Capra hircus (goat): 102182622
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Entry
102182622 CDS
T02910
Symbol
RPGRIP1L
Name
(RefSeq) protein fantom isoform X1
KO
K16550
protein fantom
Organism
chx
Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
chx01009
]
102182622 (RPGRIP1L)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
chx03037
]
102182622 (RPGRIP1L)
Protein phosphatases and associated proteins [BR:
chx01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102182622 (RPGRIP1L)
Cilium and associated proteins [BR:
chx03037
]
Primary cilia and associated proteins
MKS complex
102182622 (RPGRIP1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-C2_1
RPGR1_C
C2
Motif
Other DBs
NCBI-GeneID:
102182622
NCBI-ProteinID:
XP_005692038
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Position
18:complement(23318073..23418624)
Genome browser
AA seq
1270 aa
AA seq
DB search
MSGPADETAGDLPVKDIGLNLFGMGGLQETSTTRTMKSRQAVSRISREELEDRFLRLHDE
NIVLKQHARKQEDKIKRMATKLIRLVNDKKRYEQVGGGPKRLGRDVEMEEMIERLQEKVH
ELERQNEVLKSRLISTKQQLQIQGHRHTPYSYVQSRVNTGRRRVNENAGLQECPRRGIKF
QDTDGAETVQPMPTKYSNSLLKEARGEIRNLENVIESQRGQIEELEHLAEILKTQLRRKE
NEIELSLLQLREQQATDQRSNIRDNVEMIKLHKQLVEKSNALSVMEGKFIQLQEKQKTLR
ISHDALMANGDELNLQLKEQRLKCCSLEKQLRSMTFSERRIEELQDRISDLEKERELLKE
NYDKLYNSAFSAAHEEQWKLKEQQLKIQIAQLETALKSDLTDKTEILDRLKTERDQNEKI
SQENRQLQLQYLEQKQQLDELKNHMKFYDQERDINADELSEALLLIKAQKSQKNGDLSFL
EKVDSKINKDLERSMKELQATHAETVQELEKTRNMLIMQHKINKDYQMEVEAVTQKMENL
QQDYELKVEQYVHLLDIRAARIQKLEAQLKDIAYGTKQYKFKPEIMPDDSVDEFDETIHL
ERGENLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPIVRGLHPEYNFTSQ
YLVHVNDLFLQYIQKNTVTLEVHQAYSTDYETIAACQLRFHEILEKSGRIFCTASLVGTK
GDISNFGTVEYWFRLRVPMDQAIRLYRERAKALGYITSNFKGPEQIQWLSHQAPKTAQLS
STDSTDGNLNELHITIRCCNHLQSRASHLQPHPYVVYKFFDFADHDTAIIPSSNDPQFDD
HMCFPVPMNMDLDRYLKSESLSFYVFDDSDTQENIYIGKVNVPLISLAHDRCISGIFELT
DHKKHPAGTIHVILKWKFAYLPPSGSITTEGLGNFIHKEESEAVQRLPPTSPVSARIVAP
TPKPRRLTTKDKKVSFMDITPHQHYETSTLPEDRKEILPEVEHIPGREIDMPTVSHIPEI
PQESSVDKVKENTEKTQEGKDNDVSLLSEGQLAERSLISSEDETEITEELEPEDEEDRSA
SDSDECIIPGSISKNIKQQPPEKIRIEIIALSLNDSRVTADDTIQRLFVECRFYSLPAEE
TPVSLPKPKSGQWVYYNYSNVIYVDKENNQAKRDILKAILLKQEMPNRSVRFTVVSDPPE
DEQDLECEDIGIASVDLADVFREGRDIIEQNIDVLDARASGGSIGKLRVTVEALHALRSV
YEQFRDDLEA
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtccagctgatgagactgcaggagacctgcctgtgaaagatataggtctaaat
ctctttggcatgggagggttgcaagaaacttcaacaacccggacaatgaagtctcgccag
gcagtgtcacgtatcagtcgtgaggaactggaagacagatttttgcgtttgcatgatgag
aacattgtacttaaacagcatgcccgcaagcaagaggataaaattaaaagaatggccacc
aagttaatacggctagttaatgacaagaaaagatatgaacaggttggtggcggccccaag
cggttgggaagagatgtggaaatggaagaaatgattgagcggctacaagagaaagttcat
gagcttgaaagacaaaatgaagtcctcaaaagcagactgatttcaaccaagcagcaactt
cagatccagggtcacaggcacactccgtacagttacgtgcaatctcgtgttaacaccggg
cgtagaagagtgaatgaaaatgcaggcttacaggagtgccccaggagaggtattaaattc
caagatacagatggagcagaaactgtgcaacccatgcctacaaaatatagcaacagttta
ctcaaagaagccagaggagaaataagaaatttagaaaatgttattgagtcacagagaggc
cagatagaagagttagagcacttggcagagatcctgaaaactcagttgaggagaaaagaa
aatgaaattgagttatctcttcttcagcttcgagaacagcaggctacagatcaaaggtca
aacattcgggacaacgtagaaatgattaagcttcataagcaactagtggagaagagcaat
gccctttcagtaatggaaggaaaatttattcagcttcaagagaagcaaaaaactctccgg
atcagccatgatgccttaatggcaaatggagatgagctaaatctgcaacttaaagaacaa
cgtttaaaatgctgcagtcttgagaaacagttacgttccatgacgttttctgaaagaaga
atagaagagctgcaggatagaattagtgatttagaaaaggagcgggaacttctaaaggaa
aactatgataaactttataacagtgccttcagtgccgcccatgaagagcaatggaagtta
aaggaacagcagctgaaaatacagattgctcaacttgagacagccttaaaatccgattta
acagacaaaactgaaatccttgacagattaaaaactgaaagagaccaaaatgagaaaatc
agtcaagaaaatagacaactccagttacagtacctggaacaaaagcaacaacttgatgaa
cttaaaaaccacatgaagttttacgaccaggagagggatattaatgctgatgaattgagt
gaagctctcctgcttataaaggctcaaaaatcacaaaaaaatggagacctttcattttta
gaaaaagtagacagtaaaattaataaagatctagaacggtccatgaaagagctgcaagca
actcatgcagaaacagtgcaagaacttgaaaagacaagaaacatgttaattatgcaacat
aaaattaataaagattatcagatggaagttgaggcagtgacccagaagatggaaaatctg
cagcaagattatgaacttaaagtggaacagtatgttcatcttcttgatatccgggctgca
cgcatccagaaactagaagcccaattaaaggatattgcctatggcaccaagcagtacaaa
tttaagccagaaatcatgccggatgactcagttgatgaatttgatgaaaccattcactta
gaacgaggggaaaatctatttgaaatccatatcaacaaagtaaccttttcttccgaagtt
ttacaggcatctggggataaagagcctgtcaccttctgtacctacgctttctatgatttt
gaactacagacaactcccatagtacggggccttcacccagaatataactttacttctcaa
tacctcgttcatgttaatgacttattcttacaatacattcagaaaaatactgtcactctt
gaggtccatcaagcttacagcacagattatgaaacaatcgcagcttgtcagttgagattc
catgaaattctagaaaaaagtggtcgaatattttgcacagcaagtttggttggaactaaa
ggagacatctccaattttggcacagtggaatactggttccgattaagagttcccatggat
caagcgattcggctttatcgagaacgggcaaaggctttgggatacataacatcaaatttt
aaggggccagagcaaatacaatggttaagtcatcaagcacccaaaactgctcagctcagt
tctactgattccacagatggcaacttaaatgaacttcatattacaataagatgttgcaac
cacctgcagtcccgagcaagccatcttcagccacacccatatgttgtgtacaagtttttt
gattttgcagaccatgacacagccatcattcccagtagcaatgatccacagtttgatgat
cacatgtgtttcccagtgccaatgaatatggatttggatcgataccttaagtcagagtct
ctgagtttttatgtatttgatgatagtgatacccaggagaatatttacataggaaaagtc
aatgtgcctctgatttcattggcacatgacagatgtatttcaggcatatttgagttaaca
gatcataaaaagcaccctgccggaaccattcatgttatattgaaatggaaatttgcttac
cttccaccaagtggctctataacaactgaaggcttaggaaatttcatacacaaagaagag
tcagaagctgttcagagactacctccaacatcccctgttagtgcacgaattgtagcacca
acacctaaaccaagacgtttaacaactaaagataagaaggtatcttttatggatatcaca
ccacatcagcattatgagacctctactcttcctgaagataggaaggaaattttgccagaa
gtggaacatataccaggaagagaaattgatatgccaactgtttcacatattcctgagatt
cctcaggaaagcagtgtagataaggtaaaagagaatactgagaaaacgcaggaaggaaag
gacaacgatgtgtctttactgtctgagggtcagcttgcagaacgaagtttgatttcttcc
gaagatgaaacagaaataactgaagaactggaaccagaagatgaagaagacagatcagct
tctgacagtgatgagtgtattattccaggttctatctccaagaatatcaaacagcagcca
ccagaaaaaatccggattgagatcatagcccttagccttaatgattcccgagtaactgca
gatgacactatccagcgactctttgtggaatgcagattctacagtcttcctgctgaagag
acacccgtgtcacttcccaaacccaagagcggccagtgggtctactataattatagcaat
gtgatctacgtggataaagagaacaaccaggccaagagagacatcttgaaagctatacta
ctgaaacaagagatgcctaatagaagtgttcgcttcactgtggtcagtgaccctcctgag
gacgagcaggacctggagtgtgaggacattggcatcgccagcgttgacctcgctgacgtg
tttcgggaagggagagacatcatcgagcaaaatatcgatgttttggatgccagagcaagt
ggtggaagtatcggcaagctcagggtaacagtcgaagccctccatgccctacggtctgtc
tacgagcaattcagagatgacttggaggcttga
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integrated database retrieval system