Capra hircus (goat): 102188854
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Entry
102188854 CDS
T02910
Symbol
VPS13A
Name
(RefSeq) vacuolar protein sorting-associated protein 13A isoform X2
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
chx
Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
chx04131
]
102188854 (VPS13A)
Membrane trafficking [BR:
chx04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
102188854 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
ATG2_CAD
RRM_fung
Mer2
Motif
Other DBs
NCBI-GeneID:
102188854
NCBI-ProteinID:
XP_005683853
LinkDB
All DBs
Position
8:53017568..53285468
Genome browser
AA seq
3173 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVNLDTSQLSLGIWAGAVALKNLEIKENALSQLDVPFKIKVG
HIGTLNLIIPWKNLYTQPVEAVLEDVYLLIVPSSRIKYDPIKEEKQLFEAKQQELKRIEE
AKRKVADQEKQHVEKQDTFTEKLITQIIKNLQVKISNIHIRYEDDVTNRENPLSFGISLQ
NLSMQTTDQYWIPCLHDETEKLFRKLVRLDNLFAYWNVKSQLFYLSNYDESLSRLRSGIV
DENIVPDGYDFVFRPISANAKLQMNRRSDFDFSAPKIDLDVELHDITIELNKPQYFSFME
LLESVDMMTQNLPYRKFKPDVPLRYHAKEWWAYAILGILEVNIRPHLRMWSWKHIREHRQ
NMKQYKELYKKKLISKKPSGELLNSLEELEKTLDVFNITIVRQQAEVEVKKAGYRIFREG
TEESESNKGWFSWMWNWSESHSKQQLDIKPGSLEEILTPKEKSLLYEAIGYSETAVDPTL
PKTFEAMKFFVHLKSMSIILREQQQKPELLDIVVEEFSTLIVQRPGAQAVKFETKIDSFH
VTGLPDNSTKPRLLSSLDDAGSLLKIMFEINPLDETVAQRCIIEAEPLEMLYDARTVNSI
VEFFRPPKEVNLAQLTSVTLTKLEEFRDKTATGLVYIIETQKVLDLKINLNASYIIIPQD
GIFSPTSNLLLLDLGHLKVTSKIRSELPDLKQGGANREEIMHRAYDSFDIQLTSIQLLFS
RVGDNWKEARKLNVSAQHILVPMHFNVELSKAMVFMDISMPKFKIYGNLPLVSLRISDKK
LQGILELIESIPKPSPAAEVNVPVKSSQVQRSTSFGTSQMSQKKFPLLEIPCVEDDSDEE
YFDAPCSPLEEPLQSPSRIKSPQQKKLQKPDCFKNMIEYKIRFEVPEVLIQFCHLVGDCE
LPVVEINVLGLGTDIELRTFDLKANAFLKEVCLKCPDYFDENKKPIYLVTTLDNTMEDLL
TLEYVKAENNLPATILKNAYNSVVQLIKVNFSSLDIHLHTEALLNTINYFNNILPYLEEK
PAPVHIVETEDKGEVIKKIPLKSSKNEDTITLQILAELSCLQIFIQDQKRNISEIKIEGL
DCEIIMRPSVTETNAKLRNIIVLDSDITAIYKKAVYITGKEVFSFKMVSYMGATAGSAYT
DMNVVDMQVNLTVGCIEVVLVKKFLYSILAFIDNFQAGKQALAEATVQAAEMAATGVKEL
AQRSSRMALDVHIKAPVVVIPQSPVSENVFVADFGLITMKNTFHVITKSPTNPPPIIDLI
TIKLSEMRLYRTQYINDAYREVLDLLLPLNLEVMVERNLSWEWFQEVPCFNVNAQLKPME
FILSQEDITTIFKTLYGNIWYEGDSASHEVTKDQSSITSGATTASHHPAGTTVVTAAVVE
VHSHASQVKTTLNMSFRTDYLTMVLYSPGPKQTSFTDIRDPSLILAEFKLENIISTLKMN
TDDSTFSSFSLKNCILDDKRPHIKKATPRMIGLTVGFDKKDMMDVRYRTIRDGWVADIVL
QEMYICASVEFLLTVANVFLEAYTTGTAVETSVQTWSAKEEVPKQQSEKWEMNITIKNPE
IVFVADMTRNDAPALVITTQCEIYWLGDFENDTMTAAIKDLQVRACPFLPVKRKGKITTV
LQPCDLFCQATQISTDPQVLELSVKSLTLKVSPVIINTVITITSALYTAKETIPKETASS
TAHLWEKKDTKDLNMWFLEEPNEAVKRAPMPELVPKGEIIKMNIDSIFLVLEAGIGHRTV
PMLLAKSRFSGEGKNWSSLINLHCQLELEVHYYNEMFGVWEPLLEPLEIDQTEDFRPWNL
GIKMKKKAKKAIVESGTEEENYRVPEYKTVITFYSKDQLNITLSKCGLVMLNNLAEAFTE
AATGSSATFIRDLAPFMILNSLGLSISVSPSESFSVLNVPMAKSYVLKNEESLSMDYMRT
KDNDHFNAMTSLSSKHFFILLTPANHSTADKIPLTKVGRRLYTVRHRESGVERSIVCQID
AVEGSKKVTVRSPVQIRNHFSIPLSVYGGDTLLGTALPGSEFNIPLASYRSLLSLKPEDA
DYQMCEGIDFEEMIKQDGTSFKKKCRPINPSRKPFIINIVPEKDNLTYMSVYSEDHWDLP
YIIHLWPPILLRNLLPYKIAYYIEGIEHRVFTLHEGRSAQLCTVQLDKARLHLKLLDYLN
HDWKSEYHIKPNQQDISFISFTCVTEIEKTDLDIAVHVTYNTGQTVMAFHSPYWMVNKTG
RMLQYKADGIHRKHPPNYKKPVLFSFQPKHFFNNNKVQLMVTDSELSDQFSIDTVGSHGA
VKCKGPKMEYQVGVTIDLSSFNITRIVTFTPFFLIKNKSKYHISVAEEGNDKWLSVDLEQ
CVPFWPEDASNKLLIQVERSESPPQKIHFNKEESCILLRLDNELGGIIAEVNLAEHSTVI
TFSDYRDGAATFLLINHTRNDIVQYKQSSLSEIEDSLPPGKAVFYTWADPVGSRKLKWEC
GKSHGEVTQKDDMMTPINLGKKTIYLVSFFEGLQRIILFTEDPRVFKVTYESEKAELAEQ
EIVLALQDVGISLVNNYTKQEVAYIGITSSDVVWETKPKKKARWKPMSVKHTEKLEKEFK
EYAESSPSEDKVIELDTNILVRFTPGATNMKILQPHVIAIRRNYLPALKVEYSTSAHQSS
FRIQIYRIQIQNQIHGAIFPFVFYPIKPPKSVTLDSAPKPFTDVSIVMRSAGHSQISRIK
YFKVLIQEMDLRLDLGFVYAVSELMTPAEVTEKTEVELFHKDIESFQEEYKIVSLVDSSQ
VSLYEYFHISPIKLHLSVSLSSGGEEAKDSEQHEGLMAVHSLNLLLKSIGATLTDVQDVV
FKLAFFELNYQFHTTAELQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEA
FFYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITSAMAKGVAAMTMDEDYQ
QKRREAMNKQPAGLREGITRGGKGLVSGFVSGITGIVTKPIKGAQKEGATGFFKGVGKGL
VGAVTRPTGGIIDMASSTFQGIKRATETSDEVESLRPPRFFNEDGVIRPYRLRDGTGNQM
LQVIENGRFAKYKYFTHVMINKTDMLMITKSGVLFVTKGTFGQLTCEWQYSFDEFTKEPF
IVHERRLRIEAKERVKSVFHAKEFGKIVNFRTPEDARWILRKLEEAREPSPNL
NT seq
9522 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgagtcggtggtcgtggacgtgttgaaccggttcttgggggactatgtggtg
aacctggacacgtcccagctcagtctgggcatctgggcaggagctgtggccctgaagaat
cttgaaattaaagaaaatgccctgagtcaactggatgtaccatttaaaattaaagttggc
catataggtactcttaatcttataattccatggaaaaacctttatacccaaccagttgaa
gctgtattagaagatgtttatttactcatagtgccttcttctagaataaaatatgatcct
ataaaggaagaaaaacagctctttgaagcaaagcaacaggaattgaaaagaatagaagaa
gcaaaacgaaaagtagctgatcaagaaaaacagcatgtggagaaacaggatactttcaca
gaaaaattaattacccagatcataaaaaatcttcaagtgaaaatttccaacatccatatt
cgctatgaagatgatgtcacaaatcgagaaaaccctctgtcatttggtatttcccttcag
aatctcagcatgcagacaactgatcaatactggattccatgtttacatgatgaaactgag
aaactatttcgtaagttagtccgattggataacctttttgcctattggaatgtgaagtct
cagctgttttatcttagtaattatgatgaatcattgagcagactgaggagtggcattgtt
gatgaaaatattgttccagacggttatgattttgtatttcgccccatatctgctaatgcc
aaacttcagatgaatcgcagatcggattttgacttttctgcccccaaaatagacctggat
gttgagttacatgacataacaattgaacttaataaaccacagtatttcagttttatggaa
cttcttgaatcggttgatatgatgacacaaaatctaccatacaggaaattcaaacctgat
gtacctcttcgttaccatgccaaagaatggtgggcttatgctatacttggcattcttgaa
gtaaacattcgcccccacttacggatgtggtcctggaagcatattagagaacataggcaa
aatatgaagcaatataaagaactgtataaaaaaaagctaataagtaagaagccatctggt
gaacttcttaactctttggaggagttggaaaagactttggatgtatttaatataactata
gtaagacaacaggccgaagttgaggtaaagaaagctggatacaggattttcagagaagga
acagaagagtcagagagtaataaaggatggtttagctggatgtggaattggtcagaatcg
cacagtaaacagcaactagatattaaacctggaagtcttgaagaaatattgacacctaaa
gaaaaaagtttgctgtatgaagcaattggctatagtgaaacagcagttgatccaacctta
ccaaaaacatttgaagcaatgaagttttttgttcacttgaaaagtatgtctatcattcta
agagaacaacaacaaaaacctgaactgctagatattgtagtggaagaatttagtactttg
attgtgcaaagaccaggagcacaagcagttaaatttgaaaccaaaatagattcatttcat
gttactggcttaccagataactcaacaaaaccccgcctcctgtcttcattagatgatgct
ggatcactcttgaaaattatgtttgagataaatcctttagatgaaactgttgctcagagg
tgtatcatagaagctgaacctttagaaatgttatatgatgcaagaacagtgaatagtata
gtagaattcttcagacctcccaaagaggtaaatctagcacagctgacttcagtaactttg
acaaaacttgaagaatttcgtgataagacagcaacaggtctggtatatattattgaaaca
cagaaagttcttgatctcaaaattaacttgaatgcttcatatatcattatcccacaagat
ggtatctttagccctacgtcaaatctccttcttttggatcttggacatctaaaggtgaca
agtaaaattcgttcagaattaccagatttaaaacaaggtggagccaatcgtgaagagata
atgcatagagcttatgattcctttgatattcagcttacaagcatacagctgcttttcagc
agagttggtgataattggaaagaagcacgaaaactcaatgtgtctgcacagcatatcttg
gtacctatgcacttcaatgtggagctctctaaggccatggttttcatggatataagtatg
cccaaattcaagatttatggaaacttaccattagtttctttacgaatctcagataaaaaa
ctgcaagggattttggaactgattgaaagcattccaaaaccctcacctgcagctgaagta
aatgtgcctgtcaaatcatctcaggttcaaagatccacttctttcggaacatcacagatg
tcacagaagaaatttcctcttttggaaattccatgtgttgaagatgattcagatgaggag
tattttgatgcaccatgtagtccgttggaagagcctcttcaatctccatctagaattaaa
agtcctcaacagaaaaagcttcagaaaccagattgttttaaaaatatgattgagtataaa
ataagatttgaagtgccagaggttttgattcagttctgtcaccttgttggagactgtgaa
ctacctgtggtagaaattaatgtcttaggattgggcacagatattgagcttagaacattt
gatttgaaagcaaatgcctttttgaaagaggtctgcttaaaatgtccagattattttgat
gaaaacaagaaaccaatttatttggtaacaacactggataacacaatggaagacctctta
acactggaatatgtgaaggctgaaaataatttacccgcaacaatactgaagaatgcttat
aacagtgttgtgcaactgataaaggtgaatttttcctctttggatattcatttacatact
gaagcacttctgaatacaataaattattttaataatatccttccatatttggaggagaaa
ccagccccagtacatattgtggagactgaagacaaaggggaggttatcaaaaaaatacct
ttaaaatcatccaagaatgaagatactattaccttgcagattttagcagaattgtcatgt
ttacagatctttattcaagatcagaaacgtaacatttccgaaattaagatagaagggctt
gattgtgaaatcattatgaggccatcagtgactgaaacaaatgcaaagctaaggaatata
attgttctggactctgacataacagctatatacaaaaaggctgtttatattaccggtaaa
gaagttttcagcttcaaaatggtttcttatatgggtgcaactgctggttctgcatacaca
gatatgaatgtagttgatatgcaagttaatttaactgttggttgcattgaagtagttctt
gtcaaaaaatttctgtattctatattggcttttatagataattttcaagcaggtaaacaa
gccttagctgaggcaactgttcaggcagcagaaatggctgctactggtgtaaaagaactg
gcacaaaggagttctagaatggcattggatgttcacatcaaagcccccgttgtggttatc
ccacagtctccagtttctgaaaatgtttttgttgctgattttggactaattacaatgaaa
aatacattccatgtaataacaaagagtccgaccaaccccccacccattattgatttgata
acgataaagctaagtgaaatgcgactatacaggactcaatatattaatgatgcataccgg
gaagtactggatctactattgccattaaatcttgaggtgatggttgagcgaaatttatca
tgggagtggttccaggaagttccttgtttcaatgtaaatgctcagctaaagcccatggag
ttcattcttagtcaagaagatataacgaccatttttaaaacattatatggcaacatatgg
tatgaaggtgatagtgcttcacatgaagtaacaaaagatcagtccagcattactagtggt
gctactactgcttcacaccatccagcaggaacaactgtagtgacagctgctgtggtagaa
gtacattcacatgcttctcaagttaagacaacactaaatatgagttttagaaccgattat
ctcaccatggtactgtacagtccaggtcctaaacagacttcctttacagatattcgtgat
ccttctctgatacttgctgaatttaagttggagaatattataagcactttaaaaatgaat
acagatgactcaacattttcttccttctcattaaaaaactgtattttagatgataaaagg
ccccatatcaagaaggcaactcctagaatgataggactgacagttgggtttgacaaaaag
gacatgatggatgtaaggtataggacaatccgagatggttgggtggctgatatagtcctt
caggaaatgtatatttgtgcaagtgtggaatttctgctgacagttgcaaatgtctttctt
gaggcctacactacaggcactgctgtagaaaccagtgttcaaacatggtctgctaaagaa
gaagtacctaaacagcaatcagaaaagtgggaaatgaatatcactattaaaaatcctgaa
attgtgtttgtcgctgatatgacaagaaatgatgctcctgccttagtcattacaacacag
tgtgaaatatattggctaggtgactttgaaaatgatacaatgactgctgccattaaagat
ctccaagtgagagcatgcccatttcttccagtcaagagaaaaggaaaaatcactactgtt
ttgcaaccctgtgacttgttctgtcaagctactcagataagtacagatccacaagtactt
gaattatcagtaaaatccctgacactgaaggtttcaccagttatcataaatactgtgatt
accataacttcagcactttatactgccaaggaaaccatcccaaaagaaactgcttcttct
acagcacatttatgggaaaagaaggatacaaaagatttaaatatgtggtttcttgaagaa
ccaaatgaagctgtaaaaagagctcccatgcctgaattggtacccaaaggagagataata
aaaatgaacattgattctatttttctagttcttgaggctggaattggtcatagaacagta
cctatgctattggcaaaatcacgtttctcaggggaaggcaaaaactggagctccttaata
aatctccactgtcaacttgagctagaagtacattattacaatgaaatgtttggtgtgtgg
gagcctttgcttgaacccttagaaattgatcagactgaggattttagaccatggaatctt
ggaatcaagatgaaaaagaaagccaaaaaggccattgttgagtcaggcactgaagaagaa
aattacagagtaccagaatataaaactgtcatcactttctattcaaaagaccagctaaac
attacattatctaaatgtggccttgtaatgttaaataatttagctgaggcatttacagaa
gctgccactggatcttccgctaccttcataagggatctggcaccttttatgattttaaat
tctctcggacttagtatttctgtttcaccaagtgaatcttttagtgtactcaacgtacct
atggcaaaatcatatgtattgaaaaatgaggagagtttaagtatggattatatgcgaact
aaagacaatgatcatttcaatgcaatgaccagcctaagcagcaaacacttcttcattctt
cttacacctgctaaccattctactgctgataaaatccctttaacaaaagtgggacgacga
ctgtacactgtaagacacagagagtctggagttgaaagatcaattgtttgtcaaattgat
gcagtggaaggaagtaagaaggtaacagttcgctctccagtgcagattagaaatcatttt
tccataccactttctgtttatggaggagacacattattgggaacggctttacctggaagt
gaatttaacataccattagcatcttaccgatcactactttctctgaagccagaagatgca
gactatcagatgtgtgaaggaattgactttgaagaaatgataaaacaagatggtacttct
ttcaagaagaaatgtagacctataaacccttccaggaagccatttatcattaatatagtc
ccagaaaaagataatttgacatatatgtcagtgtattcagaagaccattgggacttacca
tacataatacatttgtggccacctattctactccgaaatcttcttccttacaaaattgct
tattacatagaggggattgaacatagagtttttactctccatgaaggccgttcagcacag
ctttgtactgtacagttggataaagccaggctacatttaaaattacttgactatcttaat
catgattggaaaagtgaatatcatataaaacctaatcaacaagatattagtttcatcagt
tttacttgtgttacagaaatagaaaagactgatttagatattgctgtccatgtgacttat
aatactgggcagactgttatggcatttcatagtccttattggatggttaataaaactggt
cgaatgttacagtataaagcagatggaattcatcgaaagcatccacctaattataaaaag
ccagttctcttttcatttcagccaaagcactttttcaataacaataaggttcagcttatg
gtaactgatagtgaattgtcagatcaattttcaattgatactgttggtagtcatggagct
gttaaatgtaaaggcccaaaaatggaatatcaagttggtgtcactatagaccttagcagt
tttaacattaccagaattgtcacatttacccccttttttttgattaaaaacaaaagcaaa
tatcatatatcagtggctgaagagggaaatgataaatggctctctgttgatttggagcag
tgtgtccccttttggcctgaggatgcttctaataaacttcttattcaagttgaaagaagt
gaaagccctccacaaaagatacattttaataaggaagaaagttgtattttactgcgtcta
gacaatgagcttggaggtattatagcagaagttaatttggctgagcattctacagttatt
acattttcagattatcgtgatggagccgctacgtttctgttaataaatcacaccaggaat
gacattgttcagtataagcaaagttccctcagtgaaatagaagattccctccctcctgga
aaagcagtattttatacatgggctgatccagtgggctctagaaagctgaagtgggaatgt
ggaaaaagccacggtgaagtaacacaaaaggatgatatgatgacacctataaatttggga
aaaaagaccatttatttagtttcattttttgaaggcttacaacgcataattttattcact
gaagatccaagagtatttaaagtgacatatgaaagtgagaaagcagagttagcagagcaa
gaaattgtgttggcattacaagatgttgggatttctcttgtcaacaattatacaaagcaa
gaagtagcctatattggcattacaagttctgatgtggtttgggagacaaagcccaagaag
aaggcaagatggaagccaatgagtgtaaagcacactgagaagttagagaaggaatttaag
gaatatgctgaatcttcaccatcagaagataaggttattgagttggacactaacattctg
gttcgcttcacacctggtgctactaacatgaaaattctgcagccacatgtaatagctata
agaagaaattatcttccagcattaaaagtagaatatagcacatctgcacatcagtcgtcg
tttagaattcaaatttatagaatacagatccaaaaccaaatacatggtgctatatttcca
tttgtgttttatcccattaaaccgcccaagtccgtcaccttggattcagcaccaaaaccc
tttactgatgtcagtattgtcatgagatctgcaggacattcgcagatatcacgtattaag
tatttcaaagtgttaatccaagaaatggatctcaggttagatcttggatttgtctatgct
gtatcagaacttatgacaccagctgaagtcactgaaaaaacagaggttgagctttttcat
aaagacatagaatctttccaagaagaatataaaatagtctcactagtagattcatcacaa
gtcagtctctatgaatactttcatatatctcctatcaagttgcatttaagtgtttcactg
agttcaggcggtgaagaagcgaaagattcagaacagcatgaaggactgatggcagttcat
tctttaaatcttttgctgaagagtatcggtgccactctcacagatgtacaagatgtagtt
tttaagctagcattttttgaactcaattatcagttccatacaacagctgaactacagtct
gaagtaataagacactattcaaagcaggccattaaacagatgtatgtactcattcttgga
cttgatgttttgggaaatccctttggcttgatacgagaattttctgaaggtgtagaagca
tttttttatgaaccttaccagggagccatccagggtcctgaagagtttgtggaaggaatg
gcactaggactgaaagcactagttggtggagctgttggtggactagctggtgctgcctcc
aaaatcaccagtgctatggctaaaggggtggcagctatgactatggatgaagactaccaa
cagaagagaagagaagccatgaacaagcaaccagctggtcttagagaaggcatcactcgt
ggaggaaaaggcttagtttctggttttgtaagtggcataacaggaattgttacaaaacca
atcaaaggagctcagaaagaaggagcaactggtttctttaaaggtgttgggaaaggttta
gttggagcagtgacaaggccaactggaggcatcatagacatggctagcagtacatttcag
ggaataaaaagagcgacagagacttctgatgaagtggagagtctgcgaccccctaggttc
tttaatgaagatggagttatcagaccttacaggttgagggatggtactggaaatcaaatg
ttacaggtcatcgaaaacggaagatttgcaaaatacaaatattttacccatgtcatgatc
aataagacagacatgttaatgattaccaaaagtggtgtattgtttgtaacaaaaggaaca
tttggacagcttacttgtgagtggcagtatagttttgatgagtttaccaaagagccattc
attgttcatgagagaagactgcgcatcgaagcaaaggaacgggtgaagtctgtattccat
gccaaagagtttggaaaaatagttaacttcagaaccccagaggatgcaaggtggatcctc
agaaagctagaagaagcaagagaaccttccccgaacctctga
DBGET
integrated database retrieval system
