Capra hircus (goat): 102187563
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Entry
102187563 CDS
T02910
Symbol
DDX50
Name
(RefSeq) ATP-dependent RNA helicase DDX50 isoform X1
KO
K13183
ATP-dependent RNA helicase DDX50 [EC:
5.6.2.7
]
Organism
chx
Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
chx03041
]
102187563 (DDX50)
Enzymes [BR:
chx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102187563 (DDX50)
Spliceosome [BR:
chx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
102187563 (DDX50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
ERCC3_RAD25_C
AAA_30
Motif
Other DBs
NCBI-GeneID:
102187563
NCBI-ProteinID:
XP_005699180
EnsemblRapid:
ENSCHIG00000000285
UniProt:
A0A452DKN8
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Position
28:complement(20427067..20459310)
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AA seq
738 aa
AA seq
DB search
MMPGKLLWGDIMELEAPLEETESQRKERQKSDRRKSRHHNDSDEKSETRENGVTDDLDAP
KPKKAKMKEKLNGDTEEGCDRLSDEFSKSHKPRRKDLSNGDIDEHEKRSKRVSSLNSSTH
KSSDNKLEETLTREQREGAFSNFPISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIA
QARTGTGKTFSFAIPLIERLQRNQETVKKSRSPKVLVLAPTRELANQVAKDFKDITRKLS
VACFYGGTSYQSQINHIRNGIDILVGTPGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLG
FAEQVEDILHESYKTDSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAA
TTVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQNAQCLH
GDIAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRT
GRAGRTGICICFYQPRERGQLRYVEQKAGITFKRVGVPSTMDLVKSKSMDAIRSLASVSY
AAVDFFRPSAQRLIEEKGAVDALAAALAHISGASSFEPRSLITSDKGFVTMTLESPEEIQ
DVSCAWKELNRKLSSNAVSQITRMCLLKGNMGVCFDVPTTESERLQAEWRDSDWILSVPA
KLPEIEEYYDGNTSSNSRQRSGWSGGRSGRSGRSGGRSGGRSGRPSRQGSRSGSRQDGRR
RSGNRNRSRNGGHKRSFD
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgatgcctgggaaactcctctggggggacattatggagctggaggcacccttggaggag
accgagagccagaggaaggagaggcaaaagagtgatagaaggaagtcaaggcaccataat
gactcagatgagaaatcagaaacaagagaaaatggtgttacagatgacttggatgctccc
aaacccaaaaaagctaaaatgaaagagaagctaaatggtgacaccgaggaaggatgtgat
agactttcagatgaattttctaaatctcataagccaagaagaaaagatctatcaaatgga
gatattgatgaacatgaaaaaagatcaaagcgagtgtcatctttaaatagttctactcat
aaatcaagtgataataaactagaagagaccctaacacgtgaacagagagaaggagccttc
tccaatttccctatttctgaagagactataaagcttctgaaaggtcgaggggtaacatat
ctctttcctattcaagttaagacttttggtcctgtatatgaaggaaaagatttaattgct
caagcgcggacaggaacaggaaagacattctcttttgccatccccttgattgaaagactc
caaagaaatcaagagacagttaaaaaaagccgctcaccaaaggtacttgttttggctcca
acaagggaactggcaaaccaagtagccaaagacttcaaagatataactaggaaactcagc
gtggcatgtttttatggtggaacatcatatcaaagccaaattaatcatattcgaaatggt
attgacatcttggttgggacccctggtcgtatcaaagaccatctgcagagcggccggtta
gatctttctaaactacgccacgttgtgcttgatgaagtggatcaaatgttagatttagga
tttgctgaacaagttgaagacattctccatgagtcctacaaaactgattctgaagacaat
cctcagactttacttttttctgcaacttgcccacagtgggtatacaaagttgcaaaaaaa
tacatgaaatccagatatgaacaggttgaccttgttgggaaaatgactcaaaaggctgca
actactgtggaacatttggccatccagtgccactggtctcagaggccagcagttattgga
gatgtccttcaggtctacagtgggtctgaagggagggctattatcttctgtgagaccaaa
aagaatgtaactgaaatggccatgaatccacacataaaacagaatgcccagtgtttacat
ggggacatcgctcagtcacaaagagaaattacactgaaaggcttcagagagggtagtttt
aaagttttggtggcaaccaatgtggctgcccgtggtttggacattcctgaggttgacctg
gtgattcagagttcacctccacaggatgttgagtcctatattcatcgctctggacgcaca
ggtcgagctggccggacagggatctgcatatgtttttatcaaccgagagaaagaggtcaa
ttacgatatgtggaacaaaaagcaggaattacttttaaacgtgtaggtgttccttctaca
atggatttagttaaatctaaaagcatggatgccatcaggtctttggcttctgtttcttat
gctgctgttgattttttccgaccatcagctcagagactgatagaagagaaaggggcagtg
gatgcactggccgcagcattagcccacatttctggcgcatcaagttttgaaccacgatct
ttgatcacctccgataaggggtttgtgaccatgactctggaaagcccagaagaaatacag
gatgtcagctgtgcttggaaagaacttaacagaaagctgagtagtaatgctgtgtcccaa
attaccagaatgtgcctcctgaagggaaatatgggtgtttgctttgatgttcccacaact
gaatcagaaaggttacaggcagagtggcgtgattcagactggatactctcagtgccagcc
aagttgcctgaaattgaagaatattatgatggaaacacatcttctaattccagacagagg
agtggttggtcaggtggtcggtcgggccggtcgggccggtcaggcggtcgatccggtggc
cggtcaggtagaccgagtcggcaggggagtcggtcaggaagtcgacaagatggtagaaga
cgaagtgggaatagaaatcgatcaagaaatgggggccacaagcggagttttgactga
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