Capra hircus (goat): 102187967
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Entry
102187967 CDS
T02910
Symbol
SOX6
Name
(RefSeq) transcription factor SOX-6 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
chx
Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
chx03000
]
102187967 (SOX6)
Transcription factors [BR:
chx03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102187967 (SOX6)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
102187967
NCBI-ProteinID:
XP_017915078
EnsemblRapid:
ENSCHIG00000021925
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All DBs
Position
15:complement(45807865..46523256)
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AA seq
873 aa
AA seq
DB search
MYLFFSELICICLHVRRQKTWADMYSTDTRMSSKQATSPFACTADGEEAMTQDLTSREKE
EGSDQHVASHLPLHPIMHNKPHSEELPTLVNTIQQDADWDSVLSSQQRMESENNKLCSLY
SFRNTSTSPHKPDEGSRDREIMTSVTFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEDS
SCMEKLLSKDWKEKMERLNTSELLGEIKGTPESLAEKERQLSTMITQLISLREQLLAAHD
EQKKLAASQIEKQRQQMDLARQQQEQIARQQQQLLQQQHKINLLQQQIQQVQGHMPPLMI
PIFPHDQRTLAAAAAAQQGFLFPPGITYKPGDNYPVQFIPSTMAAAAASGLSPLQLQKGH
VSHPQINPRLKGLSDRLGRSLDTFEHGGGHSYNHKQIEQLYAAQLASMQVSPGAKMPSTP
QPPNTAGAVSPTGIKNEKRGTSPVTQVKDEAAAQPLNLSSRPKTAEPVKSPTSPTQSLFP
ASKTSPVNLPNKSSIPSPIGGSLGRGSSLGKWKSQHQEETYELDILSSLNSPALFGDQDT
VMKAIQEARKMREQIQREQQQQQPHGVDGKLSTLNNMGLNNCRNEKERTRFENLGPQLTG
KSSEDGKLGPGVIDLTRPEDAEGSKAMNGSAAKLQQYYCWPTGGATVAEARVYRDARGRA
SSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQA
RLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQEMRQFFTVGQQPQIPI
TTGTGVVYPGAITMATTTPSPQMTSDCSSTSASPEPSLPVIQSSYGMKTDGGSLAGNEMI
NGEDEMEMYDDYEDDPKSDYSSENEAPEAVSAN
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgtatctgtttttctcagagctgatttgtatttgtctacatgtaagaaggcagaaaact
tgggctgatatgtactctactgatacaagaatgtcttccaagcaagccacctctccattt
gcctgtacagctgatggagaggaagcaatgacccaagatttgacctcaagggaaaaggaa
gagggcagtgatcaacatgtggcctcccatctgcctctgcaccccataatgcacaacaaa
cctcactctgaggagctaccaacacttgtcaataccattcaacaggatgctgactgggac
agtgttctgtcgtctcagcaaagaatggagtcagagaataataagttatgttccctatat
tccttccgaaatacctctacctcaccacacaagcctgacgaagggagtcgggaccgcgag
ataatgaccagtgttacttttggaaccccagaacgccgcaaagggagccttgccgatgtg
gtggacacactgaaacagaagaagcttgaggaaatgactcggactgaacaagaggattcc
tcctgcatggaaaaactactttcaaaagattggaaggaaaaaatggaaagattaaatacc
agtgaacttcttggagaaattaaaggtacacctgagagcctggcagaaaaagaacggcag
ctctctaccatgatcacccagctgatcagtttacgggagcagctcctggcagcgcatgat
gagcagaaaaaactggcagcctcgcaaattgagaagcaacggcagcaaatggaccttgct
cgccaacagcaagaacagattgcaagacaacagcagcaactcctgcaacagcagcacaaa
attaatctcctgcaacaacagatccagcaggttcagggtcacatgcctccgctcatgatc
ccaatttttccacatgaccagcggaccctggcagcagctgctgctgcccaacagggattc
ctcttcccccctggaataacatacaaaccaggtgataactaccccgtacagttcattcca
tcaacaatggcagctgctgctgcttctggactcagccctttacagctccagaaaggtcat
gtctcccacccacaaattaacccaaggctaaagggcctaagtgaccgtttgggcaggagt
ttggacacctttgaacatggtggtggccactcttacaaccacaaacagattgagcagctc
tatgccgctcagctggccagcatgcaggtgtcacctggagcaaagatgccatcaactcca
cagccaccaaacacagcaggggcagtctcacctactgggataaaaaatgaaaagagaggg
accagccctgtaactcaagttaaggatgaagcagcagcgcagccgctgaatctctcatcc
cgacccaagacagctgagcctgtaaagtccccaacatctcccacccagagcctcttccca
gccagcaaaaccagccctgtcaatctgcctaacaaaagcagcatccccagccccattgga
ggaagcttgggaagaggatcctctttaggtaaatggaaaagtcaacaccaggaagagact
tatgaattagatatcctgtccagtctcaactctcctgccctgtttggggatcaggataca
gtgatgaaagctattcaggaggctcggaagatgcgagaacagatccagcgggagcaacaa
cagcaacagccacatggtgttgatgggaaactgtccaccctgaataatatggggctgaac
aactgtaggaatgaaaaggaaagaacacgctttgaaaatttggggccccagttaacagga
aagtcaagcgaagatggaaagctgggcccaggtgtcatcgatcttacccggccagaagat
gcagagggaagtaaagcaatgaatggctctgcagctaaactacagcagtattattgttgg
ccaacaggaggtgccactgtggctgaagcacgagtctacagggatgcccgaggccgggcc
agcagcgagccacacatcaagcgaccaatgaatgcattcatggtttgggcaaaggatgag
aggaggaaaatccttcaggcctttcctgacatgcataactccaacatcagcaaaatctta
gggtctcgttggaaatccatgtccaaccaagaaaagcaaccttattatgaggagcaggcc
cggctaagcaagatccacttagagaagtacccgaactataaatacaaacctcgaccgaaa
cgcacctgcattgtcgatggcaagaagctccggattggggaatacaagcaactgatgagg
tctcggagacaggagatgaggcagttctttactgtggggcagcagcctcagattccaatc
accacaggaacaggtgttgtgtatcctggtgctattactatggcaactaccacaccatca
cctcagatgacatctgactgctctagcacctcggccagcccagagcccagcctcccggtc
atccagagctcttatggtatgaagacagacggtggaagcctagctggaaatgaaatgatt
aatggagaggatgaaatggaaatgtatgacgactatgaagacgaccccaaatcagactat
agcagtgaaaatgaagccccggaagctgtcagtgccaactga
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