Capra hircus (goat): 102181707
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Entry
102181707 CDS
T02910
Symbol
TAF1C
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X1
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
chx
Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chx03021
]
102181707 (TAF1C)
Transcription machinery [BR:
chx03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
102181707 (TAF1C)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1C_HB
TAF1C_beta-prop
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
102181707
NCBI-ProteinID:
XP_017917270
UniProt:
A0A452DVI9
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All DBs
Position
18:complement(11868350..11877938)
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AA seq
893 aa
AA seq
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MDFPSSLPPSLFMTGPLGQSDVPDLSFMCSWRDALTLPAFSPQGSQDSAPHVAKALLWEP
DTPGPLPLLPPGPDPWDPGLTAKDLLFRGGYQFRRHPRVVLDVTEQISRFLWNHGDIAFA
PLGRLLLENFKLEGAHSRSKTKTVVSVKRLLQDLGGHQPWGCPWAYLSQRQRRFSILGAP
ILSTSVASLLGELLHEELALRWERLLLDDACTGGALAWVPGRTPGAGQLVYPMGSAMDTL
CFQKVSLTPESEPQVLRDLGRIQLRGPVRQVVTRSVQGEALLAVRSDHHCALWKVSTQGQ
PAPLQVLQVDKGATGISLSPHLPGELVICSRSGAVCLWSAEDRLRQIYKDPETLVFRDPS
PWRWADFTAHPRVLTVGDRTGVKMVDTQGPLGCGLLLFRGGAEAACQKGERVLLTQHLGD
LGPESLHPMLHLVCTQFSLYLMDERLPLVPLLKWNHGLHSAPLLARLLPPPSPGLPQPLL
LAGQGGELQLLHLAGVGASTPRLAGLPQSLPTRSDSLSAFPLLEPKSHRRLQERLKAPSI
GLVAAIPPPTSTPVLSLFQLSAAGDVFHQRLHLRADPGPNARAPAASWTPQAAACCSRWL
EALLEVPLAPPVWAAPTFSHRRLLGGFEPQKVEGPVPEGFRRAMAQGRLLQRRDLGLLPP
EERPPAPEPGPEDELSERLEAAWEFGAAAWWERQQGGRTGPRKQPKRHKRRTQLSSTFSS
LSGRVDLSDAASPPPSPDHTLPEARPQPPRTPPSQELTQEPWAQGIPSERQQTLRDYMAE
LPLCTDTPGGASALSSQTPSVRATPSRQHAPQDSRIQQLPRGDTPEGTTLLSSQTPSVRA
TPSRQHTPRDGIVQQLPRGDTPEGATPPSSQTPSVLATRSSSQRLRKKPRMGF
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggacttccccagctccctcccaccctcgttgttcatgactggcccccttggtcagagc
gatgtccctgacctgtcgttcatgtgcagctggagagacgcgctgaccctgccggcgttc
tcaccccaaggctctcaggacagcgcgccgcatgtggccaaggccctgctctgggagcct
gacacgcctgggcccctgcccttgctgcctcctggtcccgatccctgggaccccggcctg
actgccaaagatctgcttttccggggaggctaccagttccggagacatccccgagtcgtg
ctggatgttactgagcagatcagccggttcttgtggaaccacggagacatagcctttgca
cccctggggaggctactgctggagaatttcaaactggaaggagcacatagccgctctaag
acgaagacagtggtcagtgtgaagaggctactccaggacctcggtggacaccagccctgg
ggctgtccctgggcttacctcagccagcgccagcgccggttctccatccttggggccccg
atcctgagcacgtcagtggcgagcctcctgggagagctgctgcacgaggagctggccctg
cgctgggagcggctgctcctggatgacgcctgcaccgggggtgcactggcctgggtgccc
ggcaggacccccggggctgggcagctggtctaccccatgggcagtgccatggacacactg
tgtttccagaaggtcagtctgaccccagagagcgagccccaggttctcagagaccttggc
cgtatccagctccggggacctgtccggcaggtggtgacccgcagcgtgcagggagaagct
ctgctggctgtccgctctgaccaccactgtgccctgtggaaggtcagtacgcaggggcag
ccggcccctctccaggtgctgcaggtggacaagggggccacagggatcagcctcagccct
cacctgcccggagagctggtcatctgcagccgctctggagccgtctgcctgtggagcgcc
gaagacaggctgcggcaaatctacaaggaccccgagaccctggtgttccgggacccttct
ccctggcgctgggcagacttcaccgcccaccctcgagtgctgacggtgggtgaccgcact
ggagtgaagatggtggacactcagggcccgctgggctgtggtctgctgctttttcgtgga
ggggcagaggcggcgtgccagaaaggagagcgagtcctgctcacccagcacctgggggat
ctcggccccgagtctctgcaccccatgctccacctcgtctgcacccagttctccctctac
ctgatggatgagcgcctccccttggtgcccctgctcaagtggaaccatggcctccactct
gcgcccctgctggcccggctgctgccgccgccgagcccaggcctcccccagccgctgctc
ttggccggccaaggcggggagctgcagctgctgcacctcgcaggagtgggggcctccaca
ccccggctggcggggctcccccagtctctccccaccaggagcgactccctctcggccttc
cccctgctggagcccaagagtcaccggcggctgcaagagcgtctgaaagcgccctccata
ggtctggttgctgccatcccgccccccacctccacaccagtgctgtcgctcttccagctt
tctgcagccggagatgtcttccaccagcgcctccacctccgggcagaccccgggcccaat
gctcgtgcccccgcagcttcctggacaccccaggccgctgcctgctgcagccggtggctg
gaggccctgctggaggtgcccctggctcccccggtatgggcggcacccaccttctcccac
cggcggctgctgggaggcttcgagccacagaaggtggaggggccggtgcctgagggtttc
cgtagggccatggcccaggggcggctcctacagcggagagacctgggcttgctccccccg
gaggagcggccccccgcccccgagcctggccccgaggatgagctcagcgagcgtctggag
gcagcctgggagttcggggcggcggcctggtgggagaggcagcagggcggccgcaccggg
cccaggaagcagcccaagcggcacaagcgccggactcagctgtccagcaccttctcctcc
ctcagcggccgtgtggacctctcggacgccgccagccccccgcccagcccagaccataca
ctgcccgaggccaggccccagcccccaaggaccccgccctcccaggagctcacgcaggag
ccctgggcccagggcatcccctcagagcggcagcagaccctccgggactacatggctgag
ctgccgctctgcacggacaccccaggaggggcctctgcgctctcctcccagacccccagt
gtccgggccacgccctccaggcagcacgccccccaggacagcaggatccagcagctgccc
cgaggggacaccccagagggcaccaccctgctctcctcccagacccccagtgtccgggcc
acgccctccaggcagcacaccccccgggatggcatagtgcagcagctgccccgaggggac
accccagaaggcgccaccccgccctcctcccagacccccagcgtcctggccacacgctcc
agctctcagcggctccggaagaagccccgcatgggcttctga
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