KEGG   Capra hircus (goat): 102185752
Entry
102185752         CDS       T02910                                 
Symbol
HMGB1
Name
(RefSeq) high mobility group protein B1
  KO
K10802  high mobility group protein B1
Organism
chx  Capra hircus (goat)
Pathway
chx03410  Base excision repair
chx04140  Autophagy - animal
chx04217  Necroptosis
chx04613  Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:chx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    102185752 (HMGB1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    102185752 (HMGB1)
  09143 Cell growth and death
   04217 Necroptosis
    102185752 (HMGB1)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    102185752 (HMGB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:chx03036]
    102185752 (HMGB1)
   03400 DNA repair and recombination proteins [BR:chx03400]
    102185752 (HMGB1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:chx04147]
    102185752 (HMGB1)
Chromosome and associated proteins [BR:chx03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    102185752 (HMGB1)
DNA repair and recombination proteins [BR:chx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     102185752 (HMGB1)
   MMR (mismatch excision repair)
    Other MMR factors
     102185752 (HMGB1)
Exosome [BR:chx04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   102185752 (HMGB1)
SSDB
Motif
Pfam: HMG_box_2 HMG_box HMG_WDHD1 NOA36 HMG_box_5 Nop14
Other DBs
NCBI-GeneID: 102185752
NCBI-ProteinID: XP_017912105
UniProt: A0A452F540
LinkDB
Position
12:complement(56376438..56383261)
AA seq 215 aa
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEEDEEDEEDEEEEEDEEDEEEEEDDDDE
NT seq 648 nt   +upstreamnt  +downstreamnt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattctttgtg
caaacttgccgggaggagcacaagaagaagcacccggatgcttcagtcaacttctcagag
ttttctaagaagtgctcagagaggtggaagaccatgtctgctaaagagaaaggaaaattt
gaagacatggcaaaggcggacaaggcccgttacgaaagagaaatgaaaacttatatccct
cctaaaggggaaacaaaaaagaagttcaaggatcccaatgcacccaagaggcctccttcg
gcctttttcttgttttgttctgagtatcgtccaaaaatcaaaggcgaacatcctggcctg
tccattggtgatgttgcaaagaaactgggagagatgtggaataacactgctgcggatgac
aagcagccttatgagaagaaggctgctaagctgaaggaaaaatacgaaaaggatattgct
gcataccgagctaaagggaagcctgatgcagcaaaaaagggagttgtcaaggctgaaaaa
agcaagaaaaagaaggaagaggaggaagatgaggaagatgaagaggatgaggaggaagaa
gaagatgaagaggatgaggaggaagaagaagatgatgatgatgaataa

DBGET integrated database retrieval system