Capra hircus (goat): 102189872
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Entry
102189872 CDS
T02910
Symbol
TIA1
Name
(RefSeq) nucleolysin TIA-1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
chx
Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chx03019
]
102189872 (TIA1)
03041 Spliceosome [BR:
chx03041
]
102189872 (TIA1)
Messenger RNA biogenesis [BR:
chx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
102189872 (TIA1)
Spliceosome [BR:
chx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
102189872 (TIA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
RRM_3
Nup35_RRM_2
Calcipressin
XOO_2897-deam
Motif
Other DBs
NCBI-GeneID:
102189872
NCBI-ProteinID:
XP_017910954
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All DBs
Position
11:complement(68246797..68279034)
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AA seq
386 aa
AA seq
DB search
MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAA
AALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTE
DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN
WATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQI
MEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQI
GYPQAYGQWGQWYGNAQQIGQYMPNGWQVPAYGMYGQPWNQQGFNQTQSSPPWMGPNYGV
QPPPGQNGSMMPNQPAGYRVAGYETQ
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaaatgcctaagactctatatgttggtaacctttccagagatgtcacagaa
gctctaattctccagctctttagccagattggaccgtgtaaaaactgcaaaatgattatg
gatacagctggaaatgatccatattgttttgtggagttttatgagcatcgtcatgcagct
gcagcgctagctgctatgaatgggcggaagataatgggtaaggaagtcaaagtgaattgg
gcaacaactcccagcagtcaaaagaaagacacaagcagtagtaccgttgtcagcacacag
cgttcacaagatcatttccatgtctttgttggtgatctcagtccagaaattacaactgaa
gatataaaagctgcttttgcaccatttggaagaatatcagatgcccgagtggtaaaagac
atggcgacaggaaagtctaagggatatggctttgtctcctttttcaacaaatgggatgct
gaaaacgccattcaacagatgggtggccagtggcttggtggaagacaaatcagaactaac
tgggcaacccgaaagcctccagctccaaagagtacatatgagtcaaacaccaaacagcta
tcatatgatgaggtcgtaaatcagtctagtccaagcaactgtactgtgtactgtggaggc
gtcacttctgggctaacagaacaactaatgcgtcagactttttcaccatttggacaaata
atggaaattcgagtctttccagataaaggatattcttttgttcggttcaattcccatgaa
agtgcagcacatgcaattgtttctgttaatggaactaccattgaaggccatgttgtaaaa
tgctactggggcaaagaaactcttgatatgataaatcctgtgcaacagcagaatcaaatt
ggatatccacaagcttatggccagtggggccagtggtatgggaatgcacaacaaattggc
cagtatatgcctaatggttggcaagtacctgcatatggaatgtatggccagccgtggaac
cagcaaggatttaatcagacacagtcttctccaccatggatgggaccaaattatggagtg
cagccacctccaggacagaatggcagcatgatgcctaatcagcctgcagggtatcgagtg
gcagggtatgaaacccagtga
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