KEGG   Capra hircus (goat): 102188478
Entry
102188478         CDS       T02910                                 
Symbol
IGHMBP2
Name
(RefSeq) DNA-binding protein SMUBP-2
  KO
K19036  ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3]
Organism
chx  Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:chx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:chx03009]
    102188478 (IGHMBP2)
   03012 Translation factors [BR:chx03012]
    102188478 (IGHMBP2)
Enzymes [BR:chx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     102188478 (IGHMBP2)
    5.6.2.5  RNA 5'-3' helicase
     102188478 (IGHMBP2)
Ribosome biogenesis [BR:chx03009]
 Eukaryotic type
  Other ribosome biogenesis factors
   102188478 (IGHMBP2)
Translation factors [BR:chx03012]
 Eukaryotic type
  Initiation factors
   Initiation associated factors
    102188478 (IGHMBP2)
SSDB
Motif
Pfam: AAA_11 AAA_12 SMUBP-2_HCS1_1B R3H AAA_30 AAA_19 Viral_helicase1 zf-AN1 ResIII DEAD nSTAND3 AAA_22 UvrD-helicase AAA_16 SLFN-g3_helicase Helicase_RecD AAA_25 PhoH Flavi_DEAD IstB_IS21 Zot AAA DnaB_C UvrD_C_2 AAA_18 ATPase ABC_tran NTPase_1
Other DBs
NCBI-GeneID: 102188478
NCBI-ProteinID: XP_017898765
EnsemblRapid: ENSCHIG00000011703
UniProt: A0A452E9K6
LinkDB
Position
29:47299510..47327801
AA seq 987 aa
MASTPVESFVTKQLELLELERDAEVEERRSWQENVSLKELQNRGVCLLKLQVSSQRTGLY
GRLLITLEPRRCVSAAVLPSNSFTSGDIVGLYDESGQLATGILTRITQKAVTVAFDESHD
SQLSLDQEHSYRLLKLANDVTYKRLKKALISLKKYHSGPASSLIEVLFGTSDPSPPSEMP
PLTFCNPALDASQQEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAVKRGSKVLCCAP
SNVAVDNLVERLAQWKQRILRLGHPARLLDSIQQHSLDAVLARSDGARIVADIRRDIDQA
WAKNRKTQDKREKSNFRDEIKLLRKELKDREEAAMLESLAAANVILATNTGASADGPLKL
LPDGHFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTIVSHKAALAGLSRSLM
ERLAERHGAGAVRMLTVQYRMHQAIARWASEALYHGQLTAHPSVAGHLLRDLPGVAATEE
TGVPLLLVDTAGCGLLELEEDDEQSKGNPGEVRLVGLHVQALVDAGVRATDIAVITPYNL
QVDLLRQNLAHRHPELEIRSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTR
ARRHVAVVCDSRTVSNHAFLKTLVDYLTEHGEVRTAFEYLDDIVPENYSHEGAQAGGKPR
GSAATARRAPGGTGPGQKKPSGAPLGSSEPQPQPSLDGGGSREGAGSRAGADGFRATIVE
FMASEKTQLEFPASLNPHDRLRVHQIAEEFGLRHDSTGKGRERFITVSKRALPTPAAPGG
RAPLCPETPSSKQPEPPEQPEPPEQPEPPVRESSGWDQPDLKALHLERLQRAGAQQEQRA
KEGPCAPGPAPRKLPEKKKKRDARGPVAIELPAEEDFDALVSAAIKADNTCGFAKCAASV
VTLGQLCLHCGRRYCLGHHLPEVHGCGERARAHARQRISREGVLYPGSGTKDRSLDPAKR
AQLQRRLDKKLDELTGQRRSKRKEKGK
NT seq 2964 nt   +upstreamnt  +downstreamnt
atggcctcgacacctgtggagagcttcgtgaccaagcagttggagctgctggagctcgag
cgagacgcggaggtcgaggagcgcagatcctggcaggaaaatgtctctctgaaggaactc
cagaaccgaggcgtctgtttgctgaagctgcaggtatccagccagcggaccgggctgtac
ggacggctgctcattaccctcgagcccaggagatgtgtgtctgcggctgttcttcccagt
aacagctttacttccggtgacatcgtgggtctgtatgatgaaagcggtcagctggccact
gggatcctgacccgcatcacccagaaagcggtcaccgtggcctttgatgagtcccacgat
tcccagctgagtttggaccaagagcattcctacagactgttgaagcttgccaacgatgtg
acgtacaagcgactgaaaaaagctctgatttccctaaagaagtatcactctggccctgcg
tcctcgctcatagaggtcctctttggcacatcagaccccagtcctcccagcgagatgccc
ccgctgaccttctgcaaccccgccctggacgcctcccagcaggaagcggtcctgttcgcg
ctgtcccagaaggaactcgccatcattcacgggcccccgggaactgggaagaccaccact
gtggtggagatcatccttcaagctgtgaaacggggctcaaaggttctgtgctgtgcgccc
tctaacgttgctgtggacaacttggtggagcggctggcccagtggaagcagaggattctc
cgcctcggccacccagcccgcctcctggactccatccagcagcactcactggacgcggtc
ttggcacgcagcgacggcgcccggatcgtggccgacatcaggagggacatcgaccaggcc
tgggcgaaaaacagaaagacccaggataagagagagaagagtaattttcgagatgaaatc
aagctgctgaggaaggagctgaaggacagggaggaggcagccatgctggagagcctggcg
gcagccaatgtaatcctcgccacaaacacaggcgcctctgcggacggcccgctgaagctg
ctgcccgacggccactttgacgtggtggtcatcgatgagtgtgcccaggccctggaagcc
agctgctggatccccctgctgaaggcccggaagtgcatcctggccggagaccacaagcag
ctgccccccaccatcgtctcccacaaggccgcgctggcggggctgtcgcgcagcctgatg
gagcgcctggcggagcgacacggagccggggcggtgcggatgctgacggtgcaataccgc
atgcaccaggccattgcgcgctgggcctcggaggccctgtaccacgggcagctcaccgcc
cacccttccgtggccgggcacctcctgagggaccttccaggcgtggcggccaccgaggag
acgggcgtgcccctgctgctggtggacacggctggctgcgggctgctggagctggaggag
gatgacgagcagtccaaagggaaccccggtgaagtgcgccttgtcggcctgcatgtccag
gcgctggtggacgcaggtgtccgggccaccgacatcgccgtcatcactccgtataatctg
caggtggacctgctcagacagaacctcgcgcacaggcacccagagcttgagataaggtcc
gtcgatggcttccagggccgggagaaggaagctgtgatcctgtctttcgtcaggtccaac
aggaaaggtgaggtgggcttcctcgctgaggaccggcgcatcaacgtggcggtcacccgc
gcacggcgccacgtggccgtggtctgtgactcccgcacggtcagcaaccacgccttcctg
aagaccctggtggactacctcacggaacacggcgaggtgcgcacggcctttgagtatctt
gatgacatcgtccccgagaactactcccacgagggtgcccaggcgggcgggaagccccgg
ggctctgctgcgacagccaggagggcccccggggggaccgggccgggccaaaagaagccg
agcggggcgcctttgggctcctccgagccgcagcctcagcccagccttgatggaggcggc
agccgggagggtgccgggagcagagctggtgcagacggcttcagggccacgattgtggag
ttcatggcgagtgagaagacgcagctggagttccctgcctccctgaacccacacgacagg
ctgcgggtccaccagatcgctgaggagtttgggctgaggcatgacagcaccgggaagggg
agggaacgcttcatcacggtgagcaagagggccctgcccacccctgcggcgccaggcggc
agagcccctctgtgtcccgagacccccagctccaagcagccggagccacccgagcagccg
gagccccccgagcagccggagccccctgtcagggagtcgagcggctgggaccagccggac
ctgaaggcgctgcacctggagaggctgcagagggcgggggcccagcaggagcagcgggcc
aaggaggggccctgcgccccgggccccgccccccggaagttaccggaaaagaagaagaag
agagatgcgagaggacccgtggccatagagctgcccgccgaggaggactttgacgccctg
gtctcggccgccatcaaggcagacaacacctgcggcttcgctaagtgcgcggccagcgtc
gtgaccctgggccagctctgtctgcactgcggccgccgctactgcctcggccaccacctg
cccgaggtccatggttgtggggagagggctcgcgcccacgctcggcagaggatcagccgg
gaaggggtcctctaccccggcagtgggaccaaggacaggtccctggaccctgccaagcgg
gcccagctgcagaggaggctggacaagaagctggacgagctgaccggccagaggcggagc
aagaggaaggagaagggcaagtga

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