgtggacatgcgtgacgggcaggaggccgccttcgcctcc
tacgacaggttctccgtcgaggacagcagaagcctgtacaaactccgcctaggaggttat
aacggcaccgcaggggattctctcagctaccatcagggccgcccattctccacggaggac
agagacaatgacatagcagttaccaactgtgccatgtcatacaagggcgcttggtggtat
aagaactgccaccggaccaacctcaatgggaaatacggcgagtccaggcacagtcagggg
atcaactggtaccactggaaaggccacgagttctccatccccttcgtggagatgaagatg
cgcccatacagccaccgtctcgtggcagggagaaaacggcggtccttgcagttctag
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integrated database retrieval system