Capra hircus (goat): 102184549
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Entry
102184549 CDS
T02910
Symbol
CTCF
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
chx
Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
chx03000
]
102184549 (CTCF)
03036 Chromosome and associated proteins [BR:
chx03036
]
102184549 (CTCF)
Transcription factors [BR:
chx03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
102184549 (CTCF)
Chromosome and associated proteins [BR:
chx03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102184549 (CTCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_jaz
zf-met
zf-C2HE
zf-C2H2_6
A24_N_bact
Motif
Other DBs
NCBI-GeneID:
102184549
NCBI-ProteinID:
XP_017917648
EnsemblRapid:
ENSCHIG00000013690
UniProt:
A0A452EHY8
LinkDB
All DBs
Position
18:36407875..36450353
Genome browser
AA seq
727 aa
AA seq
DB search
MEGEAVEAIVEESETFIKGKERKTYQRRREGGQEEDACHLPQNQTDGGEVVQDVNSSVQM
VMMEQLDPTLLQMKTEVMEGAVAPEAEAAVDDTQIITLQVVNMEEQPINIGELQLVQVPV
PVTVPVATTSVEELQGAYENEVSKEGLAESEPVICHTLPLPEGFQVVKVGANGEVETLEQ
GELPPQEDPSWQKDPDYQPPAKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEV
NAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCG
RAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYAS
VEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSG
TMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERY
ALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDM
HFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENGGETKKSKRGRKR
KMRSKKEDSSDSENAEPDLDDNEDEEEPAVEIEPEPEPQPVTPAPPPAKKRRGRPPGRTN
QPKQTQPTAIIQVEDQNTGAIENIIVEVKKEPDAEPAEGEEEEAQPAATDAPNGDLTPEM
ILSMMDR
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgaggcggttgaagccattgtggaagagtctgaaactttcattaaaggaaag
gagagaaagacttaccagagacgccgggaagggggccaggaagaggacgcttgccacctt
ccccagaaccagactgatggtggtgaggtggtccaggatgtcaatagcagtgtacagatg
gtgatgatggaacagctggatcctacccttcttcagatgaagactgaagtcatggagggt
gcagttgctccagaagcggaggctgccgtggatgatacccagattataaccttgcaggtt
gtaaatatggaggaacagcctatcaacataggagagcttcagcttgtacaagtacctgtt
cctgtgactgtacctgttgctaccacttcagtagaagaacttcagggggcttatgagaat
gaagtgtctaaagagggccttgcagaaagtgaacctgtgatatgtcacaccttacctttg
cctgaagggtttcaagtggtaaaagtgggggccaatggagaggtggagaccctagagcaa
ggggaacttccgcctcaggaagatcctagttggcaaaaagacccagactatcagccacca
gccaaaaaaacaaagaaaaccaaaaagagcaaactgcgttacacagaggagggcaaagat
gtggatgtgtctgtgtatgattttgaggaagagcagcaggagggtctgctgtcagaggtt
aatgcagagaaagtggttggtaacatgaagcctccaaagccaacaaaaattaaaaagaaa
ggtgtaaagaagacattccagtgtgagctttgcagttatacatgtccacggcgttcaaat
ttggatcggcatatgaaaagtcacactgatgagagaccacataagtgccatctctgtggc
agggcattcagaacagtcacccttctgaggaatcaccttaatacacacacaggtactcgt
cctcacaagtgcccagactgtgatatggcctttgtgactagtggagaattggtgcggcat
cgtcgttacaaacacacccatgagaagccatttaagtgttccatgtgcgattatgccagt
gtagaagtcagcaaattaaaacgtcacattcgctctcatactggggagcgtcctttccag
tgcagcttgtgcagttatgccagcagggacacatacaagctgaaaaggcacatgcgaacc
cattcaggggaaaaaccttatgaatgttatatttgtcatgcacggtttacccaaagtggt
accatgaagatgcacattctacagaagcacacagaaaatgtggccaaatttcactgtccc
cactgtgacactgtcatagcccggaaaagtgatctgggtgtccacttgcgaaagcagcat
tcctacattgagcagggcaagaaatgccgatactgcgatgctgtgtttcatgagcgctat
gccctcatccagcaccagaagtcacacaagaacgagaagcgctttaagtgtgatcagtgt
gattacgcttgtagacaggagaggcacatgatcatgcacaagcgcacccacactggggag
aagccttacgcctgcagccactgcgacaagaccttccgccagaaacagctcctcgacatg
cacttcaaacgctatcatgaccccaactttgtccctgcggcctttgtctgttctaagtgt
gggaaaacatttacacgccggaatactatggcaagacatgcggataattgtgctggtcca
gatggtgtagaaggggaaaatggaggagaaacgaagaagagtaaacgtggaagaaagaga
aagatgcgttctaaaaaggaggactcctctgacagtgaaaatgctgagccagacttggat
gacaatgaggatgaggaggagcctgccgtggagattgaacccgagccagagccccagcca
gtgaccccagccccaccacctgccaagaaacggagaggacgcccccctggcagaaccaac
cagcccaaacagacccagccaacagccatcattcaggtcgaagaccagaatacaggtgca
attgagaacattatagttgaagtcaaaaaagagccagatgcagagcctgcggagggggag
gaagaggaggcccagccagctgccacagatgcccccaacggagacctcacgcctgagatg
atcctcagcatgatggaccggtga
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