Capra hircus (goat): 102188478
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Entry
102188478 CDS
T02910
Symbol
IGHMBP2
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
chx
Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chx03009
]
102188478 (IGHMBP2)
03012 Translation factors [BR:
chx03012
]
102188478 (IGHMBP2)
Enzymes [BR:
chx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
102188478 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
102188478 (IGHMBP2)
Ribosome biogenesis [BR:
chx03009
]
Eukaryotic type
Other ribosome biogenesis factors
102188478 (IGHMBP2)
Translation factors [BR:
chx03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
102188478 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_30
AAA_19
Viral_helicase1
zf-AN1
ResIII
DEAD
nSTAND3
AAA_22
UvrD-helicase
AAA_16
SLFN-g3_helicase
Helicase_RecD
AAA_25
PhoH
Flavi_DEAD
IstB_IS21
Zot
AAA
DnaB_C
UvrD_C_2
AAA_18
ATPase
ABC_tran
NTPase_1
Motif
Other DBs
NCBI-GeneID:
102188478
NCBI-ProteinID:
XP_017898765
EnsemblRapid:
ENSCHIG00000011703
UniProt:
A0A452E9K6
LinkDB
All DBs
Position
29:47299510..47327801
Genome browser
AA seq
987 aa
AA seq
DB search
MASTPVESFVTKQLELLELERDAEVEERRSWQENVSLKELQNRGVCLLKLQVSSQRTGLY
GRLLITLEPRRCVSAAVLPSNSFTSGDIVGLYDESGQLATGILTRITQKAVTVAFDESHD
SQLSLDQEHSYRLLKLANDVTYKRLKKALISLKKYHSGPASSLIEVLFGTSDPSPPSEMP
PLTFCNPALDASQQEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAVKRGSKVLCCAP
SNVAVDNLVERLAQWKQRILRLGHPARLLDSIQQHSLDAVLARSDGARIVADIRRDIDQA
WAKNRKTQDKREKSNFRDEIKLLRKELKDREEAAMLESLAAANVILATNTGASADGPLKL
LPDGHFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTIVSHKAALAGLSRSLM
ERLAERHGAGAVRMLTVQYRMHQAIARWASEALYHGQLTAHPSVAGHLLRDLPGVAATEE
TGVPLLLVDTAGCGLLELEEDDEQSKGNPGEVRLVGLHVQALVDAGVRATDIAVITPYNL
QVDLLRQNLAHRHPELEIRSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTR
ARRHVAVVCDSRTVSNHAFLKTLVDYLTEHGEVRTAFEYLDDIVPENYSHEGAQAGGKPR
GSAATARRAPGGTGPGQKKPSGAPLGSSEPQPQPSLDGGGSREGAGSRAGADGFRATIVE
FMASEKTQLEFPASLNPHDRLRVHQIAEEFGLRHDSTGKGRERFITVSKRALPTPAAPGG
RAPLCPETPSSKQPEPPEQPEPPEQPEPPVRESSGWDQPDLKALHLERLQRAGAQQEQRA
KEGPCAPGPAPRKLPEKKKKRDARGPVAIELPAEEDFDALVSAAIKADNTCGFAKCAASV
VTLGQLCLHCGRRYCLGHHLPEVHGCGERARAHARQRISREGVLYPGSGTKDRSLDPAKR
AQLQRRLDKKLDELTGQRRSKRKEKGK
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgacacctgtggagagcttcgtgaccaagcagttggagctgctggagctcgag
cgagacgcggaggtcgaggagcgcagatcctggcaggaaaatgtctctctgaaggaactc
cagaaccgaggcgtctgtttgctgaagctgcaggtatccagccagcggaccgggctgtac
ggacggctgctcattaccctcgagcccaggagatgtgtgtctgcggctgttcttcccagt
aacagctttacttccggtgacatcgtgggtctgtatgatgaaagcggtcagctggccact
gggatcctgacccgcatcacccagaaagcggtcaccgtggcctttgatgagtcccacgat
tcccagctgagtttggaccaagagcattcctacagactgttgaagcttgccaacgatgtg
acgtacaagcgactgaaaaaagctctgatttccctaaagaagtatcactctggccctgcg
tcctcgctcatagaggtcctctttggcacatcagaccccagtcctcccagcgagatgccc
ccgctgaccttctgcaaccccgccctggacgcctcccagcaggaagcggtcctgttcgcg
ctgtcccagaaggaactcgccatcattcacgggcccccgggaactgggaagaccaccact
gtggtggagatcatccttcaagctgtgaaacggggctcaaaggttctgtgctgtgcgccc
tctaacgttgctgtggacaacttggtggagcggctggcccagtggaagcagaggattctc
cgcctcggccacccagcccgcctcctggactccatccagcagcactcactggacgcggtc
ttggcacgcagcgacggcgcccggatcgtggccgacatcaggagggacatcgaccaggcc
tgggcgaaaaacagaaagacccaggataagagagagaagagtaattttcgagatgaaatc
aagctgctgaggaaggagctgaaggacagggaggaggcagccatgctggagagcctggcg
gcagccaatgtaatcctcgccacaaacacaggcgcctctgcggacggcccgctgaagctg
ctgcccgacggccactttgacgtggtggtcatcgatgagtgtgcccaggccctggaagcc
agctgctggatccccctgctgaaggcccggaagtgcatcctggccggagaccacaagcag
ctgccccccaccatcgtctcccacaaggccgcgctggcggggctgtcgcgcagcctgatg
gagcgcctggcggagcgacacggagccggggcggtgcggatgctgacggtgcaataccgc
atgcaccaggccattgcgcgctgggcctcggaggccctgtaccacgggcagctcaccgcc
cacccttccgtggccgggcacctcctgagggaccttccaggcgtggcggccaccgaggag
acgggcgtgcccctgctgctggtggacacggctggctgcgggctgctggagctggaggag
gatgacgagcagtccaaagggaaccccggtgaagtgcgccttgtcggcctgcatgtccag
gcgctggtggacgcaggtgtccgggccaccgacatcgccgtcatcactccgtataatctg
caggtggacctgctcagacagaacctcgcgcacaggcacccagagcttgagataaggtcc
gtcgatggcttccagggccgggagaaggaagctgtgatcctgtctttcgtcaggtccaac
aggaaaggtgaggtgggcttcctcgctgaggaccggcgcatcaacgtggcggtcacccgc
gcacggcgccacgtggccgtggtctgtgactcccgcacggtcagcaaccacgccttcctg
aagaccctggtggactacctcacggaacacggcgaggtgcgcacggcctttgagtatctt
gatgacatcgtccccgagaactactcccacgagggtgcccaggcgggcgggaagccccgg
ggctctgctgcgacagccaggagggcccccggggggaccgggccgggccaaaagaagccg
agcggggcgcctttgggctcctccgagccgcagcctcagcccagccttgatggaggcggc
agccgggagggtgccgggagcagagctggtgcagacggcttcagggccacgattgtggag
ttcatggcgagtgagaagacgcagctggagttccctgcctccctgaacccacacgacagg
ctgcgggtccaccagatcgctgaggagtttgggctgaggcatgacagcaccgggaagggg
agggaacgcttcatcacggtgagcaagagggccctgcccacccctgcggcgccaggcggc
agagcccctctgtgtcccgagacccccagctccaagcagccggagccacccgagcagccg
gagccccccgagcagccggagccccctgtcagggagtcgagcggctgggaccagccggac
ctgaaggcgctgcacctggagaggctgcagagggcgggggcccagcaggagcagcgggcc
aaggaggggccctgcgccccgggccccgccccccggaagttaccggaaaagaagaagaag
agagatgcgagaggacccgtggccatagagctgcccgccgaggaggactttgacgccctg
gtctcggccgccatcaaggcagacaacacctgcggcttcgctaagtgcgcggccagcgtc
gtgaccctgggccagctctgtctgcactgcggccgccgctactgcctcggccaccacctg
cccgaggtccatggttgtggggagagggctcgcgcccacgctcggcagaggatcagccgg
gaaggggtcctctaccccggcagtgggaccaaggacaggtccctggaccctgccaagcgg
gcccagctgcagaggaggctggacaagaagctggacgagctgaccggccagaggcggagc
aagaggaaggagaagggcaagtga
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