KEGG   Capra hircus (goat): 102186192
Entry
102186192         CDS       T02910                                 
Symbol
NXF1
Name
(RefSeq) nuclear RNA export factor 1
  KO
K14284  nuclear RNA export factor
Organism
chx  Capra hircus (goat)
Pathway
chx03008  Ribosome biogenesis in eukaryotes
chx03013  Nucleocytoplasmic transport
chx03015  mRNA surveillance pathway
chx05014  Amyotrophic lateral sclerosis
chx05164  Influenza A
chx05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:chx00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102186192 (NXF1)
   03015 mRNA surveillance pathway
    102186192 (NXF1)
   03008 Ribosome biogenesis in eukaryotes
    102186192 (NXF1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    102186192 (NXF1)
   05168 Herpes simplex virus 1 infection
    102186192 (NXF1)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    102186192 (NXF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:chx03019]
    102186192 (NXF1)
   03009 Ribosome biogenesis [BR:chx03009]
    102186192 (NXF1)
Messenger RNA biogenesis [BR:chx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     102186192 (NXF1)
   mRNA cycle factors
    Stress granule specific factors
     102186192 (NXF1)
Ribosome biogenesis [BR:chx03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    102186192 (NXF1)
SSDB
Motif
Pfam: LRR_NXF1-5 NXF_NTF2 Tap-RNA_bind TAP_C NTF2 UBA_8 LRR_4 LRR_8 LRR_9
Other DBs
NCBI-GeneID: 102186192
NCBI-ProteinID: XP_017898448
UniProt: A0A452E2P7
LinkDB
Position
29:complement(41429703..41441323)
AA seq 620 aa
MADEGKSYNEHDDRVSFPQRRKKGRGPFRWKSGEGNRRSGRGGSSVRSSRLEDDDRDVAM
SDVQDAPRVRYTPYAARPNRRGDNWNERTRIHVTLPLRRDRGAAERGGAGTSQDGSSKNW
FKITIPYGRKYDKSWLLNVIQSKCSVPFTPIEFHYENTRAQFFVEDASTASALKAVNYKI
LDRENRRISIIINSSSPPHSVQNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLV
SQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNKLYRLDDLSSIVQKAPNLKILNLS
GNELKSERELDKIKGLKLEELWLDGNTLCDTFRDQSTYISAVRERFPKLLRLDGHELPPP
IAFDVEAPTTLPPCKGSYFGTETLKNLVLHFLQQYYAVYDSGDRQRLLDAYHDGACCSLS
IPFTPQNPARSNLAEYFKDSRNVKKLKDPTLRFRLLKHTRLNVVAFLNELPKTQHDINSF
VVDISAQTSTLLCFSVNGVFKEVDGKSRDSLRAFTRTFVAVPASNSGLCIVNDELFVRNA
SADEIQRAFAMPAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNIEWSQKCLQDNNWDYTRS
AQAFTHLKAKGEIPEVAFMK
NT seq 1863 nt   +upstreamnt  +downstreamnt
atggcggacgaggggaagtcatacaacgagcacgatgatcgagttagtttccctcaaaga
agaaagaaaggccggggccctttccggtggaagtccggcgaggggaaccggaggtccgga
agagggggctccagcgttcggtcctcccgcctggaggacgacgacagagacgtggcgatg
agcgatgtccaggatgctccccgagtacgatacaccccctatgctgcacgacccaaccgt
cggggtgataactggaacgagcggactcggattcatgttactctgcccctgcggagggat
cggggtgctgcagagaggggaggggctggcaccagccaggacgggtcgtccaagaactgg
tttaagattacaatcccttatggcaggaaatacgacaagtcgtggctcctgaatgtgatt
cagagcaagtgcagtgttccttttactcccattgagtttcactatgaaaacacacgggcc
cagttttttgtggaggacgccagtacagcctctgcactgaaggctgttaactataagatt
ttggatcgggagaaccgcaggatatctatcatcatcaactcctcttctccaccccattct
gtgcagaatgaactgaagccagaacaagtagagcagctaaagctgatcatgagcaaaaga
tacgatggctcccagcaagcacttgacctcaagggcctccgttcagacccagatttagtg
tcccagaacattgacgttgtcctgaaccgtagaagctgcatggcagccaccctgcgaatc
atcgaagagaacatccctgagctattgtccttgaacttgagcaacaacaagctctaccgg
ctggatgacttgtccagcattgtgcagaaagcacccaatctaaagatcctaaatctctct
ggaaatgagctaaagtctgaacgggagttggacaagatcaaagggctgaagctggaagag
ctctggcttgacggaaacaccctgtgcgacaccttccgagaccagtccacctacatcagc
gccgttcgagagcgatttccaaaactactgcgactggatggccatgagttacccccacca
attgcctttgatgttgaagcccccacaacgttaccaccttgtaagggaagctactttgga
acagagaccctgaagaatctggtcctgcacttcctgcagcagtactatgcggtttatgac
tcgggagaccggcagcggctcctggatgcctaccatgatggagcctgctgctccctgagc
attcctttcaccccccagaaccctgcccgaagtaacttggccgagtacttcaaggatagc
aggaacgtgaagaagcttaaagaccctaccctgcggttccgactgctaaagcacacacgt
ctcaacgtggtggccttcctcaatgagttgcccaaaactcagcatgacatcaattccttc
gtggtagacataagtgcgcagacaagcacattgctgtgtttctctgtcaacggagtcttc
aaagaagtggatggaaagtctcgggactccttgcgagcctttacccggacgttcgtcgct
gttcctgccagcaattcagggttgtgcatcgtcaacgatgagctgtttgtgcggaatgcc
agtgctgatgagatccagagagcctttgccatgcctgcacccacaccttcctccagccca
gtgcccaccctctccccagagcagcaggaaatgctgcaggcattctctacccagtctggc
atgaacattgagtggtcccagaagtgcctccaggacaacaactgggactacaccaggtct
gcccaggcctttactcacctcaaggccaagggtgagatcccagaagtggcattcatgaag
tga

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