Capra hircus (goat): 102188509
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Entry
102188509 CDS
T02910
Symbol
PAN3
Name
(RefSeq) PAB-dependent poly(A)-specific ribonuclease subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
chx
Capra hircus (goat)
Pathway
chx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102188509 (PAN3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chx03019
]
102188509 (PAN3)
Messenger RNA biogenesis [BR:
chx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102188509 (PAN3)
mRNA degradation factors
3'-5' decay
Pan complex
102188509 (PAN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
zf-CCCH
zf_CCCH_4
zf-CCCH_4
Pkinase
Torus
Motif
Other DBs
NCBI-GeneID:
102188509
NCBI-ProteinID:
XP_017912083
UniProt:
A0A452E5Z5
LinkDB
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Position
12:54770572..54892816
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AA seq
912 aa
AA seq
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MNSGGGLPPPSAAASSASSSLAAAAAVVAVAPPGVGGVPGGAAAAAAAGVKLKYCRYYAK
DKTCFYGEECQFLHEDPAAGAAPGLGLHSNSVPLALAGAPGAGFPPGAVPAGGAGPPAGP
KKPDLGGPGPGAGGGGGGNSGVLDGPRLAIPGMDGGALTDTSLTDSYFSTSFIGVNGFGS
PVETKYPVMQRMTNSSSSPSLLNDSAKPYAGHDPLTSPASSLFNDFGALNISQRRKPRKY
RLGMLEERLVPMGSKARKAKNPIGCLADRCKSGVPINMVWWNRVTENNLQTPNPTASEFI
PKGGSTSRLSNTSQSHASAFSQVFSHPSMGTPAAAGLAPGMSLSAGSSPLHSPKITPHTS
PAPRRRSHTPNPANYMVPSSASTPGNNPVSQTPSSGQVIQKETVGGTTYFYTDTTPAPLS
GMRSFKNYHRTACRAEGQIIEVFPNYHIYPPTAPHVAYMQPKANAPSFFMADELRQELIN
RHLITMAQIDQADMPAVPTEVDSYHSLFPLEPLPPPNRIQKSSNFGYITSCYKAVNSKDD
LPYCLRRIHGFRLVNTKCMVLVDMWKKIQHSNIVTLREVFTTKAFSEPSLVFAYDFHAGG
ETMMSRHFNDPNADAYFTKRKWGQHDGPLPRQHAGLLPESLIWAYIVQLSSALRTIHTAG
LACRVMDPTKILITGKTRLRVNCVGVFDVLTFDNSQNNNPLALMAQYQQADLISLGKVVL
ALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVNDIMPMIGARFYT
QLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWSETGDRYLLKLFR
DHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVVTYSDLKRCFENT
FQELIAAANGQL
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtggcggcggcctcccgcccccctcggccgccgcctcctccgcgtcctcctcg
ctggcggcggccgcggcggtagtggcggtggccccgccgggggtcgggggcgtccccggc
ggggcggcggcggcggcagcggcgggggtgaagctgaagtactgccgctactacgccaag
gataagacgtgcttctacggggaggagtgtcagttcctgcatgaggacccagccgctggg
gccgcgccgggcctcggcctccatagcaacagcgtccccctggctctggcgggcgcgccc
ggggccggcttcccgcccggagcggtcccggccggaggagccgggccgcccgcggggccc
aagaagccggacctggggggccccgggcccggagccggcggaggcggaggtggcaacagt
ggggtcctcgacgggccgcggctggcaattcctggaatggatggaggtgctttaactgat
acgagtctcacagattcctatttcagcaccagctttattggagtcaatggatttggaagc
cctgtggagacgaagtatcctgtgatgcagagaatgactaatagtagcagctccccaagc
cttctaaatgacagtgccaagccatacgcaggccacgatcctctaacttcacctgcttca
tccttgtttaatgactttggtgccctcaacatctctcagagaagaaagccaaggaagtat
cgcctggggatgctggaggagaggctagttccgatgggatcaaaggcacgaaaagcaaag
aaccctattggctgccttgctgacaggtgtaaatcaggagtacccatcaatatggtttgg
tggaacagagtcacagaaaacaatttacagacaccaaatcctactgcaagtgagtttatt
cccaaaggaggatcaacctccaggctgagtaacacgtcccagtcacatgcgtctgccttc
tctcaagtgttctctcacccatccatggggactcctgctgctgccggattagcaccagga
atgtcattgtctgctggatcctcccctcttcactcccccaaaatcactccacatacttct
cctgcccccagaagaagaagccacactccaaatccagcaaattatatggtgccttctagt
gcctctacgcccgggaataatcctgtttctcagacaccatcttctggtcaagtgatccaa
aaggaaactgttggtgggacgacgtacttttatacagacacaactccagcacctttgagt
ggaatgagatctttcaaaaattatcacagaacagcttgccgagcagaaggtcaaataatt
gaggtatttcccaactaccacatctatcctccaactgcacctcacgttgcttatatgcag
ccaaaagcaaacgcaccttccttcttcatggctgatgaactgcgacaggagctgataaac
agacatttaataacaatggctcaaatcgatcaagcggatatgccagcagtccctacagaa
gttgacagctaccacagcctgttccctctagaaccactgccaccacccaaccggatacag
aaatcaagtaattttggatacattacatcctgctacaaagctgtaaatagcaaagatgat
ctgccttattgccttcggaggatacatggttttcgtcttgttaacacaaagtgcatggta
ttggtcgatatgtggaaaaaaattcagcactcaaatattgtaaccttgcgtgaagtgttt
accactaaagctttctcagagccttctcttgtgtttgcatatgatttccatgctggagga
gagaccatgatgagcagacacttcaatgaccccaacgcggatgcctatttcacaaagaga
aagtggggtcaacatgatggaccgttgcccagacagcatgctggattgttgccagaatct
cttatttgggcatatattgtccagctgagttctgcactgcgtaccattcatacagcaggt
ttggcatgtcgcgttatggacccaacaaagattctgataactggcaaaacaaggttgcga
gtaaattgtgttggagtttttgatgttttaacatttgataacagtcagaataataatcca
ttggcattaatggctcaataccagcaagcagatctgatatcattaggaaaagttgtgttg
gctttggcttgcaactctttggcaggaattcagcgagagaatttacagaaagccatggaa
ctggtgacaatcaactactcctctgacctgaagaatctgattttatatttgttgactgac
caaaacaggatgcgaagtgtaaatgacatcatgcccatgattggtgctcgattttatact
caattggatgctgctcaaatgagaaatgatgtcatagaggaagaccttgcaaaggaggtt
caaaatggaagactgtttaggcttctagcaaaattgggaacaatcaatgagaggccggag
tttcagaaggatcctacctggtcggagacgggagaccggtacctgttgaagctctttagg
gatcatctttttcatcaggtgacagaagcgggtgctccttggattgacctcagtcatatc
atttcttgtcttaacaagttagatgctggtgtgccagaaaaaataagcctcatttccaga
gacgagaagagtgttcttgtggtgacttacagtgacttaaagcgatgttttgaaaatact
tttcaagaactgattgcagctgcgaatggtcagttgtag
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