KEGG   Capra hircus (goat): 102185829
Entry
102185829         CDS       T02910                                 
Symbol
PCDH1
Name
(RefSeq) protocadherin-1 isoform X1
  KO
K16498  protocadherin delta 1
Organism
chx  Capra hircus (goat)
Pathway
chx03273  Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:chx00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    102185829 (PCDH1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:chx01009]
    102185829 (PCDH1)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:chx04515]
    102185829 (PCDH1)
Protein phosphatases and associated proteins [BR:chx01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     102185829 (PCDH1)
Cell adhesion molecules [BR:chx04515]
 Cadherins
  Protocadherins
   102185829 (PCDH1)
SSDB
Motif
Pfam: Cadherin Protocadherin Cadherin_2 Cadherin_CELSR2_9th
Other DBs
NCBI-GeneID: 102185829
NCBI-ProteinID: XP_017905705
LinkDB
Position
7:57556729..57583603
AA seq 1237 aa
MDCRARGRRCPESALLILEPAPMGPLRHSPGPGERRLLLPTLLLALLLLLAPSPGHATRV
VYKVAEEQPPNTLIGSLAADYGFPDVGHLYKLEVGAPYLRVDGKTGDIFTTETSIDREGL
RECQNQLPGEPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLPIPEN
TNIGSLFSIPVASDRDAGPNGVASYELQVGPEAQELFGLQVAEDQEGKQPQLIVMGNLDR
ERLDSYDLTIKVQDGGNPPRASSALLRVTVLDTNDNAPKFERPSYEAELSENSPIGHSVI
QVKANDSDQGANAEIDYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAK
DRGTNPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVS
DRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVD
SGNPPLSSTNSLKVQVVDVNDNAPVFTQSITEVAFPENNKPGEVVAEVTASDADSGSNAE
LVYSLEPEPAAKGLFTISPETGEIRVKTSLDREQRESYELKVVAADRGSPSLQGTATVLV
NVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENARVQLTVEQDNGDFVI
QNGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPFITAPSN
TSHRLLTPQTRLGETVSQVTAEDIDSGVNAELTYSIAGGNPYGLFQIGSHSGAITLEKEI
ERRHHGLHRLVVKVSDRGKPPRYGTALVHLYVNETLANRTLLETLLGHSLDTPLDIDIAG
DPEYERSKQRGNILFGVVAGVVAVALLIALAVLVRYCRQREAKSGYQAGKKETKDLYAPK
PSSKVSKGNKSKGKKSKSPKPVKPVEDEDETGLQKSLKFNLMSDAPGDSPRIHLPLNYPP
GSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQVVQELPPANTFVGTGDTTSTGSEQYSDY
SYRTNPPKYPSKQLPHRRVTFSATSQAQELQDPSQHSYYDSGLEESETPSSKSSSGPRLG
PLALPEDHYERTTPDGSIGEMEHPENDLRPLPDVAMTGTCTRECSEFGHSDTCWMPGQSS
PSRRTKSSALKLSTFVPYQDRGGQEPAGAGSPSPPEDRNTKTAPVRLLPSYSAFSHSSHD
SCKDSATLEEIPLTQTSDFPPAATPASAQTAKREIYL
NT seq 3714 nt   +upstreamnt  +downstreamnt
atggactgcagggcccgcggccggcgctgcccagagtcggccctcctgattctggagcct
gccccaatggggcccctgaggcacagcccagggcccggggagcgacgtctgctgctgcct
accctgctgctagcactgctgctgctgctggctccatccccgggccatgccactcgggtg
gtatacaaggtggctgaggaacagccgcccaataccctcatcgggagcctcgctgccgac
tacggttttcccgacgtgggccatctgtacaaactagaggtgggcgccccgtacctgcgg
gtggatggcaagacgggcgacatctttaccactgagacctctatcgaccgtgaggggctc
cgtgaatgccagaaccagctccctggtgagccctgcatcctggagtttgaggtgtctatc
acggacctcgtgcagaatggcagcccccggctgctggagggccagatagaggttcaggac
atcaatgacaacacgcccaacttcgcctcaccagtcatcacactgcccatccccgagaac
accaacatcggctcactcttctccatcccagtggcttcagaccgagatgctggccccaac
ggagtggcgtcatatgagctgcaggtggggcccgaggcccaggagctatttgggctgcag
gtggcagaggaccaggaggggaagcagccgcagctcatcgtgatgggcaacctggaccgg
gaacgcctggactcttacgacctcaccatcaaggtgcaggatggtggcaaccccccacgt
gccagcagtgccctgcttcgggtcaccgtgctcgacaccaatgacaatgcccccaagttc
gagcggccgtcctatgaggctgagctgtctgagaacagccccataggccactcagtcatc
caggtgaaggccaatgactcagaccaaggtgccaacgcagagatcgactacactttccac
caggcgcctgaagtcgtgagacgccttctgcgactggacaggaacaccggacttatcact
gtgcagggccccgtggaccgtgaggacctgagcaccctgcgtttctcggtgcttgccaag
gaccgtggcaccaaccccaagagtgcccgagcccaggtggtggtgactgtgaaggacatg
aacgacaatgcacccaccatcgagatccgtggcatagggctggtgacgcaccaggacggg
atggccaacatctcagaggatgtggcggaagagacagctgtggccctggtgcaggtatct
gacagagacgagggagagaatgcggctgtcacctgtgtggtcgcaggcgatgtgcccttc
caactccgccaggccagcgagacgggaagcgacagcaagaagaagtacttcctgcaaacc
accaccccgctcgactacgagaaggtcaaagactacaccatcgagattgtggccgtggac
tcgggcaacccgccactctccagcaccaattccctcaaggtgcaggtggtggacgtcaat
gacaatgcgcctgtcttcacccagagcatcactgaggtcgctttcccagaaaacaacaag
ccgggtgaagtggttgccgaggtcactgccagtgacgccgactcgggctccaatgctgag
ctggtttactctctggagcctgagccagctgccaagggcctcttcaccatctcacctgaa
actggagagatccgggtgaagacatccctggatagggaacagagggaaagctatgagttg
aaggtggtggcagccgaccggggcagccctagtctccagggcacagccactgtcctcgtc
aacgtgctggactgcaatgacaatgaccccaagtttatgctgagtggctacaacttctcg
gtgatggagaacatgccagcactgagtccggtgggcatggtgactgtcattgatggggac
aagggggagaacgcacgggtgcagctcacggtggagcaggacaacggtgactttgttatc
cagaatggcacgggcaccatactctccagcctgagcttcgatcgggagcagcaaagcacc
tataccttccaactgaaagctgtggacggtggtgtcccacctcgctcagcttacgttggt
gtcaccatcaacgtgctggatgagaatgacaacgcgccttttatcactgccccttccaac
acctcccaccggctgctgaccccacagacccgtctgggtgagacggtcagccaggtgaca
gctgaggacattgactctggtgtcaatgctgagctgacctacagcatcgctggtggcaac
ccttatggacttttccagattgggtcacattctggtgccatcaccctggagaaggagatt
gagcgccgccaccatgggctgcaccgcttagttgtgaaggtcagtgaccgcggcaagccc
ccacgctacggcacagccttggtccacctatatgtcaatgagactctagccaaccgcacg
ctgctggagaccctactgggccacagcttggacacgccactggacatcgacatcgccggg
gacccagaatacgagcgctccaagcagcgtggcaacatcctctttggcgtggtggctggt
gttgtggccgtggccttgctcatcgccctggctgtgctcgtgcgctactgccggcaacgg
gaggccaagagtggctaccaggctggcaagaaggagaccaaggacctgtacgcccccaag
cccagcagcaaagtttccaagggcaacaaaagcaagggcaagaagagcaagtctcccaag
cccgtgaaaccagtggaggatgaggatgagactggcctgcagaagtctctcaagttcaac
ctgatgagcgacgcccccggggacagtccgcgcatccacctgcccctcaactacccacca
ggcagccctgacctgggtcgccactatcgttctaattccccactgccttccatccagttg
cagccccagtcgccctctgcctccaagaagcaccaggtggtgcaggaactgccacctgca
aacacattcgtgggcaccggggacacgacgtccacgggctctgagcagtactccgactac
agctaccgcaccaacccccccaaataccccagcaagcagttacctcaccgccgcgtcacc
ttctccgccaccagccaggcccaggagctgcaggacccgtcccagcatagttactacgat
agtggcctggaggagtccgagacgccatccagcaagtcgtcgtcagggccccgactgggt
cccctggctctgcctgaggatcactatgagcgcaccacccctgatggcagcataggagag
atggagcaccctgagaatgacctgcgccctctgcctgatgtcgccatgacgggcacctgt
acccgcgagtgcagcgagtttggccactccgacacgtgctggatgccaggccagtcgtct
cccagccgccggaccaagagcagcgccctcaaactctccaccttcgtgccttaccaggac
cgaggagggcaggagcctgcgggcgccggcagccccagccccccggaagaccggaacacc
aaaacggcccccgtgcgcctcctgccctcctacagtgccttctcccacagtagccatgat
tcctgcaaggactcggccaccttggaggaaatccccctgacccagacctcggacttccca
cctgcagccacaccggcatctgcccagacggccaagcgtgagatctacctgtga

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