Capra hircus (goat): 102184930
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Entry
102184930 CDS
T02910
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
chx
Capra hircus (goat)
Pathway
chx03030
DNA replication
chx03410
Base excision repair
chx03420
Nucleotide excision repair
chx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102184930 (RFC5)
03410 Base excision repair
102184930 (RFC5)
03420 Nucleotide excision repair
102184930 (RFC5)
03430 Mismatch repair
102184930 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chx03032
]
102184930 (RFC5)
03036 Chromosome and associated proteins [BR:
chx03036
]
102184930 (RFC5)
03400 DNA repair and recombination proteins [BR:
chx03400
]
102184930 (RFC5)
DNA replication proteins [BR:
chx03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
102184930 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
102184930 (RFC5)
Chromosome and associated proteins [BR:
chx03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
102184930 (RFC5)
DNA repair and recombination proteins [BR:
chx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
102184930 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
102184930 (RFC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_24
AAA_11
AAA_22
AAA_16
AAA_assoc_2
AAA_lid_RFC1
RuvB_N
DUF815
AAA_14
DEAD
nSTAND_NTPase5
ResIII
AAA_5
AAA_19
ATPase_2
nSTAND3
TniB
AAA_30
PhoH
TIP49
AAA_7
DNAX_ATPase_lid
IstB_IS21
Thioredoxin_6
bpMoxR
NPHP3_N
AAA_3
ABC_tran
AAA_28
Motif
Other DBs
NCBI-GeneID:
102184930
NCBI-ProteinID:
XP_005691521
UniProt:
A0A452EXR1
LinkDB
All DBs
Position
17:14032264..14042669
Genome browser
AA seq
339 aa
AA seq
DB search
METSAHKQQQPEAAKIRNLPWVEKYRPQTLDDLISHQDILSTIQKFISEDRLPHLLLYGP
PGTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFKL
VILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPEL
MVPRLEHVVEEEKVDISEDGMKALITLSSGDMRRALNILQSTNMAFGKVTEDTVYTCTGH
PLKSDIASILDWMLNQDFTTAYRNIMELKTLKGLALHDILTEIHLFVHRVDFPSSVRIHL
LTKMADIEYRLSVGTSEKIQLSSLIAAFQVTRDLIVTEA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggagacctcagcgcacaagcagcagcagcctgaggcggccaagatcagaaacctgccc
tgggttgaaaaataccggccacagacactggatgatctcatttctcatcaggacatcttg
agtactattcagaagtttatcagtgaggaccgcctgccgcacctccttctgtatggtcct
ccagggacaggaaagacatccaccatcctggcctgtgctaaacagctgtacaaagataag
gaatttggctccatggtcttggagctgaatgcttcagatgaccgaggaatagatattgtt
cggggaccaatcctgagctttgctagcacaaggacaatatttaagaaaggctttaaacta
gtgatcttggatgaggccgatgccatgactcaggacgcccagaacgccctgcggagagtg
attgagaagtttactgaaaataccagattttgcctcatctgtaactatctgtcaaagatc
attcccgccttgcagtcccggtgtacaagattccgatttggaccactgactcccgaactc
atggttccccgcctggaacacgtcgtagaagaagagaaagttgatataagtgaagatggg
atgaaagcgctcataactctttccagtggagacatgcgaagggctctgaacatcttacag
agcaccaacatggcctttgggaaggtcacagaggacaccgtctacacctgcacaggacac
ccactcaagtcagacatcgccagcattctggactggatgttgaatcaagacttcaccacg
gcctacaggaatatcatggagttaaaaactctgaaggggttggcgttacacgacatcctg
acggagatacacctgttcgtgcacagagttgactttccatcttcagttcgaatacattta
ttgaccaaaatggcagacattgagtacagactttctgttggcaccagtgagaagattcag
ctgagttccctcattgccgcttttcaagtcaccagagacctgattgtcactgaggcctag
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