Capra hircus (goat): 102186933
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Entry
102186933 CDS
T02910
Symbol
CNTN1
Name
(RefSeq) contactin-1 isoform X1
KO
K06759
contactin 1
Organism
chx
Capra hircus (goat)
Pathway
chx04514
Cell adhesion molecule (CAM) interaction
chx04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
102186933 (CNTN1)
04517 IgSF CAM signaling
102186933 (CNTN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
chx04515
]
102186933 (CNTN1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
chx00537
]
102186933 (CNTN1)
Cell adhesion molecules [BR:
chx04515
]
Immunoglobulin superfamily
Contactins
102186933 (CNTN1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
chx00537
]
Others
102186933 (CNTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
FN3_DSCAM-DSCAML_C
Ig_5
Pur_ac_phosph_N
Sp38
C2-set_2
Ig_J_second
Interfer-bind
ChitinaseA_N
Motif
Other DBs
NCBI-GeneID:
102186933
NCBI-ProteinID:
XP_005680218
UniProt:
A0A452EVJ3
LinkDB
All DBs
Position
5:complement(39282636..39689003)
Genome browser
AA seq
1018 aa
AA seq
DB search
MKMWLLFSLLVIISFKTCLSEFTWHRRYGHGVSEEDKGFGPIFEEQPINTIYPEESPEGK
VSLNCRARASPFPVYKWRMNNGDIDLTSDRYSMVGGNLVINNPDKQKDAGIYYCLASNNY
GMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVF
ITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPLPERTTKPY
PADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNI
QLEDEGIYECEAENNRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIP
TIRWLKNGYSYHRGELRLYDVTFENAGMYQCIAENTHGAIYANAELKILALAPTFEMNPM
KKKILAAKGGRVIIECKPKAAPKPKFLWSKGTERLVNSSRILIWEDGSLEINNITRSDGG
VYTCFVENNKGKANSTGTLVITDPTRIILAPINADITVGENATMQCAASFDPALDLTFVW
SFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVV
RGPPGPPGGLRIEDVRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE
GNMEAARAVDLIPWMEYEFRVVATNTLGMGEPSIPSNKIKTDGAAPNVAPSDVGGGGGSN
RELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTNPDTGRYVHKDETMRPSTAF
QVKVKAFNNKGDGPYSLTAVIHSAQDAPSEAPTAVGVKVLSSSEISVHWEHVVEKIVESY
QIRYWASHDKEAAAHRVQVASQEYSARLENLLPDTQYFVEVRACNSAGCGPPSDMIETFT
KKAPPSQPPRIISSIRSGSRYIITWDHVVALSNESTVTGYKVLYRPDGQHDGKLYSTHKH
SIEVPIPRDGEYVVEVRAHSDGGDGVVSQVKISGASILSPCLLGFLLPALGILVYLEF
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgtggttgctgttcagtctcctagtaataatatcttttaaaacttgtctatca
gagtttacatggcacagaaggtatggtcatggagtttctgaggaagacaaaggatttgga
ccaatttttgaagaacaaccaatcaataccatttatccagaggagtcaccggaaggaaaa
gtttcactaaactgtagggcacgggccagccctttcccagtttacaaatggagaatgaat
aatggggatattgatctgacaagtgatcggtacagtatggtaggaggaaaccttgttatc
aacaatccagacaaacagaaagatgctggaatatattactgtctagcatcaaataactat
gggatggtcagaagcactgaagcaaccctgagttttggatatcttgatcctttcccaccc
gaggaacgtcctgaggtcagagtgaaagaagggaaaggaatggtgctgctctgtgaccct
ccataccatttcccagatgatcttagctaccgctggcttctaaatgaatttcccgtattt
atcacaatggataaacgaagatttgtgtctcagacaaatggcaatctctacattgctaat
gttgaggcatctgacaaaggcaactattcttgctttgtatccagtccctcaattacaaag
agtgtgttcagcaaatttatcccgctcattccactacctgaacgaacaacaaaaccatat
cctgctgatattgtagttcagttcaaggatgtatatgcactgatgggccaaaacgtgact
ttagagtgttttgcacttggcaatcctgttcctgatatccgatggcgaaaagtcctagaa
ccgatgccaagcacagctgagatcagcacctctggagctgtcctcaagatcttcaatatt
cagctggaagatgaaggcatatacgaatgtgaggctgagaacaatagaggaaaggataaa
caccaggcaagaatttatgttcaagcgtttcctgagtgggtggaacacatcaatgacaca
gaggtggatataggcagtgatctctactggccttgtgtggccacggggaagcccattcct
accatccgatggctgaagaatggatattcgtatcatagaggggaattgaggctgtatgac
gtgacctttgaaaatgctggcatgtaccagtgcatagctgaaaacacacatggagcaatt
tatgcaaatgccgagttgaagatcttggctttggctccaacttttgaaatgaatcctatg
aagaaaaagatcctggctgctaaaggaggacgggttataattgaatgcaaacctaaagct
gcacccaaaccgaaatttttatggagtaaaggcacagagcggcttgtcaacagcagcaga
atactcatttgggaagatggcagcttggaaatcaataacattacaaggagtgatggaggt
gtctatacatgctttgtggaaaataataaagggaaagctaatagcactgggactcttgtc
atcacagatcccacacgaattatattggccccgattaacgctgatatcactgttggagaa
aatgccaccatgcagtgtgccgcttcctttgatcctgccctggatctgacatttgtttgg
tccttcaatggttatgtgatcgactttaacaaagagaacattcattaccagcggaatttt
atgctggattccaatggggagctgctcatccgaaatgcccagttgaaacacgctgggagg
tacacgtgcactgctcagacaattgtagacaattcttcagcctctgctgaccttgttgtg
cgaggccctccaggccctccaggtggtctgcgaatagaagatgttagagccacttctgtg
gcacttacttggagccgtggttcagacaatcatagtcctatatctaagtacactatccag
acgaagactattctttcagatgattggaaagatgcgaagacagatcccccaattattgaa
ggaaacatggaggcagcaagagcagtggatttaatcccatggatggaatatgaatttcgt
gtggtagcaacaaatacattgggtatgggagagcccagtataccatcaaacaaaattaaa
acagatggcgctgcacctaatgtggctccttcagatgtaggaggtgggggtggaagcaac
agagaactgaccataacgtgggcgccattgtcaagagaataccactatggcaacaatttt
ggttacatagtggcatttaagccatttgatggggaagaatggaaaaaagtgacagttact
aatccagatactggccgctatgtccataaagatgagaccatgcgtccttccactgcattt
caagtcaaagtcaaagctttcaacaacaaaggagatggaccctacagtctcacagctgtc
atccactccgcacaagacgctcccagtgaagccccaacagcagtaggagtaaaagtctta
tcatcttctgagatatctgttcattgggagcatgttgtagaaaaaatagtagaaagctat
cagattcggtactgggcttcccatgacaaagaagcagctgcacacagagttcaagttgct
agccaagaatactcggccaggctggagaaccttctgcctgacacccagtattttgtggaa
gtcagggcgtgcaatagtgcagggtgtggacctcccagtgatatgattgagaccttcacc
aagaaagcacctccaagccagcctccgcggatcatcagttccataaggtctggttcacgc
tacataatcacctgggatcatgtggttgcactgtcgaatgaatctacagtgacgggatat
aaggtactctatagacctgatggccagcatgatggcaagctgtattcaactcataaacac
tccatagaagtcccaatccccagggatggagaatatgttgtagaggttcgtgcacacagt
gatggaggagatggagtggtgtctcaagtcaaaatttcaggtgcatccatcttatcacca
tgtcttctcggcttcctgctgcctgcccttggcatccttgtctacttggaattctga
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