KEGG   Capra hircus (goat): 102184066
Entry
102184066         CDS       T02910                                 
Symbol
TDP1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1 isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
chx  Capra hircus (goat)
Pathway
chx03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:chx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    102184066 (TDP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:chx03400]
    102184066 (TDP1)
DNA repair and recombination proteins [BR:chx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     102184066 (TDP1)
SSDB
Motif
Pfam: Tyr-DNA_phospho RMMBL
Other DBs
NCBI-GeneID: 102184066
NCBI-ProteinID: XP_017909336
LinkDB
Position
10:complement(1507357..1580301)
AA seq 621 aa
MMSQEGNYGKWTISSSDESEEEKPQPDKPSASLLPDTGQGAAGQPKYTCSEARKAAHKRK
LEPVKFSSTDSASEASPCKRQKSGSQEDLGWCLSSSEDELPPERQQEQAKDPRVKEEKGP
PSPRDRAARGAGPHGPPTSRGLPEEEDEQEMSGEGQDIWDLLDKGNPFQFYLTRVSGIKP
KYNTGALHIKDILSPLFGTLVSSAQFNYCFDVDWLVRQYPPEFRKKPVLLVHGDKREAKA
HLLAEAKPYGNVTLCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTSNLIREDWHQKTQGI
WLSPLYPRIVHGTHGSGESATHFKADLISYLAAYNAAPLKEWIDTIQEHDLSETNVYLIA
STPGRFQGNQKDNWGHFRLRKLLKEHASPAPGAESWPVIGQFSSIGSMGADESKWLCSEF
KESLVTLGKESRTLGSAVPLHLIYPSVENVRTSLEGYPAGGSLPYSIQTAEKQNWLHSYF
HKWSADTSGRSNAMPHIKTYLRPSPDFSQIAWFLVTSANLSKAAWGALEKGGTQLMIRSY
ELGVLFLPSAFGLDSFKVKQKFFSGSSQEPTASFPVPYDLPPELYGDRGAPAAWADGWAL
TATPHCHPHRVASVHPGGSDQ
NT seq 1866 nt   +upstreamnt  +downstreamnt
atgatgtcccaggaaggcaattatgggaagtggacaatatccagtagtgatgaaagtgag
gaggagaagccgcagccggacaagccatctgcctctctcctccccgacactgggcagggg
gccgccgggcagccgaagtacacctgctccgaggctcggaaagccgcccacaagaggaag
ctggagcctgtgaaattcagcagcacagactcagcttcagaagcttcgccttgcaaaaga
cagaagagcgggtcccaggaggacctgggctggtgtctgtccagcagtgaggacgagctg
cctccagagcggcagcaggagcaggcgaaggacccacgggtgaaagaggagaaaggcccc
ccttctcccagggaccgcgcggctcggggcgctgggcctcacggcccccccaccagccgt
gggctcccagaggaggaagatgagcaggaaatgtcaggggaaggccaggacatctgggac
ttgctggataaagggaaccccttccagttctacctcacgagagtctccgggattaagccc
aagtataacacgggagccctccacatcaaggatattttatctcctctctttgggacactt
gtttcttcagctcagtttaactactgctttgacgtggactggcttgtaagacagtatcca
ccagagttcaggaagaaaccagtcctgcttgtgcatggcgacaaacgggaagcaaaggct
cacctcctggccgaggcgaagccttacgggaatgtcaccctctgccaggcaaagttggat
attgcatttggaacacatcacacgaaaatgatgcttctgctgtacgaggaaggcctccgg
gttgtcatacacacctccaacctcatccgcgaggactggcaccagaaaacacagggaata
tggttgagccccttgtacccccgaatcgtccacgggacccacggatctggagagtcggcc
acacacttcaaagctgacctcatcagctacctggcagcttataacgccgcccctctcaag
gagtggatagacaccatccaggagcacgacctctcagaaacaaatgtttaccttattgcc
tcaaccccaggacgctttcaaggaaatcagaaagataattggggacatttcaggcttagg
aagcttctgaaggagcacgcctcccccgcacctggagcagaatcttggccggtcataggt
cagttctccagcatcggctccatgggggcagacgaatcaaaatggttgtgttctgagttt
aaggagagcctggtgaccctgggcaaggagagcaggaccctaggaagtgctgttcctctc
catctgatctatccttcagtggaaaatgtacggaccagcttggaaggatatccagctggg
ggctctcttccctatagcatccagacggcagagaaacagaattggcttcattcctatttt
cacaagtggtcagctgacacgtcaggccgcagcaacgccatgccacatatcaagacttac
ctgagaccctctccagacttcagtcagatcgcttggttcctggtcacgagcgccaacctg
tccaaggccgcctggggcgcgctggagaagggcggcacccagctgatgatccgctcctac
gagctcggcgtcctctttctgccctcagcgtttggcctggacagtttcaaagtgaaacag
aaattcttctccgggagcagccaggagcccacagcctccttccctgtgccgtatgacctg
cctccagaactgtacggagacagaggcgcgcctgctgcctgggccgacggctgggctctc
accgctactccgcactgccacccgcatcgggtggcctctgtacacccaggtggcagtgac
cagtga

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