Capra hircus (goat): 102189606
Help
Entry
102189606 CDS
T02910
Symbol
CSTF3
Name
(RefSeq) cleavage stimulation factor subunit 3 isoform X1
KO
K14408
cleavage stimulation factor subunit 3
Organism
chx
Capra hircus (goat)
Pathway
chx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102189606 (CSTF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chx03019
]
102189606 (CSTF3)
Messenger RNA biogenesis [BR:
chx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
102189606 (CSTF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
102189606
NCBI-ProteinID:
XP_005690120
LinkDB
All DBs
Position
15:19138556..19207073
Genome browser
AA seq
717 aa
AA seq
DB search
MSGDGATEQAAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQ
FPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQY
LEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVH
SIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDTRTRHHVYVTAALMEY
YCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEK
SGEIWARFLAFESNIGDLASILKVEKRRFTAFKEEYEGKETALLVDRYKFMDLYPCSASE
LKALGYKDVSRAKLAAIIPDPVVAPSIVPVLKDEVDRKPEYPKPDTQQMIPFQPRHLAPP
GLHPVPGGVFPVPPAAVVLMKLLPPPICFQGPFVQVDELMEIFRRCKIPNTVEEAVRIIT
GGAPELAVEGNGPVESNAVLTKAVKRPNEDSDEDEEKGAVVPPVHDIYRARQQKRIR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggagacggagccacggagcaggcagctgagtatgtcccagagaaggtgaagaaa
gccgaaaagaaattagaagagaatccttatgaccttgacgcttggagcattctcattcga
gaggcacagaatcaacctatagacaaagcacggaagacttatgaacgccttgttgcccag
ttccccagttctggcagattctggaaactgtacattgaagcagagattaaagctaaaaat
tatgacaaggtagaaaagctatttcagagatgccttatgaaggttttgcacattgattta
tggaagtgttatctttcatatgtccgagaaaccaagggtaaactaccaagttacaaagaa
aagatggctcaagcatatgactttgcactggataaaattggaatggaaattatgtcttac
cagatttgggtggattacatcaacttcttaaaaggcgtggaagctgttggatcttatgca
gaaaatcagagaataacagctgttcgaagagtttatcaacgaggttgtgttaatccaatg
atcaacattgaacaactgtggagagactataacaagtatgaagagggtatcaatattcat
ttagctaaaaaaatgattgaagatcggagtagagattacatgaatgctaggcgggtagca
aaggaatatgagacagtaatgaaaggtttggaccgcaatgctccctcagtgcctcctcaa
aatactcctcaagaagctcagcaggtggatatgtggaagaagtacatacagtgggaaaag
agcaaccctcttcgtacagaagatcagaccctgataactaaaagagttatgtttgcttat
gaacagtgcctgctggtactgggccatcaccctgatatttggtatgaagctgcccaatat
cttgagcaatcaagtaaactcttagcagagaagggggatatgaataatgccaaattattt
agtgatgaagctgctaatatatatgaaagagccataagcactttattaaagaagaatatg
cttctttattttgcatatgcagattatgaagagagtcgcatgaagtatgagaaagttcac
agtatatataacagacttctggcaattgaggatattgatcccaccttggtatatatccaa
tatatgaaatttgcaagaagagctgaagggatcaaatctggaagaatgatatttaaaaaa
gcaagagaagataccagaacccgccaccatgtctatgttactgcagcactcatggaatat
tactgtagtaaggacaaatctgttgcctttaagatttttgagctggggctaaagaaatat
ggagacattccagaatatgtcctggcctatattgactatctttctcacctcaatgaggac
aataatactcgagttttgtttgaacgagttttaacatctggaagtcttcctcctgagaaa
tctggagaaatctgggcccgatttctagcttttgaaagtaatattggtgatctagctagt
atactgaaagtggagaaaagacggtttacagcattcaaagaagagtatgaaggcaaagaa
acagctttactggtagacagatacaagttcatggatttatatccttgctctgcaagtgaa
ctaaaagcacttgggtataaggatgtctcccgtgctaagctagcagctataattccagac
ccagttgtagctccttctatagtgcctgttctgaaagatgaagtggatagaaaaccagaa
taccctaaaccagacactcagcagatgattccatttcagccacgacatttagcacctcca
ggcttacaccctgtccctggtggagtgttcccagtgccacctgcagcagttgttttaatg
aaacttctccctcctcctatttgtttccagggtccttttgtacaagtggatgaactaatg
gaaattttccgaagatgcaagataccaaatacagttgaagaagctgtgaggatcattact
ggaggagccccagagctagctgtggaaggcaatggcccagtggaaagtaatgcagtgctc
acgaaggctgtcaaaaggcccaacgaggattcagatgaagatgaggaaaagggagctgtg
gttccccccgtccatgacatttacagagcaaggcagcagaagcgaattcggtga
DBGET
integrated database retrieval system
