Capra hircus (goat): 102183645
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Entry
102183645 CDS
T02910
Symbol
RIF1
Name
(RefSeq) telomere-associated protein RIF1 isoform X1
KO
K11138
telomere-associated protein RIF1
Organism
chx
Capra hircus (goat)
Pathway
chx04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
102183645 (RIF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chx03032
]
102183645 (RIF1)
DNA replication proteins [BR:
chx03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
102183645 (RIF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rif1_N
Motif
Other DBs
NCBI-GeneID:
102183645
NCBI-ProteinID:
XP_005676208
LinkDB
All DBs
Position
2
Genome browser
AA seq
2465 aa
AA seq
DB search
MTAADQSPLAPLLETLEDPSASLGEQTDAYLTLTSRMTGEDGKEIITEIEKKLPQLFKVL
KAHIASQNSELSSAALQALGFCLYNPKIASGLSEINIQELLSKLNDIVKSSDKNVRTRAL
WVISKQTFPTEVVGKVVSSIIDSLEIVFNRGEMHSAVVDYEALNVIIRLIEQAPVQMGEE
SIRWAKLVIPLLVHSAQKVHLRGATALEMGMPLLLQKQQEIASITEQLMTTKLLSELQKL
FMSKNETYVLKLWPLFVKLLGKTLHRSGSFINSLLQLEELGFRSGAPMIKKIAFIAWKSL
IDNFALNPEILCSAKRLKLLMQPLSSIHVRTETLALTKLEVWWYLLMRLGPHLPANFEQV
CVPLIQSTISIDSNASPQGSSSRVATPGLNPVTPVHKGASPYGSPITPRMNLNSNFGMAT
IPSIQLLGLEMLLHFLLGPEVVSFAKQNKLILSLEPLEHPLISSSSFFSKHSNTLITAVH
DSFVAVGKDASDVVINAIWKELISLVKSVIESGNKKERPGSEVLTLLLKSLESIVNSEVF
PVLKTLVLMEITIKGLPQKVLGSPAYQVANMDILNGTPALFLIQLIFNNNLLECGVEDER
FFLNLETLVGCVLSGPTSPLAFSDSVLNVINQNAKQLDNKEHLWRMWNIIVTPLTELINQ
TNEVNQGDALEHNFSAIYGALILPINHIFPAQKIPTVTMKTLLKTWSELYRAFARCAALV
ATAEENLCCEELSSKIMSSLEDEGLSNLLFLDRITHIITVMVDCIDFSPYNIKYQPKTKS
PQRPTDWSKKKKEPLGKLASLIKLIVRVICSFHTLSLKEVHSDTLLTIGNSITSILSSVL
GRISLPSMIRNIFATLTRPLALFYENTKFDEVPKVYSCMNNKLEKLLGEIIACLHVSYTG
TYDSELLEQISPLLCIIFSHKNKQIRKQSAQFWNATFAKVTMLIYPEELKPILKQAKQKS
LLLLPGLENVEIMEESSGPYSDTTENSQLNMKISGMERKSSGKRDSFLAQTKDTKDSMKP
PAKLKLESSTPKAKCEMPLEEEKSTDFVFIPPEVKETKERILTEHQKEVLKTKRCDIPAM
YNNLDVSQDTLFSQYSQEESMEISTLTEKSKEDSKMIFKEEQKENDIVIPQHVMENCGMD
EHLEKASLLNNECGSIEETSPEIPSSNNDARKKALIASNKPTECASTTENPFGVPSSSVS
NATISGAPLQPTSRRQSFITLEKFDGSENRPFSPSPLNNMSSTVIVKNNQEGMAKTDNPS
KAKQREVALSKPDSEKTHGTKRSSRRSSKPEPIGSKKSKPLMRSEQEKSTQESVDGTIAL
ENNPPGLLNQTECVLDNQVHLSESAVECEDTMLKSTMENTVLLENNTVEERTLEINLESK
ENTPPAIITDQTVSEDSHIQVTPNQKTLRRSLRRRSEIAEPTTDSQDKENNHQKRERRKE
EEKTPQKSPLHVKDDVLPKQKLISEQSVQENLVDKGNNLHEKAFGETSANAETDENRRKP
YLENTKSEGDGVQDIVDKSSEKPVRGRTRYQTRRASQGLLSSIENSESDSSEAKEEGSKK
KRSGKWKNKNSDSVDIEDQEEKMVQQECIKVENQAHDYKGNPEVDKDIKSQICEKREESN
TVTLQDSAVSPDLLQVYDDVLNTSEGKSKSNKDAEHSFSNPSVPESNLRTRNANKRLHKR
DSIENSMGESSKIGTSDISLLSEKTLQTVECQHKRSRRVRRSKGCDCCGEKSQAQEKSFT
ELKDTENYDVKVNETEKTDVETPVSISETSKADLYSEVKLLDEHHSVNFHLDLKEENDTT
TDSLIISETELKENTTQSFLPSEMIKFKETSHRDSEEAISVESQEPCNKKCKTVDPNLDV
SKDISLECFSLETKEGKSEATPKEKLSTENIVIVESNAESNPEVVDAMELNIENDQSEAG
FSEQESVKTGNAEKEVTEENSERMDTPESVKVDEAVTEEFNSAADYSDNPTPVKGNAQVE
ISEQMTVGELGRGSDESDPGSSEEMNSEMKNCEKTVVGEVTTESDHVTETEEEDLTTTAS
LPVEAETKGLDTEVNSFVPDTIEMITEEGKVDPNKTETNIEPNKLEETQLDDNQMVVESN
ETLPEVHHTSEKVEEIPQPLTSETGVSGLISEDSNTSPQKLKDIDPLLMSANESPSGMHT
RCVWSPLASPSTSILKRGLKRPQEDEISSPVHKVRRVSFADPIYQAGLADDIDRRCSIVR
CHSSNSSLMVKSVRTSPTVQSKHNTTSAKGFLSPGSRSSKFKSSKKCLIAEMAKESVPCP
TESVYPALVNCVAPVEIILPQITSNMWARGLGQLIRAKNIKTIGDLSTLTASEIKTLPIR
SPKVSNVKKALRMYHEQQVKSRGLEEIPVFDISEKTINGMENKSISPDEERLASDLIDPV
ALEAPLSKNLVAQISALALQLDSEDLYNYSGSQLFEMHEKLGSMANSIIKNLQSRWRSPA
HENSF
NT seq
7398 nt
NT seq
+upstream
nt +downstream
nt
atgacggccgcggatcagagccccctggcaccgctgttggagactttggaagacccttcc
gcctcccttggagagcagaccgacgcttacctgaccctgaccagtcgtatgactggagaa
gatggaaaagaaatcattacagaaattgagaaaaaacttcctcagctatttaaagtttta
aaggctcacattgccagtcaaaactcagagctcagtagtgctgctctacaggccttgggg
ttttgcttatataatcccaaaattgcctctggattatcagagataaatattcaagaactg
ctttcaaaactgaatgatattgttaaaagttcagataaaaatgttcgtactagggcactt
tgggtgatatccaagcagacgtttcccactgaagttgttggcaaagtagtatctagtata
attgactcattagaaatagtatttaatagaggagagatgcattctgctgttgtggattat
gaagcattaaatgtcattataagactaattgagcaagccccagttcaaatgggagaagag
tcaattaggtgggcaaaattggtcatacctttactggttcattcagcccaaaaagtacat
ttgcggggagccactgctctagagatgggaatgcctttgttgcttcagaaacaacaagaa
atagcatctatcacagagcagcttatgactaccaaattactttcagaactccagaaactg
tttatgagtaaaaatgagacttacgtgttaaaattatggcctttatttgtcaaacttctt
gggaagaccttgcatcgaagtgggagtttcattaattctctattacagctggaagaactg
ggatttcgtagtggagcacccatgattaaaaaaatagcttttattgcttggaagagttta
atagataattttgctttaaatccagaaatactatgtagtgcaaaaagactgaagttgttg
atgcagcctttgagttctatccacgtgagaacagaaactctagcgctgacaaaactagaa
gtctggtggtatttgttgatgagactaggacctcatcttcctgctaattttgaacaggtt
tgtgtacctctgattcaaagcacaataagcattgattctaatgcttcacctcaagggagt
tcatctcgtgtagctactccaggtttaaaccctgtgaccccagtacacaaaggtgcttct
ccatatggatctcccataacccctcggatgaacttgaattcaaattttggaatggcaaca
atcccctctatacaacttttggggcttgaaatgttacttcattttttgttgggtccagaa
gttgtgagttttgctaagcaaaacaaacttatactgagcctagagccgcttgaacatcca
ttaatcagcagctcttcttttttctccaaacactcaaatacacttatcactgctgttcat
gatagctttgttgcagttggaaaagatgcttctgatgtagttattaatgctatttggaag
gagttaattagcttggtgaagtcagttattgaatcaggtaacaaaaaagagagaccaggt
tctgaagttttgactcttttattaaaatctttggaaagcatagtgaattcagaagtattt
cctgtattgaaaacactggttctcatggaaattacaattaaaggacttcctcagaaagta
ttaggttctccagcatatcaggttgctaatatggatattcttaatggaacccctgctttg
ttcttaattcagttaattttcaataacaatctattggagtgtggtgtggaagacgaaagg
ttttttctcaacctggaaacacttgtgggctgtgttctttctggtccaacttcaccacta
gctttcagtgactctgtcttaaatgttattaatcaaaatgcaaagcagttggacaacaag
gagcatctttggagaatgtggaatattatagtcaccccattaacagaattgattaatcag
accaatgaagtgaatcaaggtgatgccttagaacataatttcagtgctatctatggtgcg
ctgattttgccaataaaccatatttttccagcacaaaaaattccaacggtcactatgaag
accttacttaaaacttggtcagaattatatagagcatttgctcgctgtgcagctttggtg
gcaactgcggaagagaatttatgctgtgaggaactgtcttccaagataatgtccagtttg
gaagatgaaggcctttcaaatttattgttcttggataggatcactcatattattactgta
atggttgattgcatcgacttttcaccatataatattaaatatcaacccaaaactaaatca
ccgcagagacctacagactggtccaaaaagaagaaggaacctttagggaagttggcttct
ttaattaaacttattgtgagagtgatctgttcttttcacacattgagcctcaaggaagta
cattctgatactctcctcactattggcaactcaatcaccagcattctttccagtgttctt
ggacgtatttctctgccttctatgatccggaatatatttgcaactttaacaagacctctg
gcattattttatgaaaacacaaagtttgatgaagttcctaaagtgtatagttgtatgaac
aacaagttagaaaagttactaggagaaattattgcttgtctacatgtcagctacactgga
acttatgacagtgaacttcttgaacagatctcgccattattatgcataatattttcacac
aagaacaaacagataagaaaacaaagtgctcagttctggaatgccacatttgctaaagtg
acgatgttgatttatcctgaggagttaaagccaatactaaaacaagccaaacaaaaatct
ctacttttattgcctggtttggaaaatgttgaaattatggaggaatccagtggaccgtat
tcagatacaacagaaaattcacaattaaatatgaagataagtggcatggaaagaaaatca
agtggaaaaagagattcttttttggcacaaacaaaggatacaaaagacagtatgaaacca
ccagctaaattgaaactagagtcttcaactccaaaagcaaagtgtgaaatgcctttggaa
gaagaaaagtctactgactttgtgtttatacctccagaagtaaaagaaacaaaggaaaga
atactaactgaacaccagaaagaagtactcaaaacaaagaggtgtgatattcctgccatg
tataataatctggatgtttcacaagatactttattttctcagtatagtcaggaagaatct
atggaaatttctactttaactgaaaaatcaaaagaagactccaagatgatatttaaggag
gaacaaaaggagaatgacattgtcattcctcaacatgtcatggaaaactgtggtatggat
gaacatcttgaaaaggcttcccttttgaataatgagtgtggttctattgaggaaaccagt
ccagaaataccaagcagtaataatgatgccaggaaaaaagctttaattgcttcaaataaa
ccaactgaatgtgcatctactacagaaaatccatttggtgtccccagtagctcggtttct
aatgccaccatttctggagctcccttgcagcctacaagtcgaaggcaatcctttattact
ttggaaaagtttgatggttcagaaaatagaccttttagtccgtcacccttgaataatatg
tcatcaactgtaatagtgaaaaataaccaggaaggcatggctaaaacagataatccatca
aaagcaaagcaaagagaagtggctctttccaaacctgactctgaaaaaacacatgggact
aagagatcaagccgaaggtcgagtaaacctgaaccaatagggagtaaaaagtctaaaccc
ttaatgagatctgaacaagagaaaagtactcaagaatctgttgatggcacaatagcctta
gaaaataacccacctggcttgcttaatcagacagaatgtgtgttagataatcaggttcat
ctctctgaatctgcagtggagtgtgaggatacaatgcttaaatcaacaatggagaatact
gtattattagaaaacaatactgtagaagagagaaccttagaaatcaacttggaatccaaa
gaaaatacacccccagccataataacggatcagacagtaagtgaggatagtcatattcag
gtaactccaaatcagaaaacccttagacgatctttaaggcgacgttcagaaatagcagaa
ccaaccactgatagccaagataaagaaaataatcatcaaaaaagggaaagacgtaaagaa
gaagaaaagactccacagaagagtccgttacatgtaaaagatgatgttttacctaagcaa
aaattgatttctgaacaaagtgtacaggaaaacttagttgacaaaggaaataatttacat
gagaaagcttttggggagacaagtgctaatgctgaaactgatgaaaatagaaggaagcca
tatcttgagaatactaaatctgaaggagatggtgtgcaggacattgtagataaatcctct
gagaaaccagtaaggggacgaacacgatatcaaacgagaagagcatcccagggtttactt
tccagcattgaaaactcagaatctgatagttctgaggcaaaagaagaaggttctaaaaag
aaaagatctggaaaatggaagaacaaaaacagtgacagtgttgacattgaagatcaagaa
gagaaaatggtacaacaggaatgtataaaagttgaaaatcaggcacatgattataaaggg
aatcctgaagtagacaaagatataaaatctcaaatctgtgaaaaaagagaggaaagtaat
actgtaactcttcaagattctgcagtatctccagatttattgcaagtttatgatgatgta
ttgaatacttctgagggaaaaagtaaaagtaacaaagatgcagaacattccttttcaaat
ccttctgtaccagaatcaaatctaaggactagaaatgccaataagaggttacataagcga
gattctatagaaaatagcatgggggaatcctcaaaaatagggacatcagacatttctttg
ctttctgaaaaaactcttcaaacagtagaatgccagcacaagagaagtaggagggtgagg
cgatctaaaggttgtgattgttgtggagaaaaatcacaggctcaggaaaagtcatttact
gagttaaaggatacagaaaattacgatgtaaaagtcaatgaaacagaaaagacagatgtg
gaaacacctgtatctatttcagaaacttcgaaagctgatctgtactcggaggttaaactt
ttagatgagcatcatagtgtgaattttcatttggatctcaaggaagagaatgatactact
actgattcattaattatatctgaaactgagttgaaagaaaatactactcaaagctttctt
ccttctgaaatgataaaatttaaagaaacttctcatagggattctgaggaagcaatatct
gtagaaagccaggagccatgtaataagaaatgtaaaactgttgacccaaatttagatgtt
tcgaaagatatttcattggaatgtttttctttggagaccaaagaaggaaagtcagaggcc
actccaaaagagaaattgagtacagagaacattgttattgttgaatcaaatgcagaatca
aatccagaagtagtagatgctatggaattgaatatagaaaatgatcagtctgaagccggc
ttctctgaacaagagagtgtcaaaactggtaatgcagagaaagaagtaacagaggaaaac
agtgaaagaatggatacacctgaatcagtgaaagtcgatgaagcagtaactgaggaattt
aattcagctgccgattattctgataacccgacacctgtaaaagggaatgctcaggtagag
atctctgaacaaatgacggtgggggagctaggcagaggaagtgatgaatctgatccaggc
tcatctgaagaaatgaactctgaaatgaaaaattgtgaaaaaacagtggttggtgaggtg
actactgaatctgaccacgtcactgaaacagaagaggaagatttaactaccacagcttct
ctgcctgtagaagctgaaacaaaggggttagatacagaagtcaatagctttgttcctgac
acgattgagatgatcacggaagaaggaaaggttgaccctaacaaaactgaaacgaatatt
gaacctaataaattggaggaaacacagttagatgacaatcagatggtagtggaaagtaat
gaaactttaccggaagttcaccatacttcagagaaagtagaggagataccacaacctctg
acatctgaaacaggtgtttctggactgatctcagaagacagtaatacatctcctcaaaaa
ttaaaggatattgatcctttactcatgtcagcaaacgagagtcctagtggcatgcacaca
cgttgtgtgtggtctcctttggcttctccatccaccagcattttaaagagaggactaaaa
agaccccaagaagatgaaatctcgtcacctgtccacaaggttcgccgtgtctcctttgca
gatcctatataccaagcaggattggcagatgacattgataggcgatgctctattgttagg
tgccattcttcaaatagttctctcatggtaaaaagtgttagaacttcacctactgtgcaa
tctaagcataataccacttcagccaaaggatttctgtccccaggatcacgtagctctaaa
tttaagagctcaaagaagtgtttaattgcagaaatggctaaggaatctgtgccatgccca
acagaaagtgtttacccagctttggtgaactgtgtagcaccagttgaaatcattttacct
cagattacatccaacatgtgggcaagaggactgggacagctcattagagccaagaatata
aaaacaattggcgatttgagtacccttacagcatctgaaataaaaactcttcctatccgt
tctccaaaagtgtctaacgtaaaaaaggctctcagaatgtatcatgagcagcaggtgaag
tctcgtggactagaagagattccagtttttgatatttctgaaaaaacaataaatggaatg
gaaaataaatctatctctcctgatgaagaaagacttgcctcagatttaattgatcctgtt
gctttagaagctccgttatctaaaaatcttgtcgcacagattagtgcacttgctcttcaa
ctagattcagaagatctctataattattcaggaagccagctatttgaaatgcatgagaaa
cttggtagcatggcaaactctataattaaaaatctgcagtcacgttggaggtcaccagcc
catgaaaattctttttag
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