Capra hircus (goat): 102181789
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Entry
102181789 CDS
T02910
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
chx
Capra hircus (goat)
Pathway
chx04014
Ras signaling pathway
chx04015
Rap1 signaling pathway
chx04020
Calcium signaling pathway
chx04024
cAMP signaling pathway
chx04080
Neuroactive ligand-receptor interaction
chx04082
Neuroactive ligand signaling
chx04713
Circadian entrainment
chx04720
Long-term potentiation
chx04724
Glutamatergic synapse
chx05010
Alzheimer disease
chx05014
Amyotrophic lateral sclerosis
chx05016
Huntington disease
chx05017
Spinocerebellar ataxia
chx05020
Prion disease
chx05022
Pathways of neurodegeneration - multiple diseases
chx05030
Cocaine addiction
chx05031
Amphetamine addiction
chx05033
Nicotine addiction
chx05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
102181789 (GRIN1)
04015 Rap1 signaling pathway
102181789 (GRIN1)
04020 Calcium signaling pathway
102181789 (GRIN1)
04024 cAMP signaling pathway
102181789 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102181789 (GRIN1)
04082 Neuroactive ligand signaling
102181789 (GRIN1)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
102181789 (GRIN1)
04720 Long-term potentiation
102181789 (GRIN1)
09159 Environmental adaptation
04713 Circadian entrainment
102181789 (GRIN1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
102181789 (GRIN1)
05014 Amyotrophic lateral sclerosis
102181789 (GRIN1)
05016 Huntington disease
102181789 (GRIN1)
05017 Spinocerebellar ataxia
102181789 (GRIN1)
05020 Prion disease
102181789 (GRIN1)
05022 Pathways of neurodegeneration - multiple diseases
102181789 (GRIN1)
09165 Substance dependence
05030 Cocaine addiction
102181789 (GRIN1)
05031 Amphetamine addiction
102181789 (GRIN1)
05033 Nicotine addiction
102181789 (GRIN1)
05034 Alcoholism
102181789 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
chx04040
]
102181789 (GRIN1)
Ion channels [BR:
chx04040
]
Ligand-gated channels
Glutamate (ionotropic)
102181789 (GRIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
DUF6724
Motif
Other DBs
NCBI-GeneID:
102181789
NCBI-ProteinID:
XP_017911735
LinkDB
All DBs
Position
11:complement(106077938..106106343)
Genome browser
AA seq
1055 aa
AA seq
DB search
MSTMRLLTLALLFSCSFARAACDPKIVNIGAVLSTRKHEQMFREAVNQANKRHGSWKIQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFYRIPVLG
LTTRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYSWNHVILLVSDDHEGRAAQKRL
ETLLEERESKSKKRNYENLDQLSYDHKRGPKAEKVLQFDPGTKNVTALLMEARELEARVI
ILSASEDDAATVYRAAAMLNMTGSGYVWLVGEREISGNALRYAPDGIIGLQLINGKNESA
HISDAVGVVAQAVHELLEKENITDPPRGCVGNTNIWKAGPLFKRVLMSSKYADGVTGRVE
FNEDGDRKFANYSIMNLQNRKLVQVGIYNGTHVIPNDRKIIWPGGETEKPRGYQMSTRLK
IVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVICTGPNDTSPGSPRHTVPQCCYGFC
IDLLIKLARTMNFTYEVHLVADGKFGTQERVGVVPRSRRRTGACSLEGLRRAGPEPGRSL
EWVTHEMGRGGSLSGEWGPRCPRPHRRVAPQVNNSNKKEWNGMMGELLSGQADMIVAPLT
INNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLY
LLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGEATPGQGPVPPRRPPR
ADGPLPAGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRN
PSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSA
VLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVR
YQECDSRSNAPATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAA
VNVWRKNLQDRKSGRAEPDPKKKATLRAITSTLASSFKRRRSSKDTVRGRAPSPTCPTLP
SPPCLCPVRQARPRHPTIRLRPRGPSALTAARPAH
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgcgcctgctgactctcgccctgcttttctcctgctccttcgcccgcgcc
gcctgcgaccccaagatcgtcaacatcggcgcggtgctgagcacgcggaagcacgagcag
atgttccgcgaggctgtgaatcaggccaacaagcggcatggctcctggaagatccagctc
aacgccacctccgtcacccacaagcccaacgccatccagatggccctgtctgtgtgcgaa
gacctcatctccagccaggtctacgccatcctagttagccacccacctacccccaacgac
cacttcacacccacccccgtctcctacacagccggcttctaccgcatccccgtcctgggg
ctgaccacgcgcatgtccatctactcagacaagagcatccacctgagcttcctgcgcacc
gtgccgccctactcccaccagtccagcgtctggttcgagatgatgcgcgtctacagctgg
aaccacgtcatcctcctggtcagcgacgaccacgaagggcgggcggcccagaaacgcctg
gagacgctgctggaggagcgcgagtccaagagtaaaaaaaggaactatgaaaacctcgac
caactgtcctatgaccacaagcgcggacccaaggcggagaaggtgctgcagttcgacccg
gggaccaagaacgtgacggccctgctgatggaggcgcgggagctggaggcccgggtcatc
atcctctccgccagcgaggacgacgctgccaccgtgtaccgcgcagccgcgatgctgaac
atgacgggctcggggtacgtgtggctggtgggggagcgcgagatctcggggaacgccctg
cgctacgccccggacggcatcatcgggctgcagctcatcaacggcaagaacgagtcggcg
cacatcagcgacgccgtgggcgtggtggcccaggccgtgcacgagctactcgagaaggag
aacatcaccgacccgccgcggggctgcgtgggcaacaccaacatctggaaggccgggccg
ctcttcaagagggtgctgatgtcttccaagtacgcagacggggtgaccggccgcgtggag
ttcaatgaggacggggaccggaagtttgccaactacagcatcatgaacctgcagaaccgc
aagctggtgcaagtgggcatctacaacggcacgcacgtcattcccaacgacaggaagatc
atctggccgggcggagagaccgagaaaccgcgcggctatcagatgtccaccaggctgaag
atcgtgacgatccaccaggagccctttgtgtatgtcaagcctacgctgagcgacggcacg
tgcaaggaggagttcaccgttaacggggacccggtcaagaaggtgatctgcaccgggccc
aatgacacgtcgccgggcagcccgcgccacactgtgcctcagtgctgctacggcttctgc
atcgatctgctcatcaagctggcgcggaccatgaacttcacttatgaggttcacctggtg
gccgacggcaagttcggcacgcaggagcgggtaggagtggtccctaggagccggcgcagg
accggggcctgctccctggagggtcttcggcgggcggggcctgagcctgggaggagtctg
gagtgggtgacccatgagatgggtcggggtgggagcctgtctggggagtggggtccgcgg
tgtccgcgtccccaccggcgggtcgccccacaggtgaacaacagcaataaaaaggaatgg
aacgggatgatgggcgagctgctcagcgggcaggcggacatgatcgtggccccgctgacc
atcaacaacgagcgcgcgcagtacatcgagttctcaaagcccttcaagtaccagggcctg
accattctggtcaagaaggagatcccccggagcacgctggactcgttcatgcagcccttc
cagagcacgctgtggctgctggtggggctgtctgtgcacgtggtggccgtgatgctgtac
ctgctggaccgcttcagccccttcggccggttcaaagtgaacagcgaggaggaggaggag
gatgcgctgaccctgtcttcggctatgtggttctcctggggcgtcctgctcaactcaggc
atcggggaaggtgaggcgacgccaggccagggccccgtcccgccccgccgcccgccccga
gctgacggtcctctgcccgcaggcgcccccagaagcttctcggcgcgcatcctgggcatg
gtgtgggcggggttcgccatgatcattgtggcatcctacaccgccaacctggcagccttc
ctggtgctggaccggccggaagagcgcatcaccggcatcaacgacccgcgactgcggaat
ccctcggacaagttcatctacgcgacggtgaaacagagctcggtggacatctacttccgg
cggcaggtggagctgagcaccatgtaccgccatatggagaagcacaactacgagagcgcc
gcggaggccatccaggccgtgcgcgacaacaagctgcacgccttcatctgggactcggcg
gtgctggagttcgaggcctcgcagaagtgcgacctggtgaccacgggcgagctcttcttc
cgctctggtttcggcatcggcatgcgcaaggacagcccctggaagcagaacgtctccctg
tccatcctcaagtcccacgagaacggcttcatggaagacctggacaagacgtgggttcgg
taccaggagtgcgattcgcgcagcaacgcccctgctaccctcaccttcgagaatatggca
ggggtcttcatgctggtggctggaggcatcgtggctgggatcttcctgatcttcatcgag
atcgcctataaacggcacaaggacgcccggcggaagcagatgcagctggcgtttgcggca
gtgaacgtgtggagaaagaacctgcaggatagaaagagtggtagagcagagcccgaccct
aaaaagaaagccacacttagggctatcacctccaccctggcctccagcttcaagagacgt
aggtcctccaaagacacggtaaggggaagagcgcccagtcccacgtgtccgactctcccc
tcgcccccgtgtctgtgtcccgtgcgtcaggcccgccctcgccatcccaccatccgcctc
cgcccgcgtggcccttctgcgctcaccgctgcccgcccggcacactag
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