Capra hircus (goat): 102185752
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Entry
102185752 CDS
T02910
Symbol
HMGB1
Name
(RefSeq) high mobility group protein B1
KO
K10802
high mobility group protein B1
Organism
chx
Capra hircus (goat)
Pathway
chx03410
Base excision repair
chx04140
Autophagy - animal
chx04217
Necroptosis
chx04613
Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102185752 (HMGB1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102185752 (HMGB1)
09143 Cell growth and death
04217 Necroptosis
102185752 (HMGB1)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
102185752 (HMGB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
chx03036
]
102185752 (HMGB1)
03400 DNA repair and recombination proteins [BR:
chx03400
]
102185752 (HMGB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
chx04147
]
102185752 (HMGB1)
Chromosome and associated proteins [BR:
chx03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
102185752 (HMGB1)
DNA repair and recombination proteins [BR:
chx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
102185752 (HMGB1)
MMR (mismatch excision repair)
Other MMR factors
102185752 (HMGB1)
Exosome [BR:
chx04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
102185752 (HMGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
NOA36
HMG_box_5
Nop14
Motif
Other DBs
NCBI-GeneID:
102185752
NCBI-ProteinID:
XP_017912105
UniProt:
A0A452F540
LinkDB
All DBs
Position
12:complement(56376438..56383261)
Genome browser
AA seq
215 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEEDEEDEEDEEEEEDEEDEEEEEDDDDE
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattctttgtg
caaacttgccgggaggagcacaagaagaagcacccggatgcttcagtcaacttctcagag
ttttctaagaagtgctcagagaggtggaagaccatgtctgctaaagagaaaggaaaattt
gaagacatggcaaaggcggacaaggcccgttacgaaagagaaatgaaaacttatatccct
cctaaaggggaaacaaaaaagaagttcaaggatcccaatgcacccaagaggcctccttcg
gcctttttcttgttttgttctgagtatcgtccaaaaatcaaaggcgaacatcctggcctg
tccattggtgatgttgcaaagaaactgggagagatgtggaataacactgctgcggatgac
aagcagccttatgagaagaaggctgctaagctgaaggaaaaatacgaaaaggatattgct
gcataccgagctaaagggaagcctgatgcagcaaaaaagggagttgtcaaggctgaaaaa
agcaagaaaaagaaggaagaggaggaagatgaggaagatgaagaggatgaggaggaagaa
gaagatgaagaggatgaggaggaagaagaagatgatgatgatgaataa
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