Capra hircus (goat): 102183543
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Entry
102183543 CDS
T02910
Symbol
RAI1
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
chx
Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
chx03000
]
102183543 (RAI1)
Transcription factors [BR:
chx03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
102183543 (RAI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
102183543
NCBI-ProteinID:
XP_017920275
UniProt:
A0A452FEF9
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All DBs
Position
19:complement(34296405..34400733)
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AA seq
1885 aa
AA seq
DB search
MQSFRERCGFHGKQQTYQQTSQETSRLENYRQPSQAGLSCDRQRLLTKDYYGPQPFPGYE
GGAGTPATARAGKGLSSPQAPPGRPAFAGYTVQDGSPYPGRYSGEEGLQAWGGPQPPPPQ
PQPLPGGVGKYDENLMKKTVVPPSRQYPEQGAQLPFRTHALHVQQQLPQPPPSLAYPKLQ
RQKPQSDLASPLPFSQGGHFPQQSQSFPASSTYSSSGQAGGQGAHSYKSCTAPSTQPHDR
PLTANASLAPGQRVPNLHAYQSSRLSYDPQKQQQQQQTLQSRHHAQESLHYQNLAKYQHY
GQQGPGYCQPDATVRTPEQYYQTFSPGSGHSPARSVGRSPSYSSTPSPLMPNLENFPYNQ
QPLGPGAFPAGLTDHSHFMPLLNPSPTDAASSVDTQAANCKALQKDKLPESLLSDLSLHS
LTALTSQVENISNTVQQLLLSKAAGPQKKGLKSLVARTPEQHKSQHCSPEGSGYSAEPAG
TPLSEPLSSTPQSTHAEPPEADYLSGSEDPLERSFLYCSQARGSPARVHGGSKAKPESVS
TCSVTSPDDMSTKSDDSFQSLHGSLPLDSFSKLVAGERDCPRLLLSALAQEDLASEILGL
QEAISEKADKAWAEAPGLAKDTGKPPFSLENHSACLDPVAKGAWPRPGEQESLPEALQLD
KGSSAKDFSPGLFEDPSVGFTTPDPKKTAGPLSFSAKATLGAAASDPTVAFDCFPDTTSA
GSGDGAHPFAWPEENLGDACPRWGLHPGELTKGLEQGGKATDSASQDGTREASACLGFQE
EAPPGEKAAVPRDSQQEAAGGVKEEAGGLLQCPEVSKADRWLDDSRHCCSAADFGDLPLL
PAPGRKEDLEAEEYSSLCELLGSPEQRPGLQDALSPKAPLLCGKEEVEEVLDPKAGWGSP
CPLSGDSVILLGPTVGAESKVQSWFESSLSHMKPEEEGPEGVLAPGDSAAVTPDASLAPK
PNKPAVPEAPIPKKEPVPRGKSLRSRRVHRGLPEAEDSPCRAPALPKDLLLPESCTGPPQ
GQMEGAGTPGRGISEGLPRMCTRSFTALSEPRTPGPPGLPTTPAPPDKLGGKQRAAFKSG
KRVGKPSPKAASSPSNPAALPVASDSSPMGSKTKETDSLDAPGKDQRSMILRSRSRAQEA
FHSKRRRPSESRLPNCRAAKKLLANNHLPATFKVAGSPQKEGRAGQRARVPKPGASGKLS
DRPLHALKRKSAFMAPVPTKKRNLVLRSGGLGGDVKEEGAEGSPTLFKRITSPKKAKPTK
GNGEPTAKPPPLETPDTGLKLASRASFQGAMKTKVLPPRKGRGLKLEAIVQKITSPSLKK
FACRAPGAPPGNPVSPSLPEKERGLKSAGGSLLGAEEGLLNVSPGQKFPAALGAEPLCRN
PTNRSLKGKLVNSKKLSLTDSFKTEAFTSPEALLPGGTALAPKKRSRKGRAGALGLPKGS
LEKRPHLGPALLLTPRDRASGTQGASEDSSGIGGKKPKTEELGLAAQPPEGRPCQPQTRA
QKQPGHANYSSYSKRKRLTRGRAKSTTSSPCKGRAKRRRQQQVLPLDPAEPEIRLKYISS
CKRLRADSRSPAFSPFVRVEKRGAFTTVCTVVNSPGEEPQPQRKPSSSSSCSFLDAAGAS
LATLPGGIVPQPRPSLPLSSTMHLGPVVSKALSTSCLVCCLCQNPANFKDLGDLCGPYYP
EHCLPKKKPKLKEKVRLEGTCEEASLPLERTLKGLECPAAASSAATTTTGKPPRPDGPAD
PAKQGSLRTSARGLSRRLQSCYCCDGRGDGSEEAAPADKSRKHECSKEPPAEPGGDTQEH
WVHEACAVWTGGVYLVAGKLFGLQEAMKVALDMTCSSCQEAGATIGCCHKGCLHTYHYPC
ASDAGCIFIEENFSLKCPKHKRLPL
NT seq
5658 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcttttcgagaaaggtgtggtttccatggcaaacagcagacctaccagcagacc
tcacaggagacgtcgcgcctggagaactacaggcagccaagccaggccgggctgagctgc
gaccggcagcgtctgctgaccaaggactactacggcccgcagcccttccccggttacgag
ggcggcgcgggcacgcccgccaccgcgcgcgccggcaaaggcctgtcctcgccgcaggcc
ccgccggggaggccggccttcgcgggctacaccgtccaggacggcagcccatacccaggc
cgctactcgggcgaggagggcctgcaggcctgggggggcccccagccacccccgcctcag
ccgcagcccctgccaggtggggtgggcaaatatgacgagaatctgatgaaaaagacggtg
gtgccccccagccggcagtatccagagcagggtgcccagctgcccttccggactcacgcc
ctccacgtccagcagcagctgccgcagcccccaccatccctggcataccccaagctccag
aggcagaaaccccagagtgaccttgcctcccccctgcccttctcccagggcggccacttc
ccccagcagtcccagtccttccctgcctcctctacctactcctccagtggccaggccggc
gggcagggggcccactcctacaagagctgcacagccccctccacccagccccacgacagg
ccgctgaccgccaatgccagcctggcccctggccagcgggtcccgaaccttcacgcctac
cagtccagccgcctcagctatgacccacagaagcagcagcagcagcagcagaccctccag
agccgtcaccatgcccaggaaagcctgcactaccaaaaccttgcaaagtaccaacactat
gggcagcaaggcccaggctactgtcagccggatgcgactgtcaggaccccagagcagtac
taccagaccttcagccctggctctggccactcacccgcccgctctgtgggccgctcaccc
tcctacagctccaccccgtcaccactgatgcccaacctggagaactttccctacaaccag
cagccactcggccctggggccttccccgccggcctcaccgaccacagccacttcatgccc
ctgctcaacccttccccgacggatgctgccagctctgtggacacccaggccgccaattgc
aaggccctgcagaaggacaagcttcccgagagcctgctgtcggacctcagcctgcatagc
ctcacggccctgacctcccaggtggagaacatctccaacaccgtgcagcagctgctgctg
tccaaggcggccgggcctcagaagaagggcctcaagagcctggtggcccggacaccggag
cagcacaaaagccagcactgcagccccgagggcagcggctactcggccgagccagcaggc
acaccgctatcagagccgctgagcagcacaccgcagtccacgcatgctgagccgcccgag
gccgactacctgagcggctctgaggacccactggagcgcagcttcctctactgcagccag
gcccgcggcagccccgccagggtccacggcggctccaaggccaagcccgagtccgtgtcc
acctgctccgtgacctcaccggatgacatgtccaccaagtctgacgactccttccagagc
ctgcacggcagcctgcccctcgacagcttctccaagcttgtggctggcgagcgagactgc
ccgcggctgctgctcagcgccctggcacaggaagacttggcctccgagatcctggggctg
caggaggccatcagcgagaaggccgacaaggcctgggccgaggcgccgggcctggccaaa
gacaccggcaagccgcccttctctctggagaaccacagcgcctgcctggaccctgtggcc
aagggtgcatggccacggccaggggagcaggagtccctgcccgaggccctgcagctggac
aagggcagcagcgccaaggacttcagtccggggctatttgaagacccctctgtgggtttc
accacccctgaccccaagaagacagccggtcccctctccttcagcgccaaggccaccctg
ggggctgcggcctcagaccccactgtggcttttgactgcttcccagacacgacctctgcc
ggctcgggggatggtgcccacccctttgcctggcccgaggagaacctgggggatgcctgt
cctcggtgggggctgcaccccggcgagctcaccaagggtctggagcagggcggaaaggcc
actgacagtgccagccaggacggcacccgggaggcttcggcctgcctgggcttccaggag
gaggcaccccctggggagaaggctgcagtgccccgggactcccagcaggaggcggcgggc
ggggtgaaggaggaggcaggcgggctgctgcagtgccccgaggtgagcaaggccgaccgc
tggctggacgacagtcggcactgctgctcggccgccgactttggggacctcccactgctg
ccagcgccgggccggaaggaggacctggaggccgaggagtactcatccctgtgcgagctc
ctggggagccctgagcagaggccgggccttcaggatgcactgtcacccaaggccccgctg
ctgtgcggcaaggaggaggtggaggaggtgctggaccccaaggccggctggggctccccg
tgtcccctctctggggactcagtcatcttgctgggccccaccgtgggtgccgagtccaag
gtccagagctggtttgagtcctccctgtcccatatgaaaccagaggaagaggggcccgag
ggggtgctggctccaggggattccgctgctgtgaccccggacgcctccttggcaccaaag
ccaaacaagcctgctgtgcccgaggcccccattcccaagaaagagcccgtgcctcgcggc
aaaagcttgaggagccggcgggtgcaccgggggctgcctgaggccgaggactccccgtgc
agggcaccggcactgcccaaagacctgctgctccccgaatcatgcacagggcccccccag
ggacagatggagggggcggggaccccaggccgggggatctcagaaggacttcccaggatg
tgcacccgctccttcacagccttgagcgagccccgcacacccggacccccaggcctaccc
accacccctgcccccccagacaagctggggggcaagcagcgagccgccttcaagtcaggc
aagcgggtggggaagccctccccaaaggcagcgtccagccccagcaacccggccgccttg
cccgtggcctccgacagcagccccatgggctccaagaccaaggaaacggactcgctggac
gcaccaggcaaagaccagcggtccatgatcctccggtcccgcagcagggcccaggaagcc
ttccactccaagcgcaggcggccctcagagagccgactgccaaactgccgtgctgccaag
aagctcctcgccaacaaccacctgcccgccacgttcaaagttgctggcagcccccagaag
gaggggagggcaggccagcgggcgagggtccccaagcctggtgccagcggcaagctctca
gatcgacccctccacgccctcaaaaggaagtcagccttcatggctcctgtccccactaag
aagcgcaacctggtcttacgcagtggcggcctcgggggagacgtgaaggaggagggggcc
gagggctccccaaccctcttcaagaggataacatctcccaagaaggcgaaacccaccaag
ggcaatggtgagcccacggcgaagccaccgcccctggagaccccagacactggcctgaag
ctggcctcacgggcgtccttccagggggccatgaagaccaaggtgctgccaccccgaaaa
ggccgaggcttgaagctagaggccattgtgcagaagatcacctcgcccagcctgaagaag
ttcgcgtgcagagcaccaggggcccctcctgggaatcctgtgagcccatccctccccgag
aaggaacgtgggctcaagagtgctgggggcagccttctgggggcagaggaaggtctctta
aatgtgagccctgggcagaagttcccagcagctctgggggctgagccattgtgcagaaat
ccgaccaatagatccttaaaaggcaaactcgtgaacagtaagaaactgtccttgactgat
agtttcaaaacggaggccttcacatccccagaggccctgctgcccgggggcactgccctg
gcacctaagaagagaagccggaaaggcagagctggggcccttggactccccaaaggctcc
ttggagaaaaggccccacctcggcccagctctgctgctaactccccgagacagggccagt
ggcacgcagggggccagtgaggacagctctggcataggaggcaagaagccaaagacggag
gagctgggcctggctgcccagcccccagagggccggccctgccagccccagacgagggca
cagaagcagccgggccatgccaactacagcagctattccaagcggaagcgcctcacgcgg
ggccgggccaagagcaccacctcctcgccctgtaaggggcgtgctaagcggcggcggcag
cagcaggtgctgcccctggatcccgccgagcctgaaatccgcctcaagtacatttcctcc
tgcaagcggctgcgggcagacagccgcagccccgccttctcgcccttcgtgcgggtggag
aagcggggtgcgttcaccaccgtgtgcactgttgtcaactccccgggagaggagccccag
ccccagaggaagccttcctcctcctcgtcctgctccttcttggacgcggctggggcctcc
ctagccacgctccctggaggcattgtcccacagcctcggccctccctgcccctctcctcc
accatgcacctggggcccgtggtttccaaggccctgagtacctcttgccttgtttgctgc
ctctgccaaaacccggccaacttcaaggacctcggggacctctgtgggccctactaccct
gaacactgcctccccaaaaagaagccaaaactcaaggagaaggtgcggctggagggtacc
tgtgaggaggcctcgctgcctctcgagaggacactcaaaggcctcgagtgcccagctgcc
gcgtcatctgctgccaccaccaccactgggaagccccccaggcctgatggcccagctgat
ccggccaagcagggctctctgcgcaccagtgcccggggcctgtcccggcggctgcagagt
tgctactgctgtgacggtcggggggatggcagtgaggaggcagccccagccgacaagagc
cgcaagcatgagtgcagcaaggagccgccggctgagcctggtggggacacccaggagcac
tgggtgcatgaggcctgtgccgtgtggacgggcggggtctacctggtggccgggaagctc
tttgggctgcaggaggccatgaaggtggccctggacatgacttgttccagctgccaagaa
gcgggggccaccatagggtgctgccacaaaggatgcctccacacctaccattacccgtgt
gccagcgacgcgggttgtatattcattgaagagaacttttctttgaaatgccccaaacat
aagaggctgccgttgtaa
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