Capra hircus (goat): 102182964
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Entry
102182964 CDS
T02910
Symbol
ATG4D
Name
(RefSeq) cysteine protease ATG4D isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
chx
Capra hircus (goat)
Pathway
chx04136
Autophagy - other
chx04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102182964 (ATG4D)
04136 Autophagy - other
102182964 (ATG4D)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
chx01002
]
102182964 (ATG4D)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
chx04131
]
102182964 (ATG4D)
03029 Mitochondrial biogenesis [BR:
chx03029
]
102182964 (ATG4D)
Peptidases and inhibitors [BR:
chx01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
102182964 (ATG4D)
Membrane trafficking [BR:
chx04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
102182964 (ATG4D)
Mitochondrial biogenesis [BR:
chx03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
102182964 (ATG4D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
102182964
NCBI-ProteinID:
XP_017906545
UniProt:
A0A452F1U2
LinkDB
All DBs
Position
7:94907478..94940587
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AA seq
472 aa
AA seq
DB search
MNSVSPAAAQYRSGSPEDARRPEGRRPRGPRTPDPNGLGPSGASGPALASPGTGPGEPDE
VDKFKAKFLTAWNNVKYGWAVKSRTSFSKISSVHLCGRRYRFEGEGDIQRFQRDFVSRLW
LTYRRDFPPLAGGTLTSDCGWGCMLRSGQMMLAQGLLLHLLPRDWTWSQGAGLGPAEPPG
LGSPSRCRGPARRLPPRWAQAPELEQERRHRQIVSWFADHPRAPFGLHRLVELGQGSGKK
AGDWYGPSLVAHILRKAVENCSEVTRLVVYVSQDCTVYKADVARLVARSDPTAEWKSVVI
LVPVRLGGETLNPVYVPCVKELLRSELCLGIMGGKPRHSLYFIGYQDDFLLYLDPHYCQP
TVDVSQADFPLESFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFETLCSELTRVLSSSSAT
ERYPMFTLVEGHAQDHSLDDLCSPPSQQTLRLPRSGRLLKAKRPSSEDFVFL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaactccgtgtcgccggccgccgctcagtaccggagcgggagtccggaggacgcgcgc
cgcccggagggccgcaggccgcggggaccccgaaccccggaccccaacggcctggggccc
tccggagctagcggccccgctcttgcatcgcccgggaccggccccggagagccggacgaa
gtggacaagtttaaggcgaagttcctgaccgcttggaacaacgtcaagtacggctgggca
gtcaaaagccggaccagctttagcaagatctccagtgtccatctctgtggccgccgctac
cgctttgagggcgagggtgacatccagcgtttccagcgggactttgtatcccgtctatgg
ctcacataccgccgggacttcccacccctcgcaggaggcaccctgacctcagactgtggc
tgggggtgcatgttacgaagtggccagatgatgctggctcagggccttctgcttcatctc
ctgcccagagactggacgtggtcccagggcgcaggcctgggcccagccgagccgccgggg
ttgggctctcccagccggtgccgggggcccgcccggcggctgcctccacgctgggcccag
gcccctgagctggagcaggagcgccggcaccggcagattgtgtcctggttcgctgatcac
ccccgggcccccttcggcctacaccggctggtggagctggggcagggctcgggcaagaag
gcaggcgactggtatgggccgtcactggtggcacacatactcaggaaagcggtggagaac
tgctcagaggtcacccgcctggtggtgtacgtctctcaggactgcacagtatacaaggcg
gacgtggcacgcctggtggctcggtcagaccccacggccgaatggaagtccgtggtcatc
ctggtaccagtgcggcttggtggagaaactctcaaccccgtgtatgtgccctgcgtgaag
gagctccttcgttcagagctgtgcctgggcattatggggggcaagccccgccactcgctg
tacttcatcggctaccaggatgacttcctgctctacctggacccacactactgccagccc
accgtggatgtcagccaggccgacttccccctggagtccttccactgcacctcaccccgc
aagatggcctttgccaagatggacccgagctgtaccgtgggcttctatgctggagacaga
aaggagtttgagacgctctgctcagagctgaccagggtcctcagctcctcctcagccaca
gaacgataccccatgttcaccctggtcgagggccacgctcaggaccacagcctggatgac
ctctgctccccgccctcccagcagacactacggctccctcgcagtggccggctcctcaag
gctaaacgcccaagctctgaggactttgtgtttttataa
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