Capra hircus (goat): 102186849
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Entry
102186849 CDS
T02910
Symbol
PCDH7
Name
(RefSeq) protocadherin-7 isoform X1
KO
K16498
protocadherin delta 1
Organism
chx
Capra hircus (goat)
Pathway
chx03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
102186849 (PCDH7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
chx01009
]
102186849 (PCDH7)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
chx04515
]
102186849 (PCDH7)
Protein phosphatases and associated proteins [BR:
chx01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102186849 (PCDH7)
Cell adhesion molecules [BR:
chx04515
]
Cadherins
Protocadherins
102186849 (PCDH7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
TMEM154
Mid2
Cadherin_pro
LYRIC
KIAA1549
MLANA
EphA2_TM
Adeno_E3_CR2
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
102186849
NCBI-ProteinID:
XP_013820027
LinkDB
All DBs
Position
6:50391430..50861108
Genome browser
AA seq
1256 aa
AA seq
DB search
MLRMRTMGWARAWCLGCCLLLPLSLSLAAAKQLLRYRLAEEGPADVRIGNVASDLGIVTG
SGEVTFSLESGSEYLKIDNLTGELSTSERRIDREKLPQCQMIFDENECFLDFEVSVIGPS
QSWVDLFEGRVIVLDINDNTPTFPSPVLTLTVEENRPVGTLYLLPTATDRDFGRNGIERY
ELLQEPGGGGGGGGEGRRAGPADSAPYPGGGGNGGSGGGPGGSKRRLDAPEGGGGTSPGG
RSSVFELQVADTPDGEKQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLIT
DVNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLR
LDETSGWLSVLHRIDREEVNQLRFTVMARDRGQPPKTDKATVVLNIKDENDNVPSIEIRK
IGRIPLKDGVANVAEDVLVDTPIALVQVSDRDQGENGVVTCTVVGDVPFQLKPASDTEGD
QNKKKYFLHTSAPLDYETTREFNVVIVAVDSGSPSLSSNNSLIVKVGDTNDNPPVFGQSV
VEVYFPENNIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPDSGDILVNTVLDR
EQTDRYEFKVNARDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVG
MVTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGD
PPRSATATVSLFVMDENDNAPTVTLPRNISYTLLPPSSNVRTVVATVLATDSDDGINADL
NYSIVGGNPFKLFEIDSTSGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFV
NESVSNATVIDSQIARSLHTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVV
MARYCRSKNKNGYEAGKKDHEDFFTPQQHDKSKKPKKDKKNKKSKQPLYSSIVTVEASKP
NGQRYDSVNEKLSDSPSMGRYRSVNGGPGSPDLARHYKSSSPLPTVQLHPQSPTAGKKHQ
AVQDLPPANTFVGAGDNISIGSDHCSEYSCQTNNKYSKQPFRRVTFSVVSQPQDPHQGSL
QSCYDSGLEESETPSSKSSSGPRLGALPLPEDNYERTTPDGSVGEAEHMENDSRPLPDVA
LTGKCTRECDEYGHSDSCWMPVRTSPERKKSQPKLSTFMPVDERGSQEKLANGEAAIMGD
RNRNLLNKKLTSSYETFSAASFSKNEDANTEDIPLTKTGEYKPSPVNTLTRREVYL
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggatgcggaccatgggatgggcgcgcgcctggtgtctgggctgctgtctcctc
ttgccgctttcgctcagcctagcggccgccaagcaactcctccggtaccgactggcagag
gagggcccagcagacgtccgcatcggcaacgtcgcctcggacttgggcatcgtgaccggc
tccggtgaggtgactttcagcctcgagtcgggctcagagtacctgaagatcgacaatctc
accggcgagctgagtacgagcgagaggcgcatcgaccgcgagaaactgccccagtgtcag
atgatcttcgacgagaacgagtgcttcttggacttcgaggtgtcggtgatcgggccctcg
cagagctgggtggacctgttcgagggtcgggtcatcgtgctcgacatcaacgacaacacg
cccaccttcccgtcacccgtgctcacgctcacggtggaggagaaccggccggtgggcact
ctctacctgctgcccaccgccaccgaccgcgacttcggccgcaatggcattgagcgctac
gagctgctacaggagcccgggggcggcggcggcggcggcggcgagggccggcgcgccggg
cctgccgacagcgccccctaccccgggggcggcgggaacggcgggagcggcggcggcccc
gggggctccaagaggaggctggacgctccagaaggcggcggcgggaccagccccggcgga
cgcagcagcgtgttcgaactgcaggtggccgacaccccggatggcgaaaagcagccgcaa
ctgatcgtgaagggggcgctggaccgcgaacagcgcgactcctacgagctgaccctgagg
gtgcgagacggtggcgacccgcctcgctcctctcaggccatcctgcgggtgctcatcacc
gacgtgaacgacaacagcccccgcttcgagaagagcgtgtatgaggctgacctggccgag
aacagcgccccgggaacccccatccttcagctgcgtgccgccgacctggacgtgggggtc
aacgggcagattgagtacgtgttcggggctgctaccgagtccgtgcggcggctgctgcgc
ctagacgagacgtccggctggctcagtgtcctgcaccgtatagaccgcgaggaagtgaac
cagctgcgcttcacggtcatggcccgcgatcgcgggcagcctcccaagacagacaaagcc
acggtggtccttaatatcaaggacgagaacgacaatgtgccgtccattgaaatccgcaag
atcgggcgtatcccactcaaggatggggtggccaacgtggccgaggacgttctggtggac
acccccatcgccctggtgcaggtgtctgaccgagaccaaggcgagaatggagtggtcacc
tgcaccgtggtgggcgacgtgcctttccagctcaagccggccagtgacacagagggcgac
cagaacaagaaaaagtacttcctgcacacctcggcccctttggactatgagaccaccagg
gagttcaacgtggtcatagtagcggtggactccggcagccccagtctctccagcaacaac
tccctgattgtcaaggtgggagacaccaacgacaacccgcctgtctttggccagtcagtg
gtggaggtgtactttcctgagaacaacatccccggagagagggtagccacggtgctggct
acagacgcggacagtgggaaaaacgctgaaatcgcctactcgctggactcttccgtgatg
gggatctttgccatcgatcccgattctggggacattctcgtcaataccgtgctggaccgc
gagcagactgacaggtacgagtttaaagttaacgccagagacaaaggcatccccgtgcta
cagggcagcaccacagtgattgttcaggtggctgacaagaatgacaatgaccctaagttc
atgcaggacgtctttaccttttatgtgaaagaaaatttacagcccaacagccccgtggga
atggtcacagtgatggatgctgacaaggggcgcaatgcagagatgagcctatacatagag
gagaacagtaacattttttccattgaaaatgacacggggactatttactccacgatgtct
tttgacagagaacatcagaccacatacactttcagagtcaaagctgtggatgggggagat
cctcccagatctgcaacagccacggtctctctctttgtgatggatgagaatgacaatgct
cccactgtcacccttcccagaaatatttcctacactttactgccaccttcaagtaacgtc
aggacagtagtagctacagtgttggcaacagacagtgatgatggcatcaatgcagacctt
aactacagcattgtgggagggaatcccttcaagctgtttgagattgattccaccagtggt
gtggtttccttagtgggaaaactcacccaaaagcattatggcttgcacaggttggtggtg
caagtgaatgacagtgggcagccttcccagtctaccacgactctggtgcatgtgtttgtc
aatgaaagtgtttctaatgcaactgtgattgactctcaaatagccagaagcttgcacacc
ccactcacccaggatatagctggtgacccaagctatgaaattagcaaacagagactcagt
attgtcattggggtggttgctggaattatgactgtgattctaatcatcttaattgtagtg
atggcaagatattgccggtccaaaaataaaaatggctatgaagccggcaaaaaagatcat
gaagacttttttacaccccaacagcatgacaaatctaaaaaacctaaaaaggacaagaaa
aacaaaaaatctaagcagccactctacagcagcattgtcactgtagaagcttctaaacca
aatggacagaggtatgacagtgtcaatgagaagctgtcagacagcccaagcatgggccga
taccgatcagttaatggtgggcctggcagtcctgacctggccaggcattacaaatctagt
tcccccttgcctactgtccagcttcacccccaatcaccaactgcaggaaaaaaacaccag
gccgtacaagatctaccaccagctaatacgtttgtgggagcaggagacaacatttcaatt
ggatcagatcactgctctgagtacagctgtcaaaccaataacaaatacagcaaacagcca
tttcgtagagtgacgttttctgttgtgagtcagcctcaggacccacatcaggggtcactg
cagagttgctatgacagcgggctggaggagtcagaaacaccaagcagtaagagttcatca
gggccaagactgggtgcccttccactcccagaggacaactatgaaaggaccacgccggat
ggcagtgttggtgaggcagagcatatggaaaatgattcaagacctcttccagatgtagcc
ctgactgggaagtgtacccgtgagtgtgatgagtacggccattccgactcctgctggatg
cctgtccgcacttctccagagaggaagaagagccagcccaaactctccactttcatgcct
gttgatgaacgaggaagccaggaaaaactggctaatggtgaggccgccatcatgggtgac
cgcaacagaaacctcctgaacaaaaagttgacctcatcctatgagaccttcagtgcggct
agtttcagcaaaaatgaggatgccaacactgaggatattccccttacaaaaacgggggaa
tacaagccatctcctgtcaatactctcactagaagagaagtttacctgtag
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