Capra hircus (goat): 102182606
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Entry
102182606 CDS
T02910
Symbol
LMO7
Name
(RefSeq) LIM domain only protein 7 isoform X3
KO
K06084
F-box protein 20
Organism
chx
Capra hircus (goat)
Pathway
chx04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
102182606 (LMO7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
chx04121
]
102182606 (LMO7)
Ubiquitin system [BR:
chx04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
102182606 (LMO7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
102182606
NCBI-ProteinID:
XP_005687721
LinkDB
All DBs
Position
12:complement(35494061..35715639)
Genome browser
AA seq
1608 aa
AA seq
DB search
MEEAEADCALAFAEAQRWVEAVTEKNFETKDFRASLENGVLLCDLINKLKPGVIKKINRL
STPIAGLDNINVFLKACEQIGLKEAQLFHPGDLQDLSNRVTVKQEETDRRVKNVLITLYW
LGRKAQSNPYYNGPCLNLKAFENLLGQALTKALEESSCLKRSGRDSGYSDIWGPERGELL
ASPGNCKREDSFESLDSLGSRSFTSCSSDITLRGAREGCESDTDSEFTFKMQDHNKDDMS
YRRISAIEPKSALPFNRFLPSKSKQPSYVPAPLRKKKLDKNEDNRRSWASAVYTEADGTF
PSNERRTWGTNVENWPTVQETSDSSCYLEENENKTSVPNTVKDDLYVRKLSPVMPSPGNA
FDQFLPKCWIPEDVNWKRIKRETYKPWYKEFQGFSQFLLLQALQTYSDDILSSETNTKID
PTAGPRLITRRRNLSYAPGCGPGDALEMPVLDPDLENDDFFVRKTRAFHANPCILRAFED
LRSLSGQDDPVERDIILQCREGELVLPDLEKDDMIVRRIPAQKTEVPLSGGPDRYQPVPL
PEPWMLPPEIQAKFLCVLERTCPSKEKSTSCRVLVPSCRQKKDDMLARKIQSWKLGTTVP
PVSFTPGPCSEADLQKWESIREASRLRHRKRLMVERLFQKIYGENGSKSLSDVSAEDIQS
LRQLRYEEMQRIKSQLKEQDQKWQDDLAKWKDRRKSYTSDLQKKKEEREEIEKQALEKSE
RRSKTFNEMLQDRESQNQMSTVASRRRLYSFDDGLNEEKLPPVLPMPEAYSQSERAEEKG
TAYPTEIPKQDSTTFAKREVTAEVRFPSRSPVEEQRPASLSSQHSLNTQMELTRVSATLP
RSYQKTDAARLTSVVTPRPFGSQSRGISSLPRSYTMDDSWKYNGDIEGVKRTQSSSISIS
VQRPDTSQLASGSSSEREAEAPRESVMRLPSPTPPYSSLSQDQAATSKDTLSSISSPDLT
SELGEGRSSPQAEVPRSQDQFSDMRISINQTPGSSLDFGFTVKWAFSRIFVASVEAGSPA
EFSQLQVDDEIIAINNTRFSYKDTKEWEETMAKAQETGSLVMDIRRYGKSGSPETKWIDA
TSGIYSSDKASTLSVTTDFSESLQSSNTESKEINGIRDESSTFESKASEPISLKNLKRRS
QFFEQGSSDSVVPDLPVPTISAPSRWAWDPEEERRRQERWQKEQDRLLQEKYQREQEKLR
EEWQRAKQEAERENSKYLNEELMVLNSNSISLMAREPALATRGEESKSSDKEGTRAEEQM
RHQEQEEDANEDQRKKLQEQLTLEREQKLKEQQYQEEQQQKRREAEEQKHQAEKERETSI
KIYQYRRPIDSYDIPKREEESSELLPSDRNKSRSTTELDDSPTNKNGSNRYADRSGSSSS
SQKSSKKEPAPSGAELERQQILQEMRKRTSLYDDNSWIRQRSSSVNKEPICLPGVMRRGE
SLDNLDSPRTNSWRQSPWFSQPSGVYASSSVQDFSRPPPQLLSTSNRAYMRNPSSSIPPP
SAGSVKTTTPSPIPRSHSPAAPQPGSQPRNRSVSGKRVCSYCHNILGKGAAMIIESLGLC
YHLHCFKCVACERDLGGSSSGAEVRIRNNQLYCNDCYLRFKSGRPTAM
NT seq
4827 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggcggaggccgattgcgccctggcgttcgccgaggcccagcgatgggtggag
gcagtaacagagaagaattttgaaacaaaggattttcgagcctctctagagaatggtgtt
ctgttgtgtgatttgattaataagctgaaacctggggtcattaagaagatcaacagactg
tccacacctatagcaggcttggataatataaacgtttttttgaaagcttgtgaacagatt
ggattgaaagaagcccagcttttccatcctggggatctacaggatttatcaaatcgagtc
actgtcaagcaagaagagactgataggagagtgaaaaatgttttgataactttgtactgg
ctggggagaaaagcacaaagtaacccctactataatggtccctgtcttaatttgaaagcg
tttgagaatcttttaggacaagctctgactaaggcacttgaagagtccagctgcctgaag
aggagtggcagggacagtggttacagcgacatctggggccctgagcgcggggagcttctg
gcttctccaggcaactgtaagagggaggactcgtttgagagcttggactctttgggatca
aggtcattcacaagctgctcctctgatatcacgttgaggggggcacgtgaaggttgtgaa
agtgacacagattctgaatttacattcaaaatgcaggaccataataaagatgatatgtcc
tatagaaggatttcggctattgaacccaagtctgccttacccttcaatcgctttttaccc
agcaagagtaaacagccatcgtacgtgccggcacctttgaggaagaaaaagctggacaaa
aatgaggataacagacgaagctgggcaagtgccgtctacacagaagcagatggaacattt
ccaagtaacgagaggagaacttggggcacgaacgtggagaactggccaacagtacaagaa
acttcagactcctcttgttatttggaagagaacgaaaacaagacaagcgttcccaacact
gtaaaggatgatctttacgtgcgaaagctaagcccagtcatgccaagcccagggaacgct
tttgatcagtttctccccaaatgctggatcccagaggatgtgaactggaaacgtataaaa
agggaaacttacaaaccgtggtataaagaatttcagggattcagtcagtttttattactt
caggccctccagacatattctgatgacatcttgtcttctgaaacaaataccaaaatcgac
cccacggctggcccccggctcataacacgcagaaggaacctctcttacgcaccagggtgt
ggaccgggagatgccctggagatgccagtcctggatcccgacttagagaatgatgacttc
tttgtcagaaagactagggctttccatgcaaacccatgtattctccgggctttcgaagac
ttaagaagtctgtctgggcaagacgatcctgtagagcgagatataatcctgcagtgtagg
gaaggggaacttgttcttccggacctcgaaaaagatgatatgattgttcgccgcattcca
gcacagaagacagaggtgcctctgtcaggaggccctgatagataccagccagtcccattg
cccgaaccctggatgcttcctccagaaattcaagcaaaatttctctgtgtgcttgaaagg
acatgcccctcgaaagaaaaaagtactagctgtagagtgttagttccttcctgtaggcag
aagaaagacgacatgttggctcgtaagatccagtcttggaagctgggaaccactgtccct
cccgtcagtttcacccctggtccctgcagcgaggcggacttacagaagtgggagtccatc
cgagaggccagcaggcttaggcacaggaagcggctgatggtggagagactctttcaaaag
atctatggtgagaacgggagtaagtccttgagtgatgtcagcgcagaggatattcagagc
ttgcgtcagctacgttacgaggagatgcagagaatcaagtcccagttaaaagaacaggac
cagaaatggcaggatgaccttgcaaaatggaaagatcgtcggaaaagctacacttcggat
ctgcagaagaaaaaggaggagagggaggagattgagaagcaggctcttgagaagtcggag
agaagatctaagacatttaacgaaatgctgcaggacagggaatcccaaaatcagatgtct
acagttgcatcgagaaggaggctgtattcttttgatgatggattgaatgaagaaaagctt
ccccctgtgctgcctatgccagaagcctattcccagagtgagagagcagaggagaaagga
acggcttatccgacagaaattcctaagcaggattctacaacttttgcaaaaagggaggtc
acagctgaagttcggtttccttctagaagccctgtggaagaacagcgcccagcctctttg
tcatctcagcattcactgaatacacagatggagttgactcgagtttcagcaactctcccc
agaagttaccagaaaaccgatgcggccaggttaacctctgtggtcacaccgagacctttt
ggctctcagtcaaggggaatctcatcactcccgagatcgtatacgatggatgattcttgg
aagtataatggagacatagaaggcgttaagagaacccagagcagttcgatcagcatctct
gtgcaaagacctgacacaagccagcttgcgtccggctcatccagtgaaagagaggccgaa
gcgcccagagaaagtgtgatgcggttgccctctcctacaccaccctactcatctctttcc
caggatcaggctgccacttctaaagacacattgtcttcaatatctagccctgatttaaca
tctgagcttggagaagggagaagctcgccacaggcagaggtccccaggtcacaggatcag
ttcagtgatatgagaatcagcataaaccagacgcctgggagcagtcttgactttgggttt
acagtaaaatgggctttttccaggatcttcgtagcatcagttgaagcaggtagcccagca
gaattttctcagctacaggtagatgatgaaattattgctatcaacaacaccaggttttca
tataaggacacaaaagagtgggaggaaaccatggctaaggcccaggaaactgggagccta
gttatggatatcaggcgctatggaaagtctggttcacctgaaacaaagtggattgatgcc
acttccggaatttacagctcagacaaagcttcaactctgtcagtaacaaccgatttctca
gaaagccttcagagttctaatactgaatcaaaagaaatcaatggaattcgtgatgaaagc
agtacttttgaatcaaaagcctctgaacctatttctttgaaaaacttaaaaaggcgatca
cagttttttgaacaaggaagctccgattctgtggttcctgatcttccagtcccaaccatt
agtgccccaagtcgctgggcctgggatccagaggaggaacggaggcggcaggagagatgg
cagaaggagcaagaccgactgctgcaggaaaaatatcaacgagaacaggaaaaactgagg
gaagagtggcagagggctaagcaggaggctgagagagagaattccaagtacttgaatgag
gagctgatggtcctgaactcaaacagcatttctctgatggcccgggagcctgccctggcc
accagaggtgaggagtccaagtcttctgacaaggaaggaacccgggcagaggagcagatg
cggcaccaggagcaggaggaagatgcgaatgaggaccaaaggaagaagctgcaggaacaa
ctcactcttgagagagagcagaagttgaaggagcagcaatatcaggaagagcagcaacag
aagcggcgtgaagcggaggagcagaagcaccaggcagagaaagagagggaaacttccatc
aaaatataccagtacagaaggcctattgattcctatgacataccaaagagagaagaagaa
tcttcagagttgcttcctagcgacaggaataaatccagatcaactactgaattggatgat
tcccccacaaacaaaaatggaagcaatagatacgcagaccgaagtgggagcagtagctca
tcacagaagagctcgaagaaggaaccagcgccatcaggagcggagttggagagacagcaa
atcctccaagaaatgaggaagagaacctccctttatgacgacaacagctggatccgacag
cgcagttccagtgtcaacaaagagcctatttgtctgcctggggttatgagaagaggtgaa
tctctagataacctggattccccaagaaccaattcttggcgacagtccccgtggttcagt
cagccatcaggagtctacgcctcttcctctgtccaagacttcagtcgccccccacctcag
ctgctgtccacatcaaaccgtgcctacatgcggaacccctcctccagcatcccccctccc
tcagctggttctgtgaagaccaccaccccgtcccccataccgcgtagccattcccctgcg
gctccgcagccaggctcccagccacgcaacaggtcggtcagtgggaagcgtgtgtgctcc
tactgtcataacattctgggcaaaggagctgccatgatcatcgaatccctgggtctttgt
tatcatttgcattgttttaagtgtgtggcctgcgagcgtgacctcggaggctcttcctca
ggagccgaagtcagaatccgaaacaaccagctgtactgcaacgactgctatctcagattc
aaatctggacggccaactgccatgtga
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