Capra hircus (goat): 102185565
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Entry
102185565 CDS
T02910
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
chx
Capra hircus (goat)
Pathway
chx03013
Nucleocytoplasmic transport
chx03015
mRNA surveillance pathway
chx03040
Spliceosome
chx05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102185565 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
102185565 (NCBP1)
03015 mRNA surveillance pathway
102185565 (NCBP1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102185565 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chx03019
]
102185565 (NCBP1)
03041 Spliceosome [BR:
chx03041
]
102185565 (NCBP1)
Messenger RNA biogenesis [BR:
chx03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
102185565 (NCBP1)
Spliceosome [BR:
chx03041
]
Common components
Common spliceosomal components
Cap binding complex
102185565 (NCBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
Cob_adeno_trans
Jnk-SapK_ap_N
DUF2524
Motif
Other DBs
NCBI-GeneID:
102185565
NCBI-ProteinID:
XP_017907689
EnsemblRapid:
ENSCHIG00000020139
UniProt:
A0A452FCQ9
LinkDB
All DBs
Position
8:62500829..62538674
Genome browser
AA seq
790 aa
AA seq
DB search
MSRRRHSDENDGGQPHKRRKTSDANETEDHLESLICKVGEKSACSLESNLEGLAGVLEAD
LPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKSNN
FNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLPWV
GKELYEKKDAEMDRIFASTESYLKRRQKTHVPMLQVWTAEKPHPQEEYLDCLWAQIQKLK
KDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEG
PVMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLVSYPGKNKIPLNYHIVEVIFAELF
QLPAPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFSHH
LSNFQFRWSWEDWSDCLTQDPESPKPKFVREVLEKCMRLSYHQRILDFVPPTFSALCPAN
PTCIYKYGDESSNSLPGHSVALCLAVAFKSKATNDEIFSILKDVPNPNQDDDDDEGFSFN
PLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVMFEVWRNHPQM
IAVLVDKMIRTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKMNKHVLKIQKELE
EAKEKLARQHKRRSDDDDRSSDRKDGALEEQIERLQEKVESAQSEQKNLFLVIFQRFIMI
LTEHLVRCETDGTSVLTPWYKNCIERLQQIFLQHHQTIHQYMVTLENLLFTAELDPHILA
VFQQFCALQA
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcggcggcacagcgacgagaacgatgggggacaacctcacaaaaggagaaag
acctctgatgcaaatgaaactgaagatcacttggaatctttaatatgcaaagtaggagaa
aagagtgcctgctctttggagagcaacctagaaggcttggctggtgttttggaagctgat
cttcctaattacaagagcaagatcttaaggcttctttgtacagttgcacgtcttttacct
gagaagttgaccatttatacaacattagttggactactgaatgccaggaattacaacttc
ggtggagaatttgtagaagccatgattcgccaactgaaagaatcattgaaatcaaacaat
tttaatgaagctgtatatttggtccgttttctgtctgatcttgtgaactgtcatgtcatt
gctgccccatcaatggttgctatgtttgaaaattttgtaagtgtaactcaggaagaagat
gtgccccaggtgcgacgggattggtacgtgtatgcgtttctgtcgtccttgccctgggtt
ggaaaggagttgtatgaaaagaaagatgcagagatggaccgaatctttgccagcactgaa
agctatcttaaaagacgccaaaagactcatgtacccatgttacaagtatggaccgcagag
aaaccacatccgcaagaagagtatttagattgcctctgggcccagattcagaaattgaaa
aaggatcgctggcaggagcggcacatcctaagaccttatcttgcctttgacagcatcctg
tgtgaagcactgcagcacaacctgcctccattcacaccacctcctcacacagaagactcg
gtgtacccaatgccaagggtcatcttcagaatgtttgattacacagatgatcctgagggt
cctgtaatgccagggagtcattcagtggaaagatttgtaatagaagagaatcttcactgc
atcattaagtcccattggaaggaaaggaagacttgtgctgcacagctagtgagttatcct
gggaagaacaagatccccttgaactaccacatagttgaggtgatctttgcagagctgttt
cagcttccagcaccgcctcatatcgatgtgatgtacacaacacttctcattgaactgtgc
aaacttcagcctggctctctaccccaagttcttgcacaggcaactgaaatgttatatatg
cgtttggacacgatgaatactacatgtgtagacaggtttattaattggttttcccatcat
ctaagtaacttccaattccgttggagctgggaggattggtcagattgtcttactcaagat
ccagaaagtcccaaaccaaagtttgtaagagaagttctagaaaaatgtatgaggttgtct
taccatcagcgtatattagattttgtccctcctaccttctcagctctatgtcctgcaaac
ccaacctgcatttacaagtatggagatgaaagtagcaactctcttcctggacattcggtt
gccctctgtttagctgttgcctttaaaagtaaagcaaccaatgatgaaatcttcagcatt
ctcaaagacgtccctaatcctaatcaggatgatgatgatgatgaaggattcagctttaac
ccactgaaaattgaggtctttgtacagactttgctacacttagcagccaagtcgttcagc
cactccttcagtgctcttgcaaagtttcatgaagtcttcaaaaccctagctgaaagtgat
gaaggaaaattacatgttctaagagtcatgtttgaggtctggcggaaccatccacagatg
attgctgtactagtagataagatgattcgtacgcagattgttgactgtgctgcagtagca
aattggatcttctcttcagaattatctcgtgactttactagattgtttgtttgggaaatc
ttgcactccacaattcgtaagatgaacaaacacgttctcaagatccagaaagagctagaa
gaggctaaagaaaaactcgcaaggcaacacaaacggcgaagtgatgacgatgacaggagc
agtgacaggaaagatggggctcttgaagaacaaatagaaagactgcaggaaaaagtggag
tctgctcagagtgaacagaagaatctcttccttgtcatatttcagcgttttatcatgatc
ctgaccgagcacttagtacgctgtgagactgacgggaccagcgtgttaacaccatggtat
aagaactgtatagagaggctccagcagatcttcctacagcatcaccagacaatccaccag
tacatggtgaccctggagaacctgctcttcactgctgagttagacccccacatcctggct
gtgttccagcagttctgtgccctgcaggcctaa
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