Capra hircus (goat): 102187736
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Entry
102187736 CDS
T02910
Symbol
HDAC4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
chx
Capra hircus (goat)
Pathway
chx04371
Apelin signaling pathway
chx04613
Neutrophil extracellular trap formation
chx05034
Alcoholism
chx05203
Viral carcinogenesis
chx05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
102187736 (HDAC4)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
102187736 (HDAC4)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
102187736 (HDAC4)
05203 Viral carcinogenesis
102187736 (HDAC4)
09165 Substance dependence
05034 Alcoholism
102187736 (HDAC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
chx03036
]
102187736 (HDAC4)
Enzymes [BR:
chx01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
102187736 (HDAC4)
Chromosome and associated proteins [BR:
chx03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
102187736 (HDAC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Oxidored_nitro
Motif
Other DBs
NCBI-GeneID:
102187736
NCBI-ProteinID:
XP_017895619
EnsemblRapid:
ENSCHIG00000018437
UniProt:
A0A452F5N8
LinkDB
All DBs
Position
3:2202835..2496164
Genome browser
AA seq
1089 aa
AA seq
DB search
MSSQSHPDGLSGRDQPVELLNPARVNHMPSTVDVASALPLPVAPPGVPMDLRLDHQFPLP
VAEPGLREQQLQQELLALKQKQQLQRQILIAEFQRQHEQLSRQHEAQLHEHIKQQQELLA
MKHQQELLEHQRKLERHRQEQELEKQHREQKLQQLKNKEKGKESAVASTEVKMKLQEFVL
NKKKALAHRNLNHCMSSDPRYWYGKTQHSSLDQSSPPQSGASASYNHPVLGMYDAKDDFP
LRKTASEPNLKLRSRLKQKVAERRSSPLLRRKDGPVVTALKKRPLDVTDSACSSAPGSAP
SSPNNSSGNVSTENGIAPTVPSIPAETSLAHRLVAREGSVGPLPLYTSPSLPNITLGLPA
TGPSTGAAGQQEAERLALPALQQRVSLFPGAHLAPYLGTAPLERDTGAAPGSLLQHVVLL
EQPPAQTPLVTDRYLAGLGALPLHAQPLVGAERVAPSVHKLRQHRPLGRTQSAPLPQSAQ
ALQHLVIQQQHQQFLEKHKQHFQQPQLHLNKMIPKPSEPARQPESHPEETEEELREHQAL
LEEPFLDRLPGQKEAHALAGVQVKQEPIESDDEETEPAREADPGQRLPTEQELLFRQQAL
LLEQQRIHQLRNYQASMEAAGIPVSFGGHRPLSRAQSSPASATFPMSVQEPPAKPRFTTG
LVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRSKCECIRGRKATLEELQTVH
SETHALLYGTNPLNRQKLDSKKLLGSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAARLAV
GCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLSVSKTL
VVDWDVHHGNGTQQAFYSDPRVLYISLHRYDDGNFFPGSGAPDEVGTGAGVGFNVNMAFT
GGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGY
LTKQLMGLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRPNANAVR
SMEKVIEIHSQYWRSLQRLASTAGYSLVEAQKCENEEAETVTAMASLSVAVKAPEKRPDE
EPMEEEPPL
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgcaaagccatccagatggactttctggccgagaccagccagtggagctgctc
aaccctgcccgtgtgaaccacatgcccagcaccgtggacgtggcctcggccctgcctctg
ccggtggcccccccgggggtgcccatggacctgcgcctggaccaccagttcccgctgccc
gtggcggagccgggcctccgcgagcagcagctgcagcaggagctcctggcgctcaagcag
aagcagcagctgcagagacagatcctcatcgccgagttccagcggcagcacgagcagctg
tcgcggcagcacgaggcccagctgcacgagcacatcaagcaacagcaggagctgctggcc
atgaagcaccagcaggagctgctcgagcaccagcggaagctggagcggcatcggcaggag
caggagctggagaagcagcaccgggagcagaagctgcagcagctgaagaacaaggagaag
ggcaaagagagcgccgtggccagcacggaagtgaagatgaagctgcaggagtttgtcctc
aataagaagaaggccctggctcatcggaacctgaaccactgcatgtccagcgaccctcgc
tactggtacgggaagacgcagcacagctcactggaccagagctccccgccccagagcggg
gcgtcggcctcctacaaccacccggtcctgggcatgtacgacgccaaagacgacttcccc
ctcagaaagacagcttctgaacccaacctgaaattgcgctccaggctaaagcagaaagtg
gctgagagacggagcagccccctgctgcgcaggaaagatgggccagtggtcacggctctg
aaaaagcgccccttggatgtcacagactcggcgtgcagcagtgccccaggctccgcgccc
agctcgcccaacaacagctccgggaacgtgagcaccgagaacgggatcgcgcccaccgtc
cccagcatcccggccgagaccagcctggcgcacagactcgtggcgcgagagggctcggtg
ggcccgctgcccctctacacctcaccatccctgcccaacatcacgctggggctgcccgcc
accggcccctccacgggggcagccggccagcaggaggccgagagactggccctccccgcc
ctgcagcagcgcgtctccctcttccccggcgcccacctcgccccctacctgggcacggcg
cccctggagcgtgacacaggggcggcccctggctccctgctgcagcacgtggtcctcctg
gagcagccgcctgcacagacgcccctcgtcacagaccgctatcttgcaggcctgggcgcg
ctgcccctgcacgcgcagcccctggtaggggctgagcgcgtggcaccctcggtgcacaag
ctgcggcagcaccgcccgctgggccgcacgcagtcggcgccgctgcctcagagcgcgcag
gcgctgcagcacctggtcatccagcagcagcaccagcagttcctggagaaacacaagcag
cacttccagcagccgcagctgcacctcaacaagatgatccccaaacccagcgagccagca
cggcagcccgagagccaccccgaggagacggaggaggagttgcgggagcaccaggcactc
ctggaggagcccttcctggaccggctcccggggcagaaggaggcccacgcgctggctggg
gtgcaggtgaagcaggagcccatcgagagtgatgacgaggagacggagcccgcacgggag
gcggaccccggccagcggctgcccacggagcaggagctgctcttcagacagcaagccctc
ctcctggagcagcagcggatccaccagctgaggaactaccaggcatccatggaggccgct
ggcatccccgtgtccttcggcgggcaccggcccctatcccgggcgcagtcctcccccgcg
tctgccaccttccctatgtccgtgcaggagcccccagccaagccgaggtttaccacaggc
ctcgtgtacgacacgctgatgctgaagcaccagtgcacctgcgggaacaccaacagccac
ccagagcacgccgggcgcatccagagcatctggtcgcggctgcaggagaccggcctgcga
agcaaatgtgagtgcatccgtggacggaaggccacgctggaggagctgcagacagtgcac
tcggagacgcacgccctgctctacggcacgaaccccctcaacaggcagaaactggacagt
aagaaacttctaggctcattaacgtccgtgttcgtcaggctgccctgcggtggtgtcggg
gtggacagtgataccatatggaatgaggtgcactcgtcgggggctgcccgcctggctgtg
ggctgtgtggtggagctggtcttcaaggtggccacaggggagctgaagaacggctttgct
gtggtccgccctccaggacaccacgcagaggagagcacgcccatggggttctgctacttc
aactccgtggccatcgctgccaagcttctccagcaaaggctgagcgtgagcaagaccctc
gtggtagactgggacgtgcaccacgggaacgggacccagcaggccttctacagcgacccc
cgcgtgctctacatctccctgcaccgctacgacgacggcaacttcttcccaggcagcggc
gcacccgacgaggtgggcacgggcgctggcgtgggcttcaacgtcaacatggctttcacc
ggcggcctggacccccccatgggagacgcagagtacctggcggccttcaggactgtggtc
atgccgatcgccagcgagtttgccccagatgtggtgctggtgtcctcgggcttcgatgct
gtggagggccaccccacgcccctcggaggctacaacctctccgccaaatgtttcgggtac
ctgacgaagcagctaatgggcctggccggtggccgggttgtcctggcgctagaggggggc
cacgatctcacagccatctgcgacgcctcggaagcctgcgtctctgctctgctggggaat
gagctcgatcctctcccagaaaaggtcttacagcagagacccaacgccaacgccgtgcgg
tcgatggagaaggtcattgaaatccacagccagtactggcgctccctgcagcggctcgcc
tccaccgccggctactccctggtcgaggcccagaagtgtgagaacgaggaagccgagact
gtcactgccatggcctcgctgtctgtggccgtgaaggcccctgagaagagacccgacgag
gagcccatggaagaggagccgcctctgtag
DBGET
integrated database retrieval system