Capra hircus (goat): 102187833
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Entry
102187833 CDS
T02910
Symbol
NOD1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
chx
Capra hircus (goat)
Pathway
chx04621
NOD-like receptor signaling pathway
chx05132
Salmonella infection
chx05133
Pertussis
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
102187833 (NOD1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102187833 (NOD1)
05133 Pertussis
102187833 (NOD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
chx04054
]
102187833 (NOD1)
Pattern recognition receptors [BR:
chx04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
102187833 (NOD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
CARD
LRR_6
NLRC4_HD2
LRR_4
NOD2_WH
AAA_16
AAA_22
PIF1
NPHP3_N
ABC_tran
Motif
Other DBs
NCBI-GeneID:
102187833
NCBI-ProteinID:
XP_005679309
UniProt:
A0A452F8W3
LinkDB
All DBs
Position
4:complement(54332427..54424232)
Genome browser
AA seq
954 aa
AA seq
DB search
MEKHGRSEMEMVPSEPHSFIKLLKVNREHLVTHIRNTQCLLDNLLQNDYFSTEDAEIVCA
CPTQPDKVRRILDLVQSKGEEVSEFFLHVIQQLADAYVDLRPWLSEIGFSPSPLIQSKAV
VNTDPVSRYSQKLQQQLGQDSKFILCYAQKEELLLEQMYTDTVVELVNFSNESLGSLDSL
ACLLDATTGVLNEQGEIIFVFGDAGMGKSMLLQRLQSLWAAGQLDPGIKFFFHFRCRTLS
CFKKSAALCLQDLLFKHYCYPEQDPGEVFAFLLRFPHTALFTFDGLDELHSDFDLSSEPD
TSSPWEPAHPLALLASLLSGKLLKGARKLLTARTGVEVPRHLLWKKALLRGFSPSHLRAY
TGRMFPERAVRQRLLDQLEANPNLCSLCAVPLFCWIIFRCFQHFHDTFESSPQLPDLTVT
LTDIFLLVTEVHLNRTQPTSLVQQNTRSQTETLRAGRDTLCSLGRVAHRGMEKSLFVFNQ
DEVQASEVREGDLQLGFLRTVPELGLGEEQQSYEFFHLTLQAFFAALFLVVDDKVGTREL
LRFFQEWTPPEEAVATSTCFPPFLPVQCLGGRGLHGEDPFKNKDHFHFTNLFLCGLLSKG
KQKLLRHLVPTAALRRKRKALWTHLFASLRSHLKNLPRVQSGGFSQVQALPTFIWMLRCI
FETQSEKAGQLAARGICANYLKLTFCNACSADCSALSFVLHHLRKRLALDLDNNNLNDFG
VRELQPCFSRLTVIRLSVNQITDSGVKVLYEELTKYKILTFLGLYNNQITDVGAGYIARI
LDECKGLTHLKLGKNKITSEGGKSLALAVKNSKSIFEVGMWGNQIGDEGAKAFAEALRNH
PSLTNLSLAFNGISTEGGKSLAWALQQNASLRIFWLTKNELDDEVAESFAEMLKVNQTLK
HLWLIQNQITAKGIAQLAEALQKNTGIMEICLNGNLIKPEEAKVFEDEKRIVCF
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcacggccgcagtgagatggaaatggtcccatcagagcctcactccttcatc
aagttgttgaaagtcaaccgggagcatctggtcactcacatccgaaacactcagtgtctg
ctggacaacttgctgcagaatgactacttctccactgaagatgcagagatcgtgtgtgcc
tgccccacgcagcccgacaaggtccgcagaattctggacctggtacagagcaagggcgag
gaggtgtccgagttcttcctccacgtgatccagcaactcgcagacgcttatgtggatctc
aggccttggctgtcagagattggcttctccccttcgccactcattcagagcaaagctgtt
gtcaacactgacccagtgagcagatacagccagaagctgcagcagcaactgggccaggac
tccaagttcattctgtgctatgctcagaaggaggagctgctgttggagcagatgtacacg
gacacggtggtggagcttgtcaacttcagcaacgagagcctgggcagcctggacagcctg
gcctgcctcctggacgcaaccacgggcgtcctcaacgagcagggtgagatcatcttcgtg
tttggcgatgcaggcatgggcaagtccatgctgctgcagcggctgcagagcctctgggca
gcgggccagctggacccagggatcaagttcttcttccacttccgctgccgcaccctcagc
tgcttcaagaagagcgcggcactgtgtctgcaggacctgctcttcaagcattactgctac
ccagagcaggaccccggggaggtttttgccttcctgctgcgctttccccacacagccctc
ttcaccttcgacggcctggacgagctgcactcagacttcgacctgagcagcgagcccgac
acctcctccccttgggagcccgcccacccgctggccctgctggccagtctgctcagtggg
aagctgctcaaaggggcgcgcaagctgctcacggcccgcacgggcgtcgaggtcccgcga
catctcctctggaagaaggcgctcctgcgcggcttctcccccagccacctgcgcgcctac
actgggaggatgttccccgagcgcgctgtgcgccagcgcctgctggatcaactggaggcc
aaccccaacctctgcagcctgtgcgcggtgcccctcttctgctggatcatcttccggtgc
ttccagcacttccacgacacctttgagagctccccgcagctccctgatctcacggtgacg
ctgactgacatcttcctgttggtcaccgaggtccacctgaacaggacgcagcccaccagc
ctggtgcagcagaacactcggagccagacggagaccctccgcgccggccgggacaccctg
tgctcgctgggccgggtggctcacaggggcatggagaagagcctctttgtcttcaaccag
gacgaggtgcaggcgtccgaggtgcgggagggggacctgcagctgggcttccttcggacc
gtgccggagctgggcctcggagaggaacagcagtcctatgagttcttccacctaaccctc
caggccttctttgctgccctgtttctagtggtggacgacaaggtaggcactagggagctg
ctcaggttcttccaggagtggactcctcccgaggaggctgtggccacatcgacctgtttt
cctccttttctccccgtccagtgtctggggggccgtggcctgcatggggaagaccccttc
aagaacaaggatcactttcatttcaccaacctcttcctgtgcgggctgttgtccaaaggc
aaacagaaactcctgcgacacctggtgcccacagctgccctgcggcgaaaacgcaaggcc
ctgtggactcacctgttcgccagcctgcgctcccacctgaagaacctgccccgggtgcag
tctgggggcttcagccaggtgcaggccctgcctacctttatctggatgttgcgctgcatc
tttgagacgcagagtgagaaggcggggcagctggcagccaggggcatctgtgccaactac
ctcaagctgaccttctgcaacgcctgctcggctgactgcagtgccctctccttcgtcctg
catcacttgcgcaagcggctggcgctcgacctggacaacaacaacctcaacgacttcggc
gtgcgtgaactgcagccatgcttcagccgcctcactgtcatcagactcagtgtgaaccag
atcactgacagtggggtgaaggtgctatatgaagagctgaccaaatacaaaattctgaca
tttttaggcttatacaacaaccaaatcaccgatgtcggagccgggtacatcgccagaatc
ctggatgagtgcaaaggcctcacacacctgaaattgggaaaaaacaaaataacaagtgaa
ggaggaaagagtctcgctctggctgtgaagaacagcaaatccatctttgaagtcgggatg
tggggcaatcaaatcggtgatgaaggagcaaaggccttcgcagaggctctgaggaaccac
cccagcttgaccaacctgagtcttgcattcaacggcatctctacagaaggaggaaagagc
ctcgcgtgggccctgcagcagaatgcatctctgagaatattctggctcaccaaaaatgaa
cttgatgatgaagtggcagagagctttgcagagatgttgaaagtcaaccagacattgaaa
catttatggcttatccagaaccagatcacagccaaggggattgcccagttggcagaagca
ttacagaagaacactggcataatggagatttgcttaaatggaaacttgataaagcccgag
gaggccaaggtctttgaagatgagaagcggattgtctgtttctga
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