Capra hircus (goat): 102185888
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Entry
102185888 CDS
T02910
Symbol
ABCA4
Name
(RefSeq) retinal-specific ATP-binding cassette transporter
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
chx
Capra hircus (goat)
Pathway
chx02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
102185888 (ABCA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chx02000
]
102185888 (ABCA4)
Transporters [BR:
chx02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
102185888 (ABCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
AAA_15
DUF4162
AAA_29
Motif
Other DBs
NCBI-GeneID:
102185888
NCBI-ProteinID:
XP_017901271
LinkDB
All DBs
Position
3:complement(71012897..71151344)
Genome browser
AA seq
2221 aa
AA seq
DB search
MPSAGMLPWLQGIFCNVNNPCFQSPTAGESPGIVSNYNNSILARVYRDFQELLMDAPESQ
HLGQVWKELCTLSQLMNTLRMHPERIAGRGIRVRDVLKDEETLTLFLVKNIGLSDSVVYL
LVNSQVRPEQFARGVPDLMLKDIACSEALLERFLIFPQRRAAQTVRGSLCPLSQGTLQWM
EDTLYANVDFFKLFHVFPRLLDSSSQGMNLRSWGRILSDMSPRIQEFIHRPSVQDLLWVT
RPLVQTGGPETFTQLMGTLSDLLCGYPEGGGSRVFSFNWYEDNNYKAFLGIDSTRKDPIY
SYDERTTTFCNALIQSLESNPLTKIAWRAAKPLLMGKILFTPDSPATRRILKNANSTFEE
LERVRKLVKVWEEVGPQIWYFFDKSTQMTMIRDTLENPTVKAFWNRQLGEEGIIAEAILS
FLYKGPREGQADDVGNFNWRDIFNITDRALRLANQYLECLILDKFESYDDEFQLTQRALS
LLEENRFWAGVVFPDMHPWTSSLPPHVKYKIRMDIDVVEKTNKIKDRYWDSGPRADPVED
FRYIWGGFAYLQDMVEQGITRSQAREEVPVGIYLQQMPYPCFVDDSFMIILNRCFPIFMV
LAWIYSVSMTVKSIVLEKELRLKETLKNQGVSNRVIWCTWFLDSFSIMSMSICLLTIFIM
HGRILHYSNPFVLFLFLLAFSIATIMQCFLLSTFFSRASLAAACSGVIYFTLYLPHILCF
AWQDRITADMKMAVSLLSPVAFGFGTEYLARFEEQGVGLQWSNIGNSPMEGDEFSFLMSM
KMMLLDAALYGLLAWYLDQVFPGDYGTPLPWYFLLQESYWLGGEGCSTREERAWEKTEPI
TEEMEDPEHPEGINGCFFERELPGLVPGVCVKNLVKIFEPYGRPAVDRLNITFYESQITA
FLGHNGAGKTTTLSIMTGLLPPTSGTVLVGGKDIETNLDAIRQSLGMCPQHNILFHHLTV
AEHILFYAQLKGRSWDEAQLEMEAMLEDTGLHHKRNEEAQDLSGGVQRKLSVAIAFVGDA
KVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADILGDRIAIISQGRLYC
SGTPLFLKNCFGTGFYLTLVRKMKTIQSQGRGCEGTCSCASKGFSVRCPACAEPMTPEQV
LDGDVNELMDMVRHHVPEAKLVECIGQELIFLLPNKNFKQRAYASLFRELEETLADLGLS
SFGISDTPLEEIFLKVTEDLDSGHLFAGGTQQKRENINLRHPCLGPSEKARQTPQGSSSH
PGEPAAHPEGQPPPEQEGHSRLNSGARLVVQHVHALLVKRFQHTIRSHKDFLAQIVLPAT
FVFLALMLSLIIPPFGEYPALTLHPWMYGQQYTFFSMDQPDSEWLSALADVLVNKPGFGN
RCLKEEWLSEFPCGNSSPWKTPSVSPDVTHLLQQQRWTADQPSPACRCSTREKLTMLPEC
PEGAGGLPPPQRTQRSTEILQDLTDRNVSDFLVKTYPALIRSSLKSKFWVNEQRYGGISI
GGKLPAPRITGEALVGFLSDLGQLMNVSGGPMTREAAKEMPAFLKQLETEDNIKVWFNNK
GWHALVSFLNVAHNAILRASLHKDKNPEEYGITIISQPLNLTKEQLSEITVLTTSVDAVV
AICVIFAMSFVPASFVLYLIQERVNKAKHLQFVSGVSPTTYWLTNFLWDIMNYTVSAALV
VGIFIGFQKKAYTSSDNLPALVALLMLYGWAIIPMMYPASFLFDIPSTAYVALSCANLFI
GINSSAVTFVLELFENNRTLLRINAMLRKLLIIFPHFCLGRGLIDLALSQAVTDVYARFG
EEHSSNPFQWDLIGKNLAAMAIEGVVYFLLTLLIQYQFFFSRWTTEPAKEPVIDEDDDVA
EERQRIISGGNKTDILRLNELTKVYSGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTF
KMLTGDTPVTSGDATVTGKSILTNISDVHQSMGYCPQFDAIDDLLTGREHLYLYARLRGV
PAEEIERVTNWSIQSLGLSLYADCLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMD
PQARRMLWNTIMGIIREGRAVVLTSHSMEECEALCTRLAIMVKGAFQCLGTIQHLKSKFG
DGYIVTMKIRSPKDDLLPDLGPVEQFFQGNFPGSVQRERHHNMLQFQVSSSSLARIFRLL
VSHKDSLLIEEYSVTQTTLDQVFVNFAKQQNETYDLPLHPRAAGASRHAKEVDKGNSAPQ
G
NT seq
6666 nt
NT seq
+upstream
nt +downstream
nt
atgccctcagcaggaatgttgccatggctccagggaattttctgcaatgtgaacaatcct
tgttttcaaagtcctactgcaggagaatctcctggaattgtgtcaaactataacaactcc
atcttggcaagggtgtatagagattttcaagaactcctcatggatgcaccagagagccag
caccttggtcaggtttggaaagaactctgcaccttgtcccagctcatgaacaccctccga
atgcaccccgagaggattgcaggaagaggaatacgagttcgggatgtcctaaaggatgag
gaaacactgacactgtttctcgtgaagaacatcggtctgtctgactcagtcgtctacctt
ctggtcaactcccaagtccgtcccgagcagtttgcccgtggagtcccagacctgatgctg
aaggacatcgcctgcagcgaggccctcctggagcgtttcctgatctttccccagcgccgt
gcagcccagacagtgcgcggcagcttgtgccccctctctcagggcaccctgcagtggatg
gaagacaccctgtatgccaacgtggacttcttcaagctcttccacgtgtttcccagactc
ctagacagcagttctcaaggtatgaatctgagatcctggggaagaatattatctgatatg
tcaccaagaattcaagaattcatccaccggccaagtgttcaagacttgctatgggtgacc
agaccactcgtgcagactggaggcccggagaccttcacgcaactgatgggcaccctctct
gacctcctgtgtggctacccagagggaggaggatctcgggtgttctccttcaactggtac
gaagacaataactataaggcctttctagggatcgactccacaaggaaagatcctatctat
tcttatgacgaaagaacaacgaccttttgtaatgcattgatccagagcctggagtcaaac
cctctaaccaaaatagcctggagggcagcaaagcctttgctgatgggaaaaatcctcttt
actccagattcccctgcaacacgcaggatcctgaagaatgctaattcgacgtttgaagag
ctggagcgtgtcaggaagttggtcaaagtctgggaagaagtagggccccagatctggtac
ttctttgacaagagcacacagatgaccatgatcagagacactctggagaacccaacagta
aaagctttttggaataggcagcttggtgaggaaggcatcattgctgaagccatcctgagc
ttcctctataaggggcctcgagagggccaggctgacgatgtgggcaacttcaactggagg
gatatatttaacatcaccgatcgtgccctacgcctggctaatcaatatctggagtgcttg
atcctggataagtttgaaagctatgatgatgaatttcaactcactcagcgagccctgtcc
ctgctggaggaaaacaggttctgggctggagtggtgtttccggacatgcacccctggacc
agttccttaccgccccatgtgaagtacaagatccgaatggacatagatgtggtggagaaa
accaataagatcaaagacaggtactgggattccggccccagagctgatcctgtggaagac
ttccgatacatctggggagggtttgcctatctgcaggacatggttgaacaggggatcaca
aggagtcaggcccgggaggaggttccagttggaatctatctccagcagatgccttacccc
tgcttcgtggatgactcttttatgatcatcctgaaccgctgtttccctatcttcatggtg
ctggcctggatctactctgtctccatgactgtaaagagcattgtcttggagaaggagttg
agactgaaggaaaccttgaaaaatcagggtgtctccaacagggtgatttggtgtacctgg
ttcctggacagcttctctatcatgtcgatgagcatctgcctgctgacgatattcatcatg
catggaaggatcctgcattacagcaatccgttcgtcctcttcctgttcctgttggctttc
tccattgctacgatcatgcagtgcttcctgctcagcaccttcttctccagggccagtctg
gcagcagcctgtagtggtgtcatctacttcaccctctacctgccacacattctctgcttc
gcttggcaggaccgaattacagccgacatgaagatggctgtgagcctgctgtctcctgtg
gcatttgggtttggcactgagtacctggctcgttttgaagagcaaggtgtggggctgcag
tggagcaatattgggaatagtcccatggaaggggatgaattcagttttctgatgtccatg
aagatgatgctccttgatgctgctctgtatggcttgcttgcctggtatcttgaccaggtg
tttccaggggactatggaaccccacttccttggtacttccttctacaagagtcttactgg
ctaggtggtgaagggtgttcaaccagagaagaaagagcctgggaaaagacagaacccata
acagaggaaatggaggacccagaacacccagaaggaataaatggctgcttctttgaacgt
gagcttccaggcctggttcccggagtatgtgtgaagaatctggtaaagatatttgagccc
tatggcaggccagccgtggaccgtcttaacattaccttctatgaaagtcagattaccgca
ttcctcggtcacaatggagcagggaaaaccaccaccttgtccatcatgactggtctgctg
ccaccgacatccgggactgtgcttgttgggggaaaggacattgaaaccaacctggatgct
atccggcagagccttggcatgtgtccacagcacaacatcctgttccaccacctcaccgtg
gctgaacacatcctgttctacgcgcagctgaaagggaggtcctgggacgaggcccagctg
gagatggaagccatgctggaggacacaggcctccaccacaagaggaacgaagaggctcag
gatctatcaggtggcgtgcagaggaagctgtccgtggccattgccttcgtgggagatgcc
aaggtggtggttctggatgagcccacctctggggtggacccctactcacgtcgctcaatc
tgggacctgctcctgaagtatcgctcaggcagaaccatcatcatgtccactcaccacatg
gacgaggccgacatcctcggggaccgcatcgccatcatatcccagggacggctctactgc
tctggaaccccactgttcctgaagaactgctttggcacaggcttctacttaaccttggtg
cgcaagatgaagactattcagagccaaggaagaggctgcgaggggacctgcagctgtgcg
tctaagggcttctctgtcaggtgtccagcctgtgctgagccgatgactccagaacaagtc
ttggacggggatgtgaatgaactgatggatatggttcgccaccacgttccagaggcgaag
ctggtagaatgcatcggtcaagaactcatcttccttcttccaaataagaatttcaagcag
agagcatatgctagccttttcagagagctggaggagacgctggctgacctgggactcagc
agttttggaatttctgacactcccctggaagagattttcctgaaggtcacagaggatttg
gattcaggacatctgtttgctggaggcactcagcagaaaagagaaaacatcaaccttcga
cacccctgtttgggtcctagcgagaaggccagacagactccccagggctccagcagccac
cccggggagccagctgctcacccggagggccagcctccaccggagcaggagggacacagc
cgactgaactcaggagcgcggcttgtcgtccagcacgtgcacgctctgctggtcaagagg
ttccagcacaccatccgcagccacaaggacttcctggcgcagattgtgctcccagccact
tttgtgtttttggctctaatgctttccctcatcatccctccttttggtgaatatcctgct
ctgacccttcacccctggatgtatggacagcagtacaccttcttcagcatggaccagccg
gacagtgaatggctctcagcacttgcagatgtccttgtgaataagccaggctttggcaac
cgctgcctgaaggaagagtggctttcggagttcccctgtggaaattcaagcccctggaag
actccatctgtgtccccggacgtcacccacttgctccaacagcagagatggacagcggac
caaccttcacctgcctgcaggtgcagcaccagagagaagctcaccatgctccctgagtgc
cctgagggcgcagggggcctcccacccccgcagagaacgcaacgcagcactgaaattctg
caggaccttacagacaggaatgtctccgacttcctggtaaaaacataccctgctcttatc
cgaagcagtttgaagagcaaattctgggtcaatgaacagaggtatggaggaatttctatt
ggaggaaagctcccagctccccgcatcactggagaagcacttgtcggatttctaagtgac
cttggccagttaatgaatgtgagcgggggccctatgaccagagaggccgctaaagaaatg
cctgctttccttaaacaactagaaactgaagacaacattaaggtgtggtttaacaacaag
ggttggcatgctctggtcagcttcctcaacgtggcccacaacgccatcttacgggctagc
ctgcacaaggacaagaaccccgaggagtatggcatcaccatcataagccagcccttgaac
ctgaccaaggagcagctctctgagatcacagtactgaccacttcggtggacgctgtagtg
gccatctgcgtgatttttgccatgtccttcgtccctgccagctttgtcctttatttgatc
caggagagggtgaacaaggccaagcacctccagtttgtcagtggagtgagccccaccacc
tactggctgaccaacttcctctgggacatcatgaattacactgtaagtgctgcgctggtg
gtgggcatcttcatcgggtttcagaagaaagcctacacttcttcagacaaccttccagcc
cttgttgcactgcttatgctatatgggtgggcaatcattcccatgatgtacccggcatcc
ttcctgttcgatatccccagcactgcctatgtggccttatcatgtgctaatctgttcatt
ggcatcaacagcagtgccgtcacttttgtcctggaattatttgagaataaccggacgctg
ctcaggatcaatgccatgctgaggaagctgctcattatcttccctcacttctgcctgggc
cggggtctcattgacctggcactgagccaggcagtgacagacgtctatgcccggtttggt
gaggagcactcttcaaatccattccagtgggacctgattgggaagaacctggctgccatg
gcaatagaaggtgtggtgtacttcctcttgacgctcctcatccaataccagttcttcttc
agccgatggactactgagcctgcaaaggagcccgtcatagatgaagatgatgatgtggct
gaagaaagacagagaattattagtggaggaaataaaactgatatcttacggctaaatgaa
ctcaccaaggtttattcaggcacctccagcccagcagtggacaggctgtgtgtgggagtc
cgccccggagagtgctttggcctcctgggagtgaatggagctggcaaaacaaccacgttc
aagatgctcactggggacacgccagtgacctcaggcgatgccactgtcacgggcaagagt
attttgaccaatatttctgacgtccatcaaagtatgggctactgtcctcagtttgatgca
atcgatgacctgcttacagggcgagaacatctttacctttatgcccggcttcgaggtgta
ccagcagaggaaattgagagggtgacaaactggagtattcagagcctgggcctgtctctc
tatgcagactgcctggctggcacctacagtggaggaaataagcggaagctctccacagcc
attgcgctcataggctgcccaccattggtgctgctggatgagcccaccacaggcatggac
ccccaggcgcgccgcatgctgtggaacactatcatgggcatcatcagagaagggagagcc
gtggtcctcacttcccacagcatggaagagtgcgaggccctgtgtacccggctggccatc
atggtgaagggcgcctttcagtgtctgggcaccatccagcacctcaagtccaagtttgga
gacggctacattgtcacgatgaaaatcagatccccaaaggacgacttgcttcctgacctg
ggccccgtggagcagttcttccagggcaacttcccaggcagcgtccagagagagaggcac
cacaacatgctgcagttccaggtctcctcctcctccctggccaggatcttccggctgctc
gtctcgcacaaggatagcctgctcattgaggagtactcggtcacgcagaccaccctggac
caggtatttgtgaactttgctaaacagcagaatgaaacttacgacctccctttgcaccct
cgagctgcaggagccagccgacacgccaaggaagtggacaaagggaattctgcacctcaa
ggatga
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integrated database retrieval system
