Capra hircus (goat): 102188918
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Entry
102188918 CDS
T02910
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1 isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
chx
Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chx03016
]
102188918 (TRUB1)
Enzymes [BR:
chx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
102188918 (TRUB1)
Transfer RNA biogenesis [BR:
chx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
102188918 (TRUB1)
Prokaryotic type
102188918 (TRUB1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
102188918
NCBI-ProteinID:
XP_017897144
UniProt:
A0A452FGD3
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All DBs
Position
26:complement(16554484..16586666)
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AA seq
351 aa
AA seq
DB search
MAAAEAAAVVLSSCLKPVPAPVPESAGTAAATAATFSAMAAAAAVAAAARTGSEARVSKP
ALATKLLSLSGVFAVHKPKGPTSAELLNRLKEKLLAEAGMPSPEWTKRKKQTLKIGHGGT
LDSAARGVLVVGIGRGTKMLTSMLSGSKRYIAIGELGKATDTLDSTGKVTEEKPYDKITQ
EDIESILQKFTGNIMQVPPLYSALKKDGQRLSALMKRGEEVEAKPARPVTVYSLSLQKFQ
PPFFTLDVECGGGFYIRSLVSDIGKELSSCANVLELTRTKQGPFTLEEHALPEDKWTIDD
IAQSLERCSSLFPAELALKKSKPEESNEQVLSCEYITLNETKGEDDVIKTL
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgctgaggcggcggcggtggtgttgtcgtcctgtttgaaaccagtcccagcc
ccagtccccgaaagtgcagggacagctgcagcaacggccgccacattctcagcgatggct
gcagccgcggcggttgcggccgcggccaggaccggatccgaagccagggtctcgaagccc
gcgttggctactaagctgctgtccctgagcggcgtgttcgctgtgcacaagcccaaaggg
cccacttcagccgagttgctgaatcggctgaaggagaagctgctggcagaagctggaatg
ccttctccagaatggaccaagaggaaaaagcagactttgaaaattgggcatggagggacc
ctagacagtgcagcccgaggagtcctggtggttggaattggaaggggaacaaaaatgttg
accagtatgttatcagggtccaagagatatattgccattggggaactggggaaagctact
gacacgctagattctacagggaaagtaacagaagaaaaaccttatgataaaataacacaa
gaagatattgaaagcattctacagaaattcactgggaatataatgcaagtacctcccctc
tattctgcattgaagaaagatggccagaggctttcagctttgatgaagagaggtgaagaa
gtggaagcaaagcccgccaggccagttactgtatacagtctctcccttcagaaattccag
ccaccatttttcacactagatgtcgaatgtggaggaggtttttatatcagaagcttggtc
agtgacattggcaaagaactctcttcctgtgccaatgtgctagagctgacgcgaaccaag
cagggaccattcaccctggaggagcatgccctgcccgaggacaagtggacgattgatgac
attgcacagtctctcgagcggtgctcatctcttttcccagcagagctggcacttaaaaaa
tcaaaacctgaggagtctaatgagcaagttttgagctgtgagtatataactctgaatgag
acaaagggagaagacgatgtaattaagacactttaa
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