Capra hircus (goat): 102181918
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Entry
102181918 CDS
T02910
Symbol
ATXN2L
Name
(RefSeq) ataxin-2-like protein isoform X1
KO
K23625
ataxin 2/2L
Organism
chx
Capra hircus (goat)
Pathway
chx05014
Amyotrophic lateral sclerosis
chx05017
Spinocerebellar ataxia
chx05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102181918 (ATXN2L)
05017 Spinocerebellar ataxia
102181918 (ATXN2L)
05022 Pathways of neurodegeneration - multiple diseases
102181918 (ATXN2L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chx03019
]
102181918 (ATXN2L)
Messenger RNA biogenesis [BR:
chx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
102181918 (ATXN2L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
DUF5415
Motif
Other DBs
NCBI-GeneID:
102181918
NCBI-ProteinID:
XP_017895676
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All DBs
Position
25:complement(25882230..25894280)
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AA seq
1077 aa
AA seq
DB search
MLKPQPPQQTSQPQPPPTQQAVARRPPGGTSPPNGGLPGPLASTSAPPGPPAAASPCLGP
AAAAGSGLRRGAEGILAPQPPPPQQQHQERPGAAAIGSARGQSTGKGPPQSPVFEGVYNN
SRMLHFLTAVVGSTCDVKVKNGTTYEGIFKTLSSKFELAVDAVHRKVSEPAGGPRREDIV
DTMVFKPSDVMLVHFRNVDFNYATKDKFTDSAIAMNSKVNGEHKEKVLQRWEGGDSNSDD
YDLESDMSNGWDPNEMFKFNEENYGVKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQLA
REIESSPQYRLRIAMENDDGRTEEEKHSAVQRQGSGRESPSLAAREGKYIPLPQRVREGP
RGGVRCSSSRGGRPGLSSLPPRGPHHLDNSSPGPGSEARGINGGPSRMSPKAQRPLRGAK
TLSSPSSRPSGEASVPPPPAVGRMYPPRSPKSAAPAPISASCPEPPMGSAVPTSSASIPV
TSAVGEPGVGSISPASPKISLAPTDVKELPAKEPGRTLESQELSRIAGKVPGLQNEQKRF
QLEELRKFGAQFKLQPSSSPETSLDPFPPRILKEEAKGKEKEVDGLLASEPLGSPVSSKA
ESVSDKEDKPPLPPAGAAEGPEQPPQPCPSQTGSPPVGLIKGDDKDEGPVAEQVKKSTLN
PNAKEFNPTKPLLSVNKSTSTPTSPGPRTHSTPSIPVLTAGQSGLYSPQYISYIPQIHMG
PAVQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAAAAGPPLV
AATPYSSYIPYNPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNPRMLTSGSHPQAIVSSST
PQYPSAEQPTPQALYATVHQSYPHHATQLHAHQPQPATTPTGSQPPSQHAAPSPVQHQAG
QAPHLGSGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAIHAHQQLPHGFT
NMAHVTQAHVQTGITAAPPPHPGAPHPPQVMLLHPPQSHGGPPQGAVPQSGVPALSASTP
SPYPYIGHPQGEQPGQAPGFPGGADDRIREFSLAGGIWHGRADGLQVGQDARVLGGE
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagcctcagccgccacaacagacctcccagccccagccgccccccacgcaacag
gccgtggcccgtcgccctcccgggggcaccagcccgcccaacggcggtctcccggggccc
ctggcctccacctcggctcccccaggacctcctgcggccgcctccccctgcctggggcct
gcagccgctgccgggagcgggctccgccggggagccgagggcatcttggcgcctcaaccg
ccgccaccgcagcagcaacatcaggagaggccaggggcagcggccatcggcagcgccagg
ggacaaagcacaggaaagggacctccacagtcaccggtgtttgagggtgtctacaacaat
tccagaatgctgcatttcctaaccgctgttgtgggttccacttgtgatgtaaaggtgaag
aacggtaccacctacgagggtatcttcaagacgctgagctcaaagtttgaactggcagtg
gacgctgtgcaccggaaggtatcggagccggcaggtggccctcgtcgggaagacatagtg
gacaccatggtgtttaagccaagtgatgtcatgcttgtccacttccgaaatgtcgacttc
aattatgctactaaagataagttcactgactcggccattgccatgaactcaaaggtgaac
ggggagcacaaggagaaggtgcttcagcgctgggaggggggagacagcaacagcgatgac
tacgacctggagtctgacatgtctaatggatgggaccccaacgaaatgttcaagttcaat
gaggagaactatggtgtaaagaccacctatgacagcagtctctcttcttacacggtgccc
ttagagaaggacaattcagaagaattccgtcagcgggagctgcgtgctgcccagttggcc
cgagagattgaatcgagcccccagtaccgcctgcggatcgccatggagaatgatgatggg
cgcacggaggaggagaagcacagtgcggttcagcgacagggctcagggcgtgagagcccc
agcttggcagccagggagggaaagtatatccctctaccccagcgagttcgggaaggtccc
cggggaggcgttcgctgcagtagttctcggggcggccggcctggccttagctctttgcca
ccccgtggccctcaccatcttgacaatagcagccctggcccaggttctgaggcacgtggt
atcaatggaggcccttcccgcatgtcccctaaggcccagcgacctctgagaggtgccaag
actctgtcttcccccagtagcaggccttctggagaagcctctgttccacctcctcctgca
gtgggccggatgtacccgccgcgctctcccaagtcagctgcccctgccccaatctcagct
tcctgtcctgagcctcccatgggctcagcagtaccaacctcttcagcttccatcccagtg
acatcagcagttggggaacctggagtaggctccatttccccagcttctccaaagatctca
ctggcccccacagatgtaaaagaactcccggccaaggaacctggaaggaccctggagtcc
caggagttgtcccggattgcagggaaagtccctggccttcagaacgaacagaagcgtttt
caactggaagaactgagaaagtttggggcccagtttaagcttcagcccagtagctcccct
gagaccagcttggatccttttcctccacggatcctgaaagaggaagccaaagggaaggag
aaggaggtggatggtcttttggcgtcagagcccctggggtctcctgtttcctcaaaggct
gaatcagtatcagacaaggaggacaaaccacccctgccaccagcaggggctgccgagggg
ccggagcagcctccccaaccttgcccaagccaaactggcagccccccagtgggcctcatc
aagggagatgacaaggatgagggcccagttgccgaacaagtgaagaagtcaacattgaac
cccaatgccaaggagttcaaccctactaagcccctgctctctgtgaataaatccaccagt
actccaacttctcctgggccccgaactcactcaactccctccatcccggtgctgacagca
ggccagagtgggctctatagcccccagtacatctcctacatacctcagatccacatggga
ccagctgttcaggcaccgcagatgtatccgtatcctgtgtccaactcagtgcctggacag
cagggcaagtaccggggcgccaaaggctccctgcccccgcagcgctcggaccaacaccag
ccagcctccgcccctcccatgatgcaggctgccgccgccgccgccggtccacctctggtg
gccgctaccccttactcttcctacatcccctacaacccacagcagttcccaggccagccc
gccatgatgcagcccatggcccactacccctcgcagccggtgtttgcccccatgcttcaa
agcaacccacgcatgctgacgtcggggagccatccccaggccatcgtgtcatcctccacc
cctcagtacccttctgcagagcagcccaccccccaggccctttatgccactgttcaccag
tcctatccacaccatgccacgcagctccatgcccaccagccgcagccggccaccacacct
actgggagccagccgccgtcccagcatgcggcccccagtcctgtccagcaccaggcgggg
caggccccacacctgggcagtggacagccgcagcagaacctgtaccacccaggggccctg
acaggcacaccgccttctctgccaccgggaccttctgcccagtcccctcagagcagcttc
ccccaaccagccgctgtatatgccatccatgcccaccagcagctgccccacggcttcacc
aatatggcccatgttacccaggcccatgtccaaactggaatcacagcagccccgccccct
caccctggggctccccacccgccccaggtgatgctgctgcacccaccccagagccatggg
ggccccccccaaggcgcggtgccccagagtggggtgcctgcactctcagcttccacaccc
tcaccctacccctacatcggacacccccaaggtgagcagcctggccaggcgcctggattt
ccaggaggagccgatgacaggattcgtgagttctcgttagctgggggtatttggcatgga
agagctgatgggctgcaggtggggcaggatgcacgggttctgggtggggagtga
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