Capra hircus (goat): 102182001 Help Entry 102182001         CDS       T02910                                  Symbol SMARCC1 Name (RefSeq) SWI/SNF complex subunit SMARCC1   KO K11649   SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C Organism chx  Capra hircus (goat) Pathway chx03082   ATP-dependent chromatin remodeling chx04714   Thermogenesis chx05225   Hepatocellular carcinoma Brite KEGG Orthology (KO) [BR:chx00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     102182001 (SMARCC1)  09150 Organismal Systems   09159 Environmental adaptation    04714 Thermogenesis     102182001 (SMARCC1)  09160 Human Diseases   09162 Cancer: specific types    05225 Hepatocellular carcinoma     102182001 (SMARCC1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:chx03021]     102182001 (SMARCC1)    03036 Chromosome and associated proteins [BR:chx03036]     102182001 (SMARCC1) Transcription machinery [BR:chx03021]  Eukaryotic type   RNA polymerase II system    Coactivators     BAF/PBAF complex      102182001 (SMARCC1) Chromosome and associated proteins [BR:chx03036]  Eukaryotic type   Chromatin remodeling factors    BAF complex     102182001 (SMARCC1)    PBAF complex     102182001 (SMARCC1)    GBAF(ncBAF) complex     102182001 (SMARCC1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SWIRM-assoc_2 SWIRM-assoc_3 SWIRM-assoc_1 SWIRM Myb_DNA-binding Myb_DNA-bind_6 HEAT_GCN1 BRCT_2 Chromo DUF919 SpeFL Motif Other DBs NCBI-GeneID:  102182001 NCBI-ProteinID:  XP_017922601 LinkDB All DBs Position 22:52003931..52126402 Genome browser AA seq 1105 aa AA seqDB search MAAAAGGGGLGTTTGAAGAGGAAAATGLAVYRRKDGGPASKFWESPETVSQLDSVRVWLG KHYKKYVHTDAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGTLCH ILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQSNCLARPNIYLIPDIDLKL ANKLKDIIKRHQGTFTDEKSKASHHVYPYPSSQEDEEWLRPVMRKDKQVLVHWGFYPDSY DTWVHSNDVDAEIEDPPIPEKPWKVHAKWILDTDVFNEWMNEEDYEVDENRKPVSFRQRI TTKNEEPVRSPERRDRKASANARKRKHSPSPPPPTPTESRKKSGKKGQASLYGKRRSQKE EDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDEQDEETVTTGG KEDEDPGKGDQSRSVDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNK SKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVD PESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQIPAAQQMLNFPEKNKEKPIDLQNFG LRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILH FLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALE EFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEK METDTDAQQPEKAENKGENETDEGDKAQDGENEKNSEKEQDSEVSEDTKSEEKEAEENKE LTDSCKERESDVGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLV ETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQ QQHGPNPQQAHQHSGGPGLAPLGAAGHPGMMPHQQPPPYPLMHHQMPPPHPPQPGQIPGP GSMMPGQPMPGRMMPTVAASIHPPGGGPTPPGMPPIPGNILGPRVPLTAPNGMYPPPPQQ QPPPPAPADGGPPPPAPGPPASAAP NT seq 3318 nt NT seq  +upstreamnt  +downstreamnt atggccgcggcggcgggcggcggagggctggggacgacgaccggcgccgcgggcgcagga ggcgcggcggcggccacgggcctggccgtttatcggcggaaggacgggggcccggcgagc aagttttgggagagcccggagacggtgtcccagctggattcggtgcgggtctggctgggc aagcactacaagaagtatgttcacacggatgctcctacgaataaaactctggctgggctg gtggtacagcttcttcagttccaggaagatgcctttgggaagcatgtcaccaacccggcc ttcaccaagctcccggcaaaatgtttcatggatttcaaagctggaggcaccttgtgtcac attcttggggctgcttacaaatacaaaaatgaacagggatggcggaggtttgatctgcag aatccatcccgaatggatcgtaatgttgaaatgtttatgaacattgaaaaaacattggtt cagagcaattgtctggccagacccaacatctacctcattccagacattgatctgaagttg gccaacaaattgaaagatataatcaaacgacatcagggaacatttactgatgagaagtca aaagcttcccaccacgtttacccatatccttcctcacaagaggatgaagagtggttgaga cctgtgatgagaaaagacaagcaggtgttggtgcactgggggttttaccctgacagctat gatacttgggtccatagtaatgatgttgatgcagaaattgaagatccaccgattccagaa aaaccatggaaggttcatgcaaaatggattttggacactgatgttttcaatgaatggatg aatgaggaggattatgaggtggatgagaacaggaagcccgtgagttttcgtcagcgaatt acaacaaagaatgaagagccagtcagaagtccagagagaagagatagaaaagcgtcagct aatgctcgaaaaaggaaacattcaccttcccctccgcccccgacacccacagaatcccgg aagaagagtgggaagaaaggccaagctagtctttatgggaagcggagaagtcagaaagag gaagatgagcaagaagatcttaccaaggacatggaagacccaacacctgtacccaacata gaggaagtggttcttccaaaaaatgtaaacccaaagaaagatagtgaaaatacacctgtt aaaggaggaactgtggcagatctagatgagcaggatgaagaaacagtcacgacaggagga aaggaagatgaagatcctggcaaaggtgatcagagtagatccgttgaccctggtgaagat aatgtgactgagcagaccaatcacattattattcctagctatgcatcgtggtttgattat aactgtattcatgtgattgaacggcgtgctcttcctgagtttttcaatggaaaaaacaaa tccaagaccccagagatatacttggcatatcgaaatttcatgattgacacataccgccta aatccccaagaatatttaaccagcactgcttgtcggagaaacttaactggagatgtgtgt gctgtgatgagggttcatgcctttttagaacagtgggggcttgttaattaccaagtggat ccagaaagtcgacccatggcaatggggcctcctccaactcctcatttcaatgtgttagct gataccccttcggggcttgttcctctacatcttcgatcacctcagattcctgctgctcag cagatgttaaattttcctgagaagaacaaggaaaaaccaattgatttgcagaactttggt cttcgtactgacatctactccaagaaaaccttagcaaagagtaaaggtgctagtgctgga agagaatggactgaacaggagactctgctactcttggaggctctggagatgtataaagat gattggaacaaagtgtcagagcacgttggaagtcgcactcaggatgaatgcatccttcac ttcttgaggcttcctattgaggacccataccttgagaattctgatgcttccctggggccc ctggcctaccagcctgtccccttcagtcagtcgggaaacccagtcatgagcacggttgct tttttggcatctgtggtggatcctcgtgtggcatctgctgcagccaaagcagctttggag gaattttctcgggtccgggaggaggtgcccctggagttggtggaggctcatgtcaagaaa gttcaagaagcagcccgagcctccgggaaggtggatcccacctacggcctggagagcagc tgcattgcaggcacggggccagatgagccagagaagctggaaggagctgaagaggaaaaa atggaaacagatactgatgctcagcagcctgaaaaggcagaaaacaagggggaaaatgaa acggatgaaggtgataaagcacaagatggagaaaatgaaaaaaacagtgaaaaggaacag gatagtgaagttagcgaggataccaaatcagaagaaaaggaggctgaagagaacaaggaa ctcactgattcttgtaaagaaagagaaagtgatgttgggaagaagaaagtagaacatgaa atttctgaaggaaacgtagccacagccgcagcagctgctcttgcctcagctgcaacgaaa gccaagcacctggctgccgtggaagagagaaagatcaagtctctagtagctcttctggtt gagacacaaatgaagaaactggagattaaacttagacattttgaagaactagaaactatc atggacagagagaaagaagctttagaacaacagaggcagcagttgcttacggagcgccag aacttccacatggagcagctgaaatacgctgagttgcgagcccgacagcaaatggaacag cagcagcatgggccgaaccctcaacaggcacaccagcactcaggaggacccggcctggcg ccgctgggagcagcaggacatcccggcatgatgcctcatcagcagccccctccctaccct ctgatgcaccaccagatgccgccgcctcatccaccccagccaggtcagataccaggccca ggttccatgatgcctgggcagcccatgccaggccgcatgatgcccaccgttgcagccagc atccacccccctgggggtggccccacccctcctggtatgcctccaatcccaggaaacatc ttaggaccccgggtacccctcacggcacctaacggcatgtatccccctccgccgcagcag cagccaccacctccagcacctgcggacggaggccctccacctcccgctcctggcccacca gcctcagctgcgccgtag

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