Capra hircus (goat): 102187132
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Entry
102187132 CDS
T02910
Symbol
RP1L1
Name
(RefSeq) retinitis pigmentosa 1-like 1 protein
KO
K19538
retinitis pigmentosa 1
Organism
chx
Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
chx03037
]
102187132 (RP1L1)
04812 Cytoskeleton proteins [BR:
chx04812
]
102187132 (RP1L1)
Cilium and associated proteins [BR:
chx03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
102187132 (RP1L1)
Cytoskeleton proteins [BR:
chx04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
102187132 (RP1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCX
DCX2_DCDC1
Motif
Other DBs
NCBI-GeneID:
102187132
NCBI-ProteinID:
XP_017908245
LinkDB
All DBs
Position
8:8496728..8541966
Genome browser
AA seq
1941 aa
AA seq
DB search
MNSTPRDAPAPGHREDLLPSVARTPSVTQVTPAKKITFLKRGDPRFAGVRLAVHQRAFRS
FGALMDELSQRVPLSFGVRSVTTPRGLHGLSTLEQLQDGGCYLCSDKKPPKTPGGLGQPQ
GKSPSAQQLREFEAPGTASTCKGLKASRRITLVKNGDPRLQQTVVLSHRNTRNLTAFLSK
ASDLLRFPVKHVYTTSGKRVDSLKALLRSPSVLVCAGLEPFRPLVMEDVRKKGSELSSGQ
TSRNKSGSWGPKAKQSVIHTRSRLENRPRQLSLMSERSGHSDLSVCPHRACMCPAPDRHP
LNTPARLGPLVAGEDIEKNVSMNEDGSLSVEMKVRFHLLGEEPLLWSRRLGRASTLTATS
TEGPDDGEADIHGCVWKGLSRDPSEPGAQGLGPCEAGGVGAFDQGQRQQGSRYEIWMNPL
YTSQGEWSASQWRSGLTQNSHSRAPRSQRVTSRKRGSKDRASPASSGTPPGGSEPSSSCC
SGSLEDAVASCGPHLASGAGEGRGNGTALGCRDHDGCLKPRTRGLTDALPDSCASARSHE
ECGERDKLSQGRPSKTPRGATQQGVPGSPTVSPSSIGNKDPQAEEFGQGAGHPQARNRSG
VRPASTRGPAASGDDAGGSSPPSAYASATSRSRKQESRASTLTSASISVRSRGAQRARPR
EHHSPKDINCPLDSPVSQPMPGPSSGDRAHPHGPQPSLSESPQGTWNWASWDPGPPFSAS
LYSQDTRGLSSIPITPGSNSDCVSNFHLPDSPSAETEGGPEFRPCSPAPTPSNTSGPFSA
PADGLGEKTGGDKSQPCWPLVLPARWPEGGRLGTHWGSCCSHLGTSLAHGSSCGTIQTMP
APQPQGSQGLSSKACWVCSRYCPTPPRTRPSGKRHPSGSRREGDRSADGEPSGEQVGEEK
LDAWPPRPPGSQGAASGRAVRAVRRGSPRSGPQLGRLVQGKLSGRGGGLEEPEGGGGELL
GALPRASPEAVVRAWLSNIPEEPMKHELEDKGEDVAGHGLGGLQEDPVDKHSPDGLERSV
WARQVPLEQAASEEAEPDKAFAAASSAGPKSGEGLPCHGVSETPTEAGTGKGVAVDGGRG
QRVLPSRVSTSLEIMKALMGSRPGRPSSLPEVSHSAGRRLSRSAQTLITCLARLHFFDDE
DLGSPASKVRFIDSPRYQELLSTFQALWPGSGLRNGELESDLRELGWRQALPALGPHIAT
EDFRPTSSSGVDVGSGSGGSGEGSGPCTVDCSLASEKMELPLSISCQGPASRTSGNREVP
GNQQLSSYEAEGAASEDRAEKSGREQTLGGDPDQGDRNTMRGEGVQSEEIEEEKERAELQ
AEGVRGFPEEEGIMELELSGPGSQDGAGVWESQSLHEEEPGDPTAVDTQSSSGRRGSPPE
PPRSLSERCLDASGSQSGPKAEPPLEKLLGAAETGCGQILDKLTQGAGERTTCKGRRGSL
ISDPVWVSKLLKKMEKAFMDHLAAATAELCTRWGLQGDHLLDQMVAELQRDVGQRLQGSV
EKELLKVQSWAGGVGTGPPREALRWEASLQTEQRRRRLQALRNLSPFSEQTRGREAPSFS
LEDLPIFRGALGTQLAVEAKGEEFCPCEACVRKKMVPASPVDAVGSASAPIRKAFDLQHI
LQNKKAGCADGETVEAGPAVEREVEPLHRDPSGTGTARGTDGDPELGSGQGPGAEEGDQT
LGRHEEPWGREEEAGAQEKEGETEPCAGSDPWEGLGSGEQGMGGEEGGLEAGCGAEDTGE
PHGLGGGGPGPGGRDAGAETTEARGAAREEQSETGGGHGGDEEGGPQKGSEDEPWDEYMR
STEDQATDTPDPERKVTGSPSHTPAPSSVIPKRLAPKPFLGPRASAPQQEPRKMPPEDGS
RYCLTDFMWLSIRCVDVSFCSIPADDVSAFGTIKAHTFSPSPPFQEASPLSLRNLRNPPK
MLQRQQFWSPLRKDLMSLLSP
NT seq
5826 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcactccaagggatgccccggcccccggccaccgcgaggacctcctgccctct
gtggcccggaccccctctgtcacccaggtcacgccggccaagaagataaccttcctcaag
cgaggggatccccggtttgctggggtccgcctggctgttcaccagcgcgccttcaggagc
tttggggccctgatggacgagctctctcagcgggtaccactctcttttggggtgcgctcg
gtcaccacaccccggggtctgcatggcctcagcaccctggagcagctgcaggatggtggc
tgctatctctgctccgataagaagccccccaagacccccggcgggctgggccagccccag
gggaaaagcccttccgctcagcagttgagggaatttgaagcaccgggaacagcctctacc
tgcaaaggtctcaaagcctcgaggaggatcacactggttaagaatggggaccctcgactc
cagcagacagtggtgctcagccacagaaacaccaggaacctgacggcctttctcagcaaa
gcgtcggacctactgcgctttcctgtgaagcatgtatacacgaccagtgggaaaagggtg
gactctctgaaggctctgctgcgaagcccctccgtgctggtgtgcgccggtctcgagccc
ttcagaccgctggtgatggaagatgtcagaaaaaaaggaagtgaactttcatctgggcag
acttcaaggaacaaaagtgggagctgggggcccaaggccaaacagagcgtgatccataca
cggtccaggctggagaacaggccgcggcagctctccttgatgtcggagaggtcggggcac
agcgacctctcggtgtgcccgcatcgtgcctgcatgtgccctgcccccgacaggcaccct
ctgaacactcctgcccggctcggccccttggtggcaggtgaagacatcgagaagaacgtg
agcatgaatgaggatggcagtctgtctgtagagatgaaagtccgcttccacctgctgggg
gaggagccgcttctgtggtccaggaggctcgggagggccagcaccctcacggcgaccagc
acggagggccccgacgatggggaggcggatatccatggctgtgtgtggaagggcctctct
agggacccatcagagcctggggcacagggactggggccctgcgaggcgggaggggtggga
gcctttgaccaaggccagcggcagcaggggtctagatacgagatctggatgaaccccctg
tacacctcccagggagagtggtcggcctctcagtggaggtctgggctgacccagaactcc
cactccagggccccccggagccaaagggtcaccagtaggaaaagagggagcaaggacagg
gccagccctgcctccagcggcacaccccctggaggctctgagccaagctcctcctgctgc
tctgggtccctggaggatgctgtggccagctgcggcccacatctggcctccggggctggg
gaaggcagaggcaatgggacagcgctgggctgcagggaccatgatggctgcctgaaaccc
aggacccgcggcctgacagatgctcttcctgactcctgcgcgagcgccaggtctcatgag
gagtgtggcgaaagggacaagctgtcccagggccgccccagcaagactccccggggagcc
acccagcagggagttccgggttcccccactgtgagcccctcgtctatagggaacaaggac
ccacaggcagaggagtttggacagggagcagggcacccccaggccagaaataggtctggg
gtgaggccagcctcgactcggggcccggctgcttctggggatgatgcgggaggctccagc
cctccttctgcctatgcctcagccacgagcaggagcagaaagcaggagagcagagccagc
accctgacctcagccagcatttctgtccgcagtcgaggcgcccagagggcccgccccagg
gagcaccacagccccaaggacatcaactgcccactcgactcgcctgtgtcccagccaatg
ccggggccatccagcggagacagggcccatccacacggcccccaacccagcctttctgaa
agcccacagggcacctggaactgggcctcctgggacccagggccacccttctcggcctct
ctttattcccaggacacacgcgggctaagcagcattcccattacccctgggagcaattct
gactgtgtttccaatttccacctccccgattctccctctgctgagaccgaagggggccct
gagttcaggccgtgctcaccggctcccacaccttcaaacacatctggccctttcagtgcc
ccagctgatggcctgggtgaaaagactgggggtgacaaatcccagccttgctggcccttg
gtcctgccagccaggtggcctgagggagggaggctgggaacacactggggcagctgctgt
tcacacctgggcacatccctggctcacgggtcctcctgtgggacaatacagacgatgcca
gccccacagccgcagggcagccaggggctctcctccaaggcctgctgggtgtgcagcagg
tactgtcccacaccccccaggacacggccctcgggcaagaggcacccttcaggcagccgc
agggagggtgaccgcagcgctgatggggagcctagtggggagcaggtaggagaggaaaag
ctggatgcgtggcctccgcggccccctggctctcagggagcagcctcagggagagcagtc
agagctgtgagaaggggcagccctcgcagtggtccccagctcgggaggctggtccagggg
aagctctcaggcagaggaggaggcctggaggagccagagggaggtggcggtgagctgctg
ggagctctgccccgagcctccccagaagccgtggtccgtgcgtggctgagcaacatcccg
gaggagcccatgaaacacgagctggaggacaagggtgaggacgtggccgggcatggcctg
ggaggcctccaagaggaccctgtggacaaacactccccagatggcctggaaagatcagtc
tgggccagacaagtgcctctggaacaggcggccagtgaggaagcagaaccagataaagcc
tttgcagcggctagcagtgccggtcccaagtcaggagagggtctgccttgccatggagtg
tcagaaacccctacagaggctggaacaggcaaaggagtggctgtggacggtgggaggggc
cagcgcgtgcttcccagcagggtctccacctccttagagatcatgaaggcgctgatgggg
tcccggccgggccggcccagcagtctgcctgaagtgtcccactcagcgggcaggaggctc
agccgctcagcccagaccctcatcacctgtcttgccaggctccacttctttgatgacgaa
gaccttgggtctcccgccagcaaagtgaggttcatagactctcctcggtaccaggagctc
ctaagtaccttccaggccctgtggccagggagtggcctcaggaacggtgagctggaatca
gacctccgggagctcggctggcgccaggccctgccggccctcgggccccacattgcaacc
gaggacttcaggcccacatcctcctcgggggtggatgtcggcagtggttccggaggctcg
ggggagggcagcggaccctgcaccgtggactgcagcctggcgtccgagaagatggagctg
cccttaagcatctcctgccaggggcctgcttccagaacctcggggaaccgagaagttcca
ggaaaccaacagctgagtagttatgaggctgagggtgctgccagtgaggacagggcagaa
aaaagcggcagggagcagacgctggggggcgacccggaccaaggagatagaaacacaatg
cggggagagggggtacaatcggaggaaatagaagaagaaaaagaaagagcagagctgcaa
gcagagggtgtcagagggtttccggaagaggaaggaatcatggaactagaactgtcaggg
ccaggctctcaggatggggctggtgtctgggagagtcagagcctgcatgaagaggagcca
ggagaccccactgctgttgacacgcagagctcttcagggaggagagggagcccgccagag
ccccccaggagcctcagcgagaggtgcctggatgccagtgggagtcaaagtggccccaaa
gctgagccccctttagagaagttgctcggagcagctgagactggctgtgggcaaatcctg
gacaagctcacccagggggctggtgagaggaccacttgcaagggccgcagggggtctctg
atctcggaccctgtgtgggtgtccaagttgttgaagaagatggagaaggccttcatggac
cacctcgcggctgccacagccgagctctgcacccgctggggcctgcagggcgaccacctg
ctggaccagatggtggccgagctgcagcgggatgtgggccagcggctccagggcagtgtg
gagaaggagcttctcaaggtccagagctgggcagggggcgtgggcacggggccgcccagg
gaagccctccgctgggaggcgtccctgcagacggagcagcgcaggcggcgcctccaggcc
ctgcgcaacctctcgcccttctccgagcagacgcgaggccgggaggcgccctccttctcc
ctggaggacctgccaatcttcagaggagccctggggacccaacttgcagtagaggccaag
ggggaggagttctgtccctgcgaggcctgcgtgaggaagaaaatggttcccgcgtcccca
gtggatgctgtggggtcagccagcgcgcccatcaggaaggccttcgacctgcaacacatt
ctgcagaataagaaagcagggtgtgctgacggagagacagtggaggcgggccccgctgtg
gagagggaggtggagccccttcacagggacccctcggggacaggcactgcccggggaact
gatggagaccctgagctgggatcaggccagggccccggagcagaggagggggaccagacc
ctcggcaggcatgaagagccctgggggagagaggaggaggcgggtgctcaggagaaagag
ggggaaacagagccctgtgcaggcagcgacccctgggaggggctagggagcggggagcag
ggcatgggtggtgaggaaggaggcctggaggcaggctgtggggctgaggacacgggggag
cctcatggcctggggggaggcggcccgggtccaggaggacgagatgctggtgctgaaaca
acagaggcccgaggggctgcaagggaggagcagtcagagacaggaggaggacatggaggt
gacgaagaagggggccctcagaaaggctccgaagatgagccgtgggacgaatacatgagg
agcactgaagaccaggccacggacacccctgatccagagagaaaagtcacagggagccct
tcccacacgccggcacctagctctgtgatcccaaagcgcttggctcccaagcccttcctg
ggaccccgggcttctgccccccagcaggagccgaggaaaatgccgcccgaggacgggtct
aggtactgcctcacagatttcatgtggctgagcatccgctgcgtggatgtgagtttctgc
tctattccagccgatgacgtcagcgcgtttgggaccatcaaggctcacaccttcagcccc
agccctccgttccaggaggcttccccgttaagtcttcggaatctcaggaatccccctaaa
atgctccagaggcagcaattctggagtccactcaggaaggacctcatgtccttgttgtct
ccctaa
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