Capra hircus (goat): 102188615
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Entry
102188615 CDS
T02910
Symbol
PCDH18
Name
(RefSeq) protocadherin-18 isoform X1
KO
K16499
protocadherin delta 2
Organism
chx
Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
chx04515
]
102188615 (PCDH18)
Cell adhesion molecules [BR:
chx04515
]
Cadherins
Protocadherins
102188615 (PCDH18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
BBS1
PAH
Syndecan
Cadherin_C_2
TMEM154
ATG31
MPS-4
DUF3418
Motif
Other DBs
NCBI-GeneID:
102188615
NCBI-ProteinID:
XP_005691302
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All DBs
Position
17:complement(50676343..50691115)
Genome browser
AA seq
1135 aa
AA seq
DB search
MYQMNAKMHFTFVFALLVVSFNLDVLGKNLKYRIYEEQRVGSVIARLSEDVADVLVKLPN
PSTVRFRAMQRGNYPLLVVNEDNGEISIGSKIDREQLCQKNLNCSIEFDVITLPTEHLQL
FHIEVEVLDINDNSPQFSRSLIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAND
FFNIEVRSRTDGAKYAELIVVRELDRELKSSYELQLTASDMGVPQRSGSSILKISISDSN
DNSPAFEQQSYIIQLLENSPVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIIETFKID
SERGHLTLFKQVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEISINLMS
PGKEEISYIFEGDPIDTFVALVRVQDKDSGLNGEIVCKLHGHGHFKLQKTYENNYLILTN
ATLDREKRSEYSLTVIAEDKGTPSLSTVKHFTVQINDINDNPPHFQRSRYEFAISENNSP
GAYITTVTATDPDLGENGQVTYTILESFILGSSITTYVTVDPSNGAIYALRIFDHEEVSQ
ITFVVEARDGGSPKQLVSNTTVVLTIIDENDNVPVVIGPALRNNTAEISIPKGAESGFHV
TRIRAIDRDSGVNAELSCSIVAGNEENIFVIDPRSCDVHTNVSMESVPYTEWELSVVIQD
KGNPQLHTKVLLKCVIFEYAESVTSTAMTSVSQAPLDVSMIIIISLGAICAVLLVIMVLF
ATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTVNGTLPIRSHHRSSPS
SSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQLLSMLHQ
GQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEG
FSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQQ
QHPHQSLEDDVQPVDSSEKKKSFSTFGKDSPSEEDSGDTSTSSLLSEMSSVFQRLLPPSL
DTYSECSEMDRSNSLERRKGPLPAKTVGYPQGVAAWAASTHFQNPTNNSGPPLGTHSSVQ
PSSKWLPAMEEIPENYEEDDFDNVLNHLNDGKHELMDASELVAEINKLLQDVRQS
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaaatgaatgctaaaatgcactttacgtttgtttttgcactcttggtggtgtct
ttcaacttggatgtgctgggcaagaatttgaaatacaggatttatgaggagcagagggtt
ggatcggtaattgcaagactatcagaggatgtggctgatgtgttagttaagctacctaat
ccttctactgttcgcttccgagccatgcaacggggaaattatcctctactcgtggtcaac
gaggataacggggaaatcagcataggatcaaaaattgaccgcgagcaactatgccagaaa
aacttgaactgttccattgagtttgatgtgatcactctgcccactgagcatctgcagctt
ttccatattgaagttgaagtgctggatattaatgacaattcgccccagttttcaagatct
ctcatacctattgagatttcagaaagcgcggccgtggggacccgtatccctctagacagt
gcatttgatccagatgttggggaaaattccctccacacgtactctctctctgccaatgat
ttttttaatatcgaggttcgaagcaggactgatggagcgaagtatgcagaactcatagtg
gtcagagagctggatcgggaactgaagtcaagctatgagcttcagctcaccgcctccgac
atgggggtgcctcagaggtctggctcatccatactaaaaatcagtatttcagactctaat
gacaacagccctgcttttgagcagcagtcttatataatacaactcttagaaaactcccct
gttggcactttgctccttgatctgaatgccactgatccagatgagggcgctaatgggaaa
attgtctattccttcagcagtcatgtgtctcccaaaattatagagacttttaagattgat
tcagaaagaggacatttgactcttttcaagcaggtggattatgaaatcaccaaatcctat
gagattgatgttcaggctcaagatttgggtccaaattcaatcccagcacattgcaaaatt
ataattaaggttgtggatgttaatgacaataaacctgaaattagcataaacctcatgtcc
cctggaaaagaagaaatttcttatatttttgaaggggatcctattgacacattcgttgcc
ttggtcagggttcaggacaaggattctgggctgaatggagaaatagtttgtaagcttcat
ggacatggtcactttaaacttcagaagacttatgaaaacaattatttaatcttgacgaat
gccacgctggatagagaaaagagatctgaatacagtttgactgtaatcgctgaggacaag
gggacacccagtctctctacagtaaaacattttactgttcaaatcaatgatataaatgac
aatccaccccacttccagagaagtcgatatgaatttgcaatctcagagaataactcaccc
ggggcatatatcaccaccgttacagccacagatcctgatcttggagaaaatgggcaagtg
acatacaccattttggagagttttatcctgggaagttccataactacatatgtaaccgtt
gacccatctaatggagccatctacgccctcagaatctttgaccatgaggaggtgagtcag
atcacttttgtggtcgaagcaagagatggtggaagtccaaagcaacttgtaagcaatacc
acagttgtgctcaccatcattgatgaaaatgacaatgtccctgtggttatagggcctgca
ctgcgcaataacacggcagaaatctccatccccaaaggggctgaaagcggctttcatgtc
acaagaattagggcaattgacagagactctggtgtgaatgcagaactcagctgctccata
gtagcaggtaatgaggagaatatctttgtaattgatccacgatcatgtgacgtccatacc
aacgtaagcatggaatctgttccctacacagaatgggagctctcagttgtcatccaggac
aaaggcaatcctcagctgcataccaaagtccttctgaagtgtgtgatctttgaatatgca
gagtcggtgacaagtacagcaatgacctcagtaagccaggcacccttggatgtctccatg
attataatcatttccttaggagcaatttgtgcagtgttgttggttattatggtgctgttt
gcaaccaggtgtaaccgagaaaaaaaagacactagatcctacaactgcagggtagcagaa
tcgacataccagcatcaccccaaaagaccctccaggcagatccacaaaggggacatcaca
ttggtgcctaccgttaacggcaccctgcccatcagatctcatcacaggtcatctccgtct
tcatctcccaccttagaaagagggcaaatgggcagccggcagagtcacaacagtcaccag
tccctcaacagtttggtgaccatctcatcaaaccacgtgccagagaatttctcattagaa
ctcacccatgccacccctgctgttgagcaggtctcccagcttctttcaatgcttcaccag
ggacagtatcagccaaggccaagttttagaggaaacaaatattccaggagctatagatat
gcccttcaagacatggacaaatttagcttgaaagacagtggccgtggtgacagtgaagca
ggagacagtgattatgatctggggcgagattctccaatagacaggctgctgggtgaagga
ttcagtgatctgtttcttacagatggaagaattccagcagctatgaggctgtgcacggaa
gagtgcagggtcctgggacactccgaccagtgctggatgccgccgctgccctcaccctcc
tcggattataggagcaacatgttcattcccggggaggaattcccagcacagccccagcag
cagcatccgcatcagagtcttgaggatgacgtgcagcctgtagactctagtgagaagaag
aagagcttttccacgtttgggaaagactccccaagtgaggaggactctggggacaccagc
acgtcctctttgctctcggaaatgagcagcgtgttccagcgcctcttgcccccttctctg
gacacctattctgagtgcagtgagatggaccggtccaactcactggaacgccggaaggga
cctttgccagccaagactgtgggttacccacagggggtggcggcctgggcagccagtacg
cattttcaaaacccgaccaacaactctgggcccccacttgggactcactccagtgtgcag
ccttcttcaaaatggctgccggctatggaggagatccctgagaattacgaagaggatgat
tttgacaatgtgcttaaccacctcaatgacggcaaacatgaactcatggatgccagtgag
ctagtggctgagattaacaaactgcttcaggatgtccgccagagctag
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