KEGG   Capra hircus (goat): 102186621
Entry
102186621         CDS       T02910                                 
Symbol
AMFR
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR
  KO
K10636  E3 ubiquitin-protein ligase AMFR [EC:2.3.2.36]
Organism
chx  Capra hircus (goat)
Pathway
chx04137  Mitophagy - animal
chx04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:chx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    102186621 (AMFR)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    102186621 (AMFR)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:chx04121]
    102186621 (AMFR)
Enzymes [BR:chx01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.36  RING-type E3 ubiquitin transferase (cysteine targeting)
     102186621 (AMFR)
Ubiquitin system [BR:chx04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    102186621 (AMFR)
  Multi subunit Ring-finger type E3
   ERAD complex
    102186621 (AMFR)
   LMBR1L-GP78-UBAC2 complex
    102186621 (AMFR)
SSDB
Motif
Pfam: G2BR zf-RING_2 zf-C3HC4_2 CUE zf-C3HC4 zf-RING_11 zf-C3HC4_3 zf-RING_UBOX zf-rbx1 zf-ANAPC11 zf-RING_5 zf-RING_16 Prok-RING_4 zf-C3HC4_4
Other DBs
NCBI-GeneID: 102186621
NCBI-ProteinID: XP_017917500
EnsemblRapid: ENSCHIG00000014320
LinkDB
Position
18:25584218..25629448
AA seq 647 aa
MPLLFLERFPWPSLRTYTGLSGLALVGTIVSAYRALSQPEAGPGPGPTEAEPVTAPVQPD
PAALVRPSAGGPRARDVAQYLLSDSLFVWVLVNTACCILMLVAKLIQCIVFGPLRVSERQ
HLKDKFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFAGLVFLHLMVQLCKDRFEYLSFSP
TTPMSSHGRVLSLLIAMLLSCCGLAVVCCVTGYTHGMHTLAFMAAESLLVTVRTAHVILR
YVIHLWDLNHEGTWEGKGTYVYYTDFVMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFM
QLRYLFHEVQRRIRRHKNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSMQAARKLPC
GHLFHNSCLRSWLEQDTSCPTCRMSLNIADNNRVREDHPGENLDENLVPVAAAEGRPRLN
QHNHFFHFDGSRIASWLPSFSVEVMHTTNILGITQASNSQLNAMAHQIQEMFPQVPYHLV
LQDLQLTRSVEITTDNILEGRIQVPFPTQRSESIRPALNSPVERPNGEQEDGEASVQAER
VPLDLSPRLEEALDFGELEVEPSEGEDFEARGSRFSKSADERQRMLVQRKDDLLQQARRR
FLNRSSEDDSASESCLPSEGTTSDPVTLRRRMLAAAAERRLQKQQTS
NT seq 1944 nt   +upstreamnt  +downstreamnt
atgccgctgctcttcctcgagcgcttcccctggcccagcctccgcacctacacgggcctc
agcggcctggccttggtcggcaccatcgtcagcgcctaccgcgctctcagtcagcccgag
gccgggcccgggcccgggcccacagaggcggagccggtaacggccccggtgcagccagac
ccggccgcgctcgtccggccgagcgccgggggaccccgggcccgcgacgtggcccagtac
ctgctctcggacagcctgttcgtgtgggtcctagtgaatactgcttgctgcattttgatg
ttggtggctaagctaatccagtgtatcgtgttcggccctcttcgagtgagcgaaagacag
cacctcaaagacaagttttggaattttattttctacaagttcattttcattttcggggtg
ctgaatgtccaaacagtggaagaagtggtcatgtggtgcctctggtttgctggactagta
tttctgcacctgatggttcagctctgcaaggaccggtttgaatatctttctttttctccc
accacccccatgagcagccacggccgagttctgtccctcctgatcgccatgttgctttcc
tgctgcgggttagcagtcgtctgttgcgtcacgggctacacccatgggatgcacacgttg
gctttcatggctgcagagtctcttcttgtgacagtgaggactgcccatgtgattttacga
tacgtaattcacctctgggacctcaaccatgaagggacatgggaaggaaaggggacgtat
gtctattacacagatttcgtcatggagctcactctcttgtccttggacctcatgcaccat
attcacatgttgttgtttggcaacatctggttgtccatggccagcttggtcatcttcatg
cagctgcgttacctgtttcatgaagtacagcgtcgcatccgccggcacaagaactacttg
cgagtggtcgggaacatggaagccaggtttgcagtggcaactccagaggagctggctgtc
aataacgatgactgcgccatctgctgggactccatgcaggctgcgaggaaactgccctgt
ggacatcttttccacaactcctgtcttcgttcctggctagaacaagacacctcctgcccc
acatgcaggatgtctcttaacattgctgacaataatcgtgtccgggaagaccatccagga
gagaacctggatgagaatttggttcctgtggcggcagccgaaggcagacctcgcttaaac
cagcacaatcacttcttccacttcgacgggtcccggatcgcgagttggctgccgagtttc
tcagtcgaagtgatgcacaccaccaacattctaggcattacacaggcaagcaactcccag
ctcaatgcaatggctcatcagattcaagagatgtttccccaggtgccataccacctggtg
ctacaagacctccagctgacgcgctcggttgagataacaacagacaacattctggaagga
cggattcaagtaccttttcccacacagcgatcagagagcatcaggcccgcattgaacagc
cccgtggaaaggccaaacggtgagcaggaggacggagaagcttctgttcaggccgagcgg
gtgccgctggacctcagtcctcggctggaggaggcgctggacttcggcgagctggaggtg
gagcccagtgagggggaggactttgaggcccggggcagccgcttctccaagtctgcggac
gagaggcagcgcatgctggtgcaacgcaaggatgacctcctgcagcaggcgcggaggcgt
ttcttgaacagaagttctgaagatgactcggcctcagagagctgcctcccctcagaaggg
acgacctctgaccctgtgaccctgcgtcgaaggatgctggccgctgcagccgagcggaga
cttcagaagcagcagacttcctag

DBGET integrated database retrieval system