Capra hircus (goat): 102187649
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Entry
102187649 CDS
T02910
Symbol
ZSWIM8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
chx
Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
chx04121
]
102187649 (ZSWIM8)
Ubiquitin system [BR:
chx04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
102187649 (ZSWIM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
Motif
Other DBs
NCBI-GeneID:
102187649
NCBI-ProteinID:
XP_017897734
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All DBs
Position
28:complement(15939602..15953940)
Genome browser
AA seq
1841 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTGGGGG
GGSGGTRMRDGLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDI
RLYSCLANGSADEFQRGDQLFRMRAVKDPLQIGFHLSATVVPPQMVPPKGAYNVAVMFDR
CRVTSCSCTCGAGAKWCTHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLI
SELPQQILPTAQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLTDNIKK
TLHKFCGPSPVVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGVWNLLSIVREMFKR
RDSNAAPLLEILTDQCLTYEQITGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMC
DEMVTLWRLAVLDPALSPQRRRELCAQLRQWQLKVIENVKRGQHKKTLERLFPGFRPAVE
ACYFNWEEAYPLPGVTYSATDRKLALCWARALPPRPGASRAGGLEESRERPRPLPAEPAV
RPKEPGAKRKGLGEGVPTSQRGPRRLSAEGGDKALHKMGPGGGKAKTLGGAGCGGKGSVG
SGSKRRLSSEDSSLEPDLAEMSLDDSSLALGAEASTFGGFPESPPPCPIPGGSRGPSTFL
PEPPDTYEEDGGVYFSEGPEPPTASAGPPGLLPRELCTRDDLPSTDESGNGLPKTKEAAP
VVGEEDDDYQAYYLNAQDGAGGEEEKAEGGAGEEHDLFAGLKPLEQESRMEILFACAEAL
HAHGYSSEASRLTVELAQDLLANPPDLKVEPPPAKGKKNKVSTSRQTWVATNTLTKAAFL
LTVLSERPEHHNLAFRVGMFALELQRPPASTKALEVKLAYQESEVATLLKKIPLGPSEMS
TVRCRAEELREGTLCDYRPVLPLMLASFIFDVLCAPVVSPTGSRPPSRNWNNEMPGDEEL
GFEAAVAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQARLKKILDKLLDRE
SQTHKPQTLSSFYSSSRPATASQRSPSKHGGPSAPGALQPLTSGSAGPAQPGSVAGAGPG
PTEGFTEKNVPESSPHSPCEGLPPEAALTPRPEGKVPSRLALGSRGGYNGRGWGSPGRPK
KKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWAPTSWGRGQDSDSISSSSSDSLGSSSS
SGSRRASASGGARAKTVEVGRYKGRRPESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGN
SSTSIFTHPSSSGGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQA
MEIGSAALTILVECWDGHLTPPEVASLADRASRARDSNMVRAAAELALSCLPHAHALNPN
EIQRALVQCKEQDNLMLEKACMAVEEAAKGGGVYPEVLFEVAHQWFWLYEQTAGGSSTAR
EGATSCSASGIRAAGEAGRGLPEGRGGPGTEPVTVAAAAVTAATVVPVISVGSSLYPGPG
LGHGHSPGLHPYTALQPHLPCSPQYLTHPAHPAHPMPHMPRPAVFPVASSAYPQGVHPAF
LGAQYPYSVTPPSLAATAVSFPVPSMAPITVHPYHTEPGLPLPTSVACELWGQGTVSSVH
PASTFPAIQGASLPALTTQPSPLVSGGFPPPEEETHSQPVNPHSLHHLHAAYRVGMLALE
MLGRRAHNDHPNNFSRSPPYTDDVKWLLGLAAKLGVNYVHQFCVGAAKGVLSPFVLQEIV
METLQRLSPAHAHNHLRAPAFHQLVQRCQQAYMQYIHHRLIHLTPADYDDFVNAIRSARS
AFCLTPMGMMQFNDILQNLKRSKQTKELWQRVSLEMTTFSP
NT seq
5526 nt
NT seq
+upstream
nt +downstream
nt
atggagctgatgttcgccgagtgggaggatggagagcgcttctccttcgaggattcggac
cgctttgaggaggattcgctctgttccttcatctccgaggctgagagcctctgccagaac
tggcggggatggcgcaaacagtcagcggggcccaattcccccactggcggcggtggcgga
ggtggcagtggcggtaccagaatgcgagatggactggtgatcccactggtggagctgtca
gcaaagcaggtggcatttcatatcccatttgaagtggtggagaaagtttaccccccggtg
cctgagcagctacaactccgaattgctttttggagctttcctgagaatgaagaggatatt
cgactctattcctgcctggccaacggcagtgcggatgagttccagcgaggggatcagctg
ttccgcatgagggctgtgaaggaccctctgcagatagggttccacctgagtgctacagtg
gtgccgcctcagatggtcccccccaaaggagcctacaacgtggctgtgatgtttgaccgc
tgccgagtcacttcctgcagctgcacctgtggtgctggggccaaatggtgcacccacgtc
gtggccctctgcctcttccgcatccacaacgcttctgcagtctgcttgcgggcccccgtg
tcagagtccctgtctcggctgcagagggaccagctgcagaaatttgctcagtacctcatc
agtgagctcccacaacagatcctccccacagcccaacgtctcctggatgaactcctctcc
tcccagtcaacagccatcaatacagtgtgtggagccccggatcccacagcagggccctcc
gcctccgatcagagtacgtggtatttggatgaatcgacgctcaccgacaacatcaaaaag
acactgcacaagttctgtggcccctcccctgtggtgttcagtgacgtgaactccatgtat
ctgtcttccacggagcctccggccgccgctgaatgggcatgtctgctgcgccctctgagg
ggccgcgagccagagggcgtctggaacttgcttagcatcgtgcgggagatgttcaagcga
agggacagtaatgctgcccccttgttggaaatcctcactgaccagtgcctcacctatgag
cagataacaggctggtggtacagtgtgcgcacctcagcctctcacagcagtgccagtggg
cacacaggccggagcaatgggcaatctgaggtggcggcccatgcctgcgccagcatgtgt
gatgagatggtcaccttgtggagactggctgtgctggaccccgcgctcagcccccagcgc
cgccgggaactgtgtgcacagctgcgccagtggcagctgaaggtgattgagaatgtgaag
cggggacagcacaagaagaccctggagcggctcttccctggcttccggccggctgtggag
gcctgctacttcaactgggaagaggcctacccgctgcccggtgtcacctacagcgccacg
gaccgcaagctggccctgtgctgggcccgagccctgccccctcgaccgggcgcctcgcgt
gctgggggcctggaagaatcccgagagcggccccggcctcttcctgccgagccagctgtg
cggcccaaggagccaggggccaaacgcaagggattgggtgagggggtccccacgtcacag
cggggtccccgccgcctctcggcagaggggggagataaggcactgcataagatgggtcca
ggtgggggcaaagccaaaacactgggtggggctggctgtgggggcaagggctcagtgggc
agcgggagcaagcgacggctgagcagtgaggacagctccctggagccggatctggctgag
atgagcctggacgacagcagcctggccctgggtgcagaggccagcaccttcggcggattc
cctgagagcccgccaccctgccccatccctggtggctcgcgaggcccttctaccttcctt
cctgaacctccagatacttacgaagaagatggtggcgtgtacttctcagaagggcctgag
cctcccacagcctctgctggcccccctggcctgttgcccagggagctctgtacccgggac
gacctcccttccacagacgagagtggcaatggactccctaaaaccaaagaggcagcccct
gtggttggcgaggaggatgacgactaccaggcatactatctgaatgcccaggatggggct
gggggcgaggaagagaaggctgagggtggggctggggaggagcacgacctgttcgctgga
ctgaagccgctggagcaggagagccgcatggagatactgtttgcctgtgctgaggccttg
catgcgcatggctacagcagcgaggcctcccgcctcaccgtggaacttgcccaggacctg
ctagccaacccgcctgacctcaaggtagagccgccccctgccaagggcaagaagaataag
gtatctacaagccgtcagacctgggtggctacgaacacactgaccaaggcagctttcctg
ttgacagtgctaagtgagcgtccagagcaccacaacctggccttccgagtgggcatgttc
gccttggagctccagcggcccccagcttctaccaaggccttggaggtgaagctggcctat
caggagtctgaggtggccactctgctcaagaagatccctctgggtccaagtgagatgagc
accgtgcgctgccgggcagaggagcttcgtgaggggacgctctgtgattatcggccagtt
ttgcctctcatgttggccagtttcatctttgatgttctctgtgctccagtggtttctccc
acgggttcccgacccccaagtcgcaactggaacaacgagatgcccggggacgaggagctg
ggatttgaagcagcagtagctgccttgggcatgaagacaacagtgagtgaggcagagcac
ccgctgctgtgtgaaggcacacgccgggagaagggcgaccttgccctggccctgatgatc
acttacaaagacgaccaggccagactcaagaagatcttagacaaactcttggaccgagag
agccagacgcataaaccacagacactgagttcgttctattcatccagccgcccggccaca
gccagccagaggtctccttcaaagcatgggggcccatctgccccaggggccctgcagcct
ctgacctcaggctctgcagggcctgctcagccagggagtgtggcaggggctgggccaggc
cccactgagggcttcacagagaagaatgtgcctgagagttccccacattccccctgtgag
ggccttccacctgaagcagctctgaccccaaggccagaggggaaggttcccagccgcctg
gcacttggcagccgtggaggctacaacggacggggctggggctcaccagggcggcctaag
aagaagcacacaggcatggccagcattgacagcagtgcccctgaaacaacgtcggatagc
tccccaaccttaagcaggaggccgctgagagggggctgggcccctacgtcctggggtcga
ggccaagacagtgacagcatcagcagctcttcctcagactcccttggctcctcgtcctcc
agtggaagtcgccgggccagtgccagtggaggggcccgggcgaagactgttgaagttggc
aggtacaagggccgccgtcccgagagtcatgccccccatgtacccaatcagccatcagag
gcagctgcacacttctacttcgagctggcgaagacagtactgatcaaggcagggggcaac
agcagcacttccattttcacacacccatcttcctcagggggccaccagggtcctcaccgc
aacctgcacctttgcgcctttgagattgggctttatgcccttggcctgcacaactttgtt
tctcccaactggctctcacgtacttactcttcccacgtttcctggattacaggccaggca
atggagattgggagtgcagccctgactatactggtagaatgctgggatgggcacctgacg
ccccctgaggttgcgtccctggctgacagggcatcacgggcacgagactccaacatggtg
agggcagcggcggaactcgccctaagctgcctgcctcatgcccatgcgttgaaccccaat
gagatccagcgggccctggtgcagtgcaaggagcaggataacctgatgttggagaaggcc
tgcatggcagtggaagaggcggctaagggtgggggcgtataccccgaagtgttgtttgag
gttgctcaccagtggttctggctatatgagcaaacagcaggtggctcatccacagcccgt
gaaggggctacaagctgtagtgccagtgggatcagggcagctggggaggctgggcggggg
ctgcctgagggcagggggggcccagggactgagccggttacggtggcggcggcggcagtg
acagcagccacagtggtgccagtcatctcggtggggtccagtttatacccaggtccaggc
ctggggcacggtcattcccctggcctgcacccctacactgctctgcagccccacctgccc
tgcagccctcaatacctcacccacccagctcaccccgcccaccccatgcctcacatgccc
cggcctgccgtcttccctgtggccagctctgcatacccgcagggtgtgcatcctgcattc
ctaggggctcagtacccttactcggtgactcccccctcacttgctgccactgctgtgtct
ttccccgtcccttccatggcacccatcacagtacatccctaccacacagagccaggcctc
ccactgcccaccagtgtggcctgtgagttgtggggacagggaacagtgagcagtgtccat
ccagcttccacgtttccagccatccagggtgcctcactgcctgccctgaccacgcagccc
agccctctggtgagcgggggttttccaccacccgaggaggagacccacagccagcctgtc
aacccacacagcctacatcacctgcacgctgcctaccgagtcggaatgctggcactggag
atgctgggtcgccgggcacacaacgatcaccccaacaacttctctcgctcccctccctac
actgatgatgtcaaatggttgctggggctggcggcaaagctgggagtgaactacgtgcac
cagttctgtgtgggggcagccaagggggtgctgagcccgtttgtgctgcaggagatcgtc
atggagacgctgcagcggctgagccctgctcacgcccacaaccacctgcgtgccccggcc
ttccaccaactggtgcagcgctgccagcaggcatacatgcagtacatccaccaccgcctg
attcacctgacccccgccgactacgacgactttgtgaatgccatccgcagcgctcgcagc
gccttctgcctgacccccatgggtatgatgcagttcaacgacatcctgcagaacctcaag
cgcagcaagcagaccaaggagctgtggcagcgggtctcactcgagatgaccaccttctcc
ccctga
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integrated database retrieval system
