Capra hircus (goat): 102188972
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Entry
102188972 CDS
T02910
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
chx
Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chx03021
]
102188972 (SUPT6H)
03036 Chromosome and associated proteins [BR:
chx03036
]
102188972 (SUPT6H)
Transcription machinery [BR:
chx03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
102188972 (SUPT6H)
Chromosome and associated proteins [BR:
chx03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
102188972 (SUPT6H)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
102188972
NCBI-ProteinID:
XP_005693317
UniProt:
A0A452G172
LinkDB
All DBs
Position
19:19928729..19959291
Genome browser
AA seq
1726 aa
AA seq
DB search
MSDFVESEAEESEEEYNDDGEVVPRVNKKFVEEEDDDEEEEEENLDDQDEQGNLKGFIND
DDDEEEGEEDEGSDSGDSEDEVSHKKRKRTSFDDRLEDDDFDLIEENLGVKVKRGQKYRR
VKKVSDDEDDEEEEYGKEEHEKEAIAEEIFQDGEGEEGQEAVEAHMAPPEEEEEDDEESD
IDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEY
EYEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQL
RSIPVKGAEDDELEEEADWIYRNAFATPTISLQESCDYLDRGQPTSSFSRKGPSTIQKIK
EALGFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLRIRKENLTRLFEKM
QAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQN
AAKASRKKLKRVREEGDEEGDGEEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREP
LVRQVLRQTFQERAKLNISPTKKGRKDVDEAHYAYSFKYLKNKPVKELRDDQFLKICLAE
DEGLLTIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTLAIERALQQF
LYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPYRPDQQVEEDDDFMDENQGKGIR
VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFL
LNKKPHVVTVAGENRDAQMLIEDVKRIVHELDQGQQLSSIGVELIDNELAILYMNSKKSE
AEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLSALYC
EFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTM
CHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTA
YRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVG
MTVHCRIMKIDIEKFSADLTCRTSDLMDRSNEWKLPKDTYYDFDAEAADHKQEEDMKRKQ
QRTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQH
VDVREEGKENAFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDR
KKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQV
FPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMT
SQMFNAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQPVATPLMTPS
YSYTTPSQPITTPQYHQLQASTTPQSAQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQ
WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttgtggaaagcgaggccgaggagtccgaggaagagtacaatgatgacggc
gaggtggtgccccgggtcaacaagaaatttgtagaagaggaggatgacgatgaggaggag
gaggaggaaaacctggatgatcaggatgaacaaggaaacctgaaaggctttatcaatgat
gatgacgatgaagaggaaggggaggaggatgagggtagtgactccggagattcggaagat
gaagttagccacaagaagagaaaacgcacatcttttgatgaccgcctggaggatgatgat
tttgatctcattgaggagaatttgggtgtcaaagtcaaaagaggacaaaaataccgacgt
gtcaaaaaagtctcagatgatgaggacgacgaggaggaggaatatggcaaggaggaacat
gagaaagaagctatcgcagaggagatctttcaggatggggaaggggaagaagggcaggag
gccgtggaggcccacatggctcctccagaagaggaggaggaagatgatgaagagtcagac
attgatgactttatcgtggacgatgatggacaacctctgaaaaaacctaagtggcggaaa
aagcttcctggatacactgatgcggctctgcaggaagcccaggagatttttggtgtggac
tttgactacgatgaatttgagaaatacaatgagtacgacgaagagctggaggaagagtat
gagtatgaggacgatgaggctgagggtgagatccgagtgcgccccaagaagaccaccaag
aaacgtgtgagccgcaggagcatcttcgagatgtatgagcccagtgagctggaaagcagc
cacctcaccgatcaggacaatgaaatccgagccactgacttgcctgagaggttccagctc
cgttccatccccgtcaagggggctgaagatgacgaactggaagaagaggcggactggatc
tacaggaatgcctttgccacaccaactatttctctgcaggaaagctgtgattacctagac
cgagggcagccaaccagcagcttcagtcgaaaagggcccagcacaattcagaagattaaa
gaggccctgggcttcatgcgaaatcagcattttgaggtgcctttcattgctttctaccgg
aaggagtacgtggaacctgagttgcatatcaacgacctgtggagggtgtggcagtgggat
gaaaagtggacccagctgaggattcgtaaggagaacctaacacggctgtttgagaagatg
caggcttatcagtacgagcaaatctctgctgatcctgacaagccccttgctgatggcatc
cgggctctggacaccacggacatggagaggctcaaggatgttcagtcaatggatgaactg
aaagatgtctacaatcatttcctgctctattatggtcgtgacatccctaagatgcagaat
gctgccaaggccagccgcaagaagctaaagcgtgtaagggaagagggagatgaggaaggt
gatggtgaggaggcagaagatgaagagcagagagggccagagctcaagcaggcttctcgc
cgagacatgtacaccatctgccagagtgccgggctagatggcctggccaaaaagtttggg
cttactcctgagcaatttggggaaaacctccgggacagctaccagcggcatgagacagag
cagtttccagcagagcccttggagctggcgaaggattatgtttgcagccagttccctacc
ccggaagccgtgctggaaggtgcccgctacatggtagccctgcagattgccagagagccc
ctcgtccggcaggtgctgagacagactttccaggagagggccaagctcaatataagcccc
actaagaaaggaagaaaggatgtggatgaggcccactatgcttactccttcaagtactta
aagaacaagcctgttaaggaactgagagatgaccagttcctcaagatctgcctggctgaa
gatgaagggctgctcaccattgatatcagcatcgatatgaagggagtggaaggctatggc
agtgaccagacatattttgaagaaatcaaacaattttactaccgagatgagttcagccat
caggtgcaggagtggaaccggcagcgcaccctggccatcgagcgagctctccagcaattc
ctgtatgtgcagatggccaaagagctcaagaacaagctgctggccgaagccaaagaatac
gtcataaaggcctgtagtagaaagctctacaactggttgagggtggcgccctaccggcca
gatcaacaagtagaagaagacgacgactttatggatgagaaccaagggaagggcatccgg
gtcctaggcattgctttctcctctgccagagatcaccctgtgttctgcgccttggtcaat
ggtgaaggagaagtgacagacttcctccgtctgcctcattttaccaagcggcgaactgca
tggagagaggaagagcgagagaagaaggctcaagacattgaaactctgaagaaattcctt
ttgaacaaaaagcctcacgtggtgacagttgcaggagagaacagggatgcccagatgttg
attgaggatgtgaagcgcatcgtgcatgagctggaccagggtcagcagctgtcctctatt
ggggtggagctgattgacaacgagttggccatcctctatatgaacagcaagaaatcagag
gcagagttccgggattaccctcctgtgctgagacaggccgtctccctggcccgacgtatc
caggaccctctgattgagtttgcccaggtgtgcagctcggatgaagacatcctgtgcctc
aagtttcacccgttgcaggagcatgtggtgaaagaagagctgctcagcgccctgtactgt
gaattcatcaaccgagtcaatgaggttggagttgatgtcaaccgtgccattgcccacccc
tacagccaggccttgattcagtatgtttgtggcctaggacctcgaaaagggacccatctc
ctgaagattctgaaacagaacaacaccaggctcgagagccggactcagctggtcaccatg
tgccacatgggtcccaaagtcttcatgaattgcgctggcttcctcaagattgacactgcc
tccctgggggacagcactgactcatatattgaagtccttgatggttcccgagttcaccct
gagacttatgagtgggccaggaagatggcggtggatgctctggaatatgatgaatcagct
gaggatgccaaccctgcgggagcccttgaagaaatcttggaaaacccagagcgactcaag
gacctagaccttgatgcctttgcagaagaactggagaggcagggctatggtgacaaacac
atcacgctgtacgacatccgagcggagctgagctgtcggtataaggacctccggacagcc
taccgctctcccaacacagaggaaatcttcaatatgttaaccaaagagacaccggagacc
ttctacattggaaagctcattatttgcaacgtcaccggcatcgcccataggcgtccacag
ggcgaaagttatgaccaggcaatccgcaacgatgagacggggctgtggcagtgccctttc
tgtcagcaagacaatttcccggaactaagtgaggtctggaaccactttgacagcggttca
tgcccaggccaggccatcggtgtcaaaacacggctagacaatggtgtcactggcttcatc
cccaccaaattcctcagtgacaaagtggtaaagcggccagaggaacgagtgaaggtgggg
atgactgtccactgccgcatcatgaagattgacatcgagaagttcagtgcggacctgacc
tgccgcacctcggacctcatggacaggagcaacgagtggaagctgcccaaggacacctac
tatgactttgacgccgaagcagcagaccacaagcaggaggaggacatgaagcggaagcag
cagcggaccacgtatatcaagcgagtgattgcacacccatccttccataatataaatttt
aagcaagcagaaaaaatgatggaaaccatggaccagggtgacgtgatcatccgaccgagc
agcaagggcgagaatcacctgacagtgacctggaaggtcagcgacggcatctaccagcac
gtggatgtgcgggaagaaggcaaggaaaatgccttcagcctgggagccaccctgtggatc
aacagtgaggagtttgaagacttggatgagattgttgcccgctatgttcagcctatggca
tcctttgcccgggaccttctaaaccacaagtattatcaggactgcagcggtggggaccgt
aagaaattagaggagctgctcatcaaaactaagaaggagaagcccaccttcattccctat
ttcatctgtgcctgcaaggaactgcccggcaagttcctactgggataccagccccggggt
aaacccaggatagaatacgtaactgtgactccagaaggattccggtaccggggccaagtc
tttcccactgtgaacggccttttcagatggtttaaggaccactatcaggatcctgtgcca
ggcatcacccccagtagcagcagcaggacccgaacacctgcttctatcaatgccacccca
gccaacatcaaccttgcagatctgacgcgggctgtgaacgccctgccccagaacatgacc
tcgcagatgttcaacgccattgctgctgtgaccggccagggccagaaccctaatgccacc
ccagcgcagtgggcctccagccagtatggctacggcggcagtggagggggcagcagcgct
taccacgtattcccaacaccagcccagcagccagtggccacaccactaatgacccccagc
tactcctacacaacgcccagccaacccatcaccacgccacagtaccaccagctgcaggcc
agcaccaccccacagtctgcccaggcccagccccagccctcctccagctcccggcaacgg
cagcagcagccaaagtccaacagccatgcagccatcgactggggcaagatggcagaacag
tggctgcaggagaaggaggcggagcggcggaaacagaagcagcggctgacccctcggccc
tcccccagccctatgatcgaaagcacccccatgtctattgctggcgatgccaccccactc
ctggacgagatggaccggtag
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integrated database retrieval system
