Capra hircus (goat): 102188880
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Entry
102188880 CDS
T02910
Symbol
NUP160
Name
(RefSeq) nuclear pore complex protein Nup160
KO
K14303
nuclear pore complex protein Nup160
Organism
chx
Capra hircus (goat)
Pathway
chx03013
Nucleocytoplasmic transport
chx05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102188880 (NUP160)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102188880 (NUP160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chx03019
]
102188880 (NUP160)
03036 Chromosome and associated proteins [BR:
chx03036
]
102188880 (NUP160)
Messenger RNA biogenesis [BR:
chx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102188880 (NUP160)
Chromosome and associated proteins [BR:
chx03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
102188880 (NUP160)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Nup160_C
Beta-prop_Nup120_160
TPR_NUP160_120_M
NUP160_helical
HEAT_Nup120
TPR_NUP120_160
Motif
Other DBs
NCBI-GeneID:
102188880
NCBI-ProteinID:
XP_017914573
UniProt:
A0A452FJN4
LinkDB
All DBs
Position
15:5423979..5467627
Genome browser
AA seq
1402 aa
AA seq
DB search
MAAAGAVERSFVELVGAERERPRHFREFTVCGIGTANAAAGAVKCSESAGGFYYVESGKL
FSVTRNRFIHWKTSGDTLELVEESLDINLLNNAVRLKFQNCVLLPGGVHVSETQNHVMIL
ILTNQTVHRLVLPHPSRMYRSELAIESQMQSIFTDIGKVDFRDPCNCQLIPSVPGLSPGS
AASAAWLSNDGEALFALPSASGGIFVLKLPPYDVPGVVSIVELKQSSVMQRLLIGWMPTA
IRGDQGPSDRPLSLAVHCVEHNAFIFALCQDHKLRMWSYKDQMCLMVADMLEFVPVNKDL
RLTAGTGHKLRLAYSPSMGLYLGVYLHAPKRGQFCVFQLVSAENNRYSLDHISSLFTSQE
TLIDFALTSTDIWALWHDAENQTAVKYINFEHNVAGQWSPVFMQPLPEEEIIIRDDQDPR
EMYLQSLFTPGRFINAALCKALQIFCRGTERNLDLSWTELKKEVTLAVESELQGSVTEYE
FSQEEFRNLQQEFWCKFYACCLQYQEALSHPLALHLNPHTNMVCLLKKGYLSFLVPSSLV
DHLYLLPDESLLTEDETTISDDVDVARDVMCLIKCLRLIGESVTVDMSVMMEMSCYNLQS
PEKAAEQILEDLITIDVDNVMEDICSKLQEIRNPIHAIGLLIREMDYETEVEMEKGFNPA
QPLNIRVNLSQLYGSSTSGHIVCRSVCKIASTRFLICRDLLILQQLLMRLGDAVILGAGQ
LFQAQQDLLHRTAPLLLSYYLIKWGSQCLATDVPVDTLESNLQHLSVLELTDSGALTTNK
FVSSPQTIVELFFQEGARKHIISHLFSQPKAPLSQTGLNWPEMITAVTNYLLQLLWPSNP
GCLFLECLMGNCQYVQLQDYIQLLHPWCQVNVGSCRFMLGRCYLVTGEGQKALECFCQAA
SEVGKEEFLDRLIRSEDGEIVSTPRLQYYDKVLRLLDVVGLPELVIQLATSAITEAGDDW
KSQATLRTCIFKHHLDLGHNSQAYEALTQIPDSSRQLDCLRQLVVVLCERSQLQDLVEFP
YVNLHNEVVGIIESRARAVDLMTHNYYELLYAFHIYRHNYRKAGTVMFEYGMRLGREVRT
IRGLEKQGNCYLAAINCLRLIRPEYAWIVQPASGAVYDRPGASPKRNHDGECTAAPTTRQ
IEILELEDLEKECSLARIRLALAQHDPSAAAVAGSSSAEETVTLLVQAGLFDTAVSLCQT
FKLPLTPVFEGLAFKCIKLQFGGEAAQAEAWAWLAANQLSSVITTKESSATDEAWRLLSA
YLERYKVQNNLYHHCVINKLLSHGVPLPNWLINSYKKVDAAELLRLYLNYDLLEEAVELV
SEYVDAVLGKGHQYFGIEFPLSATAPAVWLPYSAIDQLLQALGENTANSHSIALSQKILD
KLEDYQQKVDKATRDLLYRRNL
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgggagccgtggaacgtagcttcgtggagctcgtcggggctgagcgcgaa
aggcccaggcactttcgggagttcaccgtctgcggcattggaactgcaaatgcagcggcc
ggagccgtgaaatgcagtgagagcgcgggaggcttctactatgtggaaagtggcaagttg
ttctccgtcaccagaaacagattcattcactggaaaacctctggagatacattggagctg
gtggaagagtcactggacataaatctgttgaataatgcagttcgcctcaaattccaaaac
tgcgtccttctacccggaggagttcacgtctctgagactcagaatcatgtgatgatcttg
atattaaccaatcagaccgtgcatagattggttttaccacacccttcccggatgtatagg
agtgagttggcaatcgaaagtcagatgcagtctatattcactgacattggaaaagttgat
tttagggatccttgcaactgtcagttgatcccatcagtgcctggcctctcccctggttct
gccgcctcagcagcctggctgagcaatgatggggaggctctgtttgctctgccatctgcc
tctggggggatctttgttcttaaactacctccttatgacgtacctggggtggtgtcaatc
gtggagctgaaacaaagttcagtgatgcagcgcctgctcataggctggatgcccacagct
atcagaggggaccaggggccttcagatcgtcccctgagccttgctgtgcattgtgtcgag
cacaatgccttcatctttgctctgtgtcaagatcataaactacgaatgtggtcttacaag
gaccaaatgtgcctgatggtggctgacatgctggagtttgtccccgtaaataaagatctc
cggctcactgctgggactggacacaaactgcgacttgcttattccccttccatgggactc
tacctgggagtatacctgcacgcaccaaagcgaggacagttctgcgttttccagttggtg
agcgctgagaataaccgctatagcctagatcacatctcctcactgttcacttctcaggag
acactgattgactttgccttaacctctacggatatctgggccctgtggcacgatgccgag
aaccagacggctgtgaaatacatcaactttgaacataatgttgcaggtcagtggagtcca
gtttttatgcagcctctgccagaggaagaaatcatcatcagagatgatcaagaccccaga
gagatgtatctgcagagtctttttacaccagggcgattcattaatgcagctttatgtaaa
gctttacagattttctgtcgaggaactgagaggaatttagacctttcctggacggaacta
aagaaagaagttactttagctgttgaaagtgagctccaaggaagtgtaacagagtatgaa
ttttcccaggaagaattccgaaatttacagcaggaattctggtgcaagttctatgcctgc
tgtcttcagtatcaagaagccctttctcatcctcttgccctgcatttgaatccacacaca
aacatggtgtgcctgttgaagaaagggtacctgtctttccttgtgccttcctccttagtg
gatcatttatatctcctccctgatgagagtcttttgacagaggatgagacaaccatatct
gatgatgtggatgttgctcgggatgtcatgtgtcttataaaatgcctccggctgattgga
gagtcagtaactgtggatatgtcagtaatgatggaaatgagctgttacaacctacagtct
ccagaaaaggctgcagaacagattctggaagatttgatcactattgatgtagacaatgtg
atggaggatatctgtagtaagctgcaggagattaggaacccaatccatgccattggactt
ctaatacgggagatggattatgaaacggaagtagaaatggaaaagggattcaatccagct
cagcctttgaatattcgagtgaatctttctcagctctacggtagtagcacatcggggcat
atcgtgtgccgaagtgtgtgtaaaattgccagcacgcgcttcctcatctgccgagacctt
ttgatcttacagcagctactaatgaggctaggagatgctgtaatcttgggagctggccag
ctctttcaagcccagcaagacctactgcatcgaacagctcccctgctcttatcttattac
ctcattaagtggggaagtcagtgcttggcaactgatgttccagttgacaccttggagtct
aatcttcaacatttatcagtactggaactaactgactctggtgctttaacgacaaataag
tttgtatctagccctcagacaattgtggaattattcttccaagaaggtgcaagaaaacac
attatatctcatctgttctctcaaccaaaggcgcctctaagccaaactggattgaactgg
ccagagatgatcactgcagttaccaattatttattgcagctcttatggcctagcaatcct
ggttgtctctttctagaatgtttgatgggaaattgtcagtatgtacaattgcaggattat
attcagttgctgcatccctggtgtcaagtcaacgttggttcctgccgatttatgctggga
cggtgttacctggttacgggagagggacagaaggctctggagtgtttctgccaggcagca
tccgaagtgggcaaagaggaattcttagatcgcttgatccgttcagaggatggagagatt
gtgtccaccccccggctgcaatattatgacaaggtcttgcgtctgctggatgtcgtaggt
ttgcctgaactggttattcagttggccacgtcagcaataactgaagcaggtgatgactgg
aagagccaggccaccttaaggacgtgcatcttcaaacatcatttggatttagggcacaat
agccaagcctatgaagcgttgacccaaattcctgattccagcaggcagttggattgtctg
cggcagctggtggtagttctttgtgaacgttcccaacttcaggatctcgtggagtttccc
tatgtgaatctgcataatgaggtggtgggaataattgaatcacgggcaagagctgtggac
cttatgactcacaattactatgagcttctgtatgcctttcacatctatcgtcacaattac
cggaaggctggcacagtgatgtttgagtatggaatgcgtcttggcagagaggttcgaact
atccggggacttgagaagcaaggcaactgttatctggctgctattaattgcttacgactt
attcgcccagaatacgcgtggattgttcagccagcatctggtgcagtgtatgatcgccct
ggagcatcccctaaaaggaatcatgatggagaatgcacagctgccccaacgactagacag
attgaaatcctggaactggaggatctggagaaggagtgctccttggcccgcattcgcctc
gccctggctcagcacgacccctcggcggccgctgtcgcaggaagttcatccgcagaggag
acggtcactctcttggttcaggctggccttttcgacactgctgtatcactgtgccagact
ttcaagcttcccttaacgccagtctttgaaggacttgctttcaaatgcatcaaattgcag
tttggaggagaggcagcgcaagcagaagcctgggcctggctagcagccaaccagctttcg
tcagtcatcaccactaaagagtctagtgctacagatgaagcctggcggctattatcagct
tacctggaaaggtacaaagtccagaataacttatatcaccactgtgtaataaacaagctc
ttatctcatggagttcctctgcctaactggctaataaacagttacaagaaagttgatgca
gctgagttgctccgtctgtacttaaactatgaccttttagaagaagctgtggagttggtt
tcagaatatgtggacgctgtactgggaaaaggacatcagtactttgggattgagttcccg
ctgtccgccacggctccagcggtgtggctgccgtactccgccatcgatcagctcctccag
gctctgggagagaacactgccaacagtcacagcatcgcgctgtcccagaaaatacttgac
aaattggaggactaccagcaaaaagttgataaggcaacacgggatttgttgtatcgtcgg
aacttgtga
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