KEGG   Capra hircus (goat): 102190083
Entry
102190083         CDS       T02910                                 
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain
  KO
K06237  collagen type IV alpha
Organism
chx  Capra hircus (goat)
Pathway
chx04151  PI3K-Akt signaling pathway
chx04510  Focal adhesion
chx04512  ECM-receptor interaction
chx04820  Cytoskeleton in muscle cells
chx04926  Relaxin signaling pathway
chx04933  AGE-RAGE signaling pathway in diabetic complications
chx04974  Protein digestion and absorption
chx05146  Amoebiasis
chx05165  Human papillomavirus infection
chx05200  Pathways in cancer
chx05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:chx00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    102190083 (COL4A4)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102190083 (COL4A4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102190083 (COL4A4)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102190083 (COL4A4)
 09150 Organismal Systems
  09152 Endocrine system
   04926 Relaxin signaling pathway
    102190083 (COL4A4)
  09154 Digestive system
   04974 Protein digestion and absorption
    102190083 (COL4A4)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    102190083 (COL4A4)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    102190083 (COL4A4)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    102190083 (COL4A4)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    102190083 (COL4A4)
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    102190083 (COL4A4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:chx04147]
    102190083 (COL4A4)
   00536 Glycosaminoglycan binding proteins [BR:chx00536]
    102190083 (COL4A4)
Exosome [BR:chx04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   102190083 (COL4A4)
Glycosaminoglycan binding proteins [BR:chx00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   102190083 (COL4A4)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 102190083
NCBI-ProteinID: XP_017914338
LinkDB
Position
2:20407279..20553616
AA seq 1689 aa
MALVRRSFRCNKLLATDSWSLILILFSVQYAYGGGKKFIGLCGGRDCSLCQCFPEKGSRG
QPGPPGPQGPIGPLGPPGPIGIPGEKGMKGDSGRPGAAGDKGDKGPTGVPGFPGLDGIPG
HPGPPGSRGRPGIDGYNGSRGDPGIPGERGALGPRGPPGLPGEKGEKGNSVFILGATKGM
QGDRGDPGPPGSPGSRGVRGPAGPAGYPGEPGLAGPPGPPGSPGLKGNPGVGVKGQMGDP
GEVGQQGSPGPTLLVQPPDSGLYKGEKGIKGLPGMTGPPGPPGAKGKPGIGRKGEKGIPG
FPGPRGDPGSYGSPGFPGLKGEPGLFGDPGSFGFLGPKGDPGDRGHPGPPGVLVTPSLPL
KGPPGDPGRPGHYGETGAVGPRGPPGAPGRPGEACAGMTGPPGPRGFPGHPGFPGAAGVP
GRADSAPGKPGNQGPTGLPGVPGLPGPPGSDVVYCTLGQPGPQGIKGKVGPPGRRGSKGE
KGSSGLCACQPGPMGPPGPPGPPGRQGSKGDLGLPGWLGEKGSPGPPGAKGSPGPPGKPG
ASGLPGNKGEKGDMVVSRVKGHKGERGPDGPPGLPGQQGQHGRDGYAGEKGDPGLPGDHE
DAAPGDKGPPGPPGPPGRAGPRGPPGLGFPGPPGERGQPGAPGWPGNRGPDGRKGQKGDT
IPCNVTYPGRPGPPGFDGPPGPKGLPGHRGAPGLRCLDGQKGQRGKPGISERPGPPGFRG
DTGEPGLGGEKGSSPVGPPGAPGSPGVTGQKGPPGDPAIGYPGLPGKSGLPGAPGSKGLR
GDAGHPGTAGPAGMPGFPGLQGPKGREGSAGFPGIPGPPGHSCERGAPGIPGQPGLPGAP
GSPGAPGWKGQRGDMGPLGPAGMKGLPGVPGRPGADGTPGFPGVPGPTGDDGLPGLPGPK
GPQGLPGFLGFPGERGKPGQDGHPGRKGEHGEKGWPGSLGDQGLKGVKGARGPLGYEGEM
DIISKKGETGEPGPSGDGGFPGENGDKGHPGMQGRRGEPGSYGPPGFHPGEPGRNGQPGL
PGPLGPPGSPGLRGIIGFPGFPGDQGEPGSPGCPGPSGIDGTRGPKGYKGESASQFGLPG
PKGEPGSPGYPGQLGASGEQGLPGAQGPGGPPGRPGPPGFSGPTGCPGNPGGPGLQGPPG
EVGDPGPRGIVGDPGAPGLPGIKGPSGSPGLNGLHGLKGQKGSKGASGSHEMGPPGPVGI
PGPKGEAGDPGNPGISPPGPFGERGPPGPPGPPGRAGSPGPPGAPGKALKGDIPDPGLPG
DQGPPGPDGPRGVPGPPGPPGSVDLLKGEPGDCGLPGPPGLPGPPGPPGHKGFPGCDGKH
GQKGPMGFPGPQGPPGSPGPPGDKGLPGPPGRRGPLGPPGSRGEPGPPADLDACPRIPGL
PGVPGPRGPEGTMGLPGMRGPPGPGCKGEPGLDGRRGEDGLPGSPGPPGHKGDMGEAGCP
GAPGPPGPIGDPGPIGFGPGYLSGFLLVLHSQTDGEPTCPMGMPRLWTGYSLLYLEGQEK
AHNQDLGLAGSCLPIFSTLPFAYCNIHQVCHYARRNDRSYWLASTAPLPMTPLSEDEIRP
YISRCAVCEAPAQAVAVHSQDQSIPPCPRAWRSLWIGYSFLMHTGAGDQGGGQALMSPGS
CLEDFRAAPFLECQGRQGTCHFFANKYSFWLTTVRPDLQFSSAPLPDTLKESHTQRQKVS
RCQVCVKHS
NT seq 5070 nt   +upstreamnt  +downstreamnt
atggcattggtaaggcgttctttcaggtgcaacaagctcttggccaccgattcctggtca
ctcatacttattctcttttctgtacaatatgcatatgggggtggaaagaagtttattggt
ctctgtggaggaagagattgctctctttgccagtgctttcctgaaaagggatctcggggt
caacccggaccaccagggccacagggtcctattggacccctgggaccaccaggacccatt
gggatcccaggagagaaagggatgaaaggagacagtggccgtcctggagcagcaggtgac
aaaggtgataagggtccaaccggagttcctggatttccaggtctggatgggatacctggg
cacccagggcctcctggatccagaggcagacctggcatagatggctacaatggctcaaga
ggtgatccagggattccaggagaaagaggagctcttggcccacgaggccccccaggcctt
cctggagaaaaaggagaaaaaggaaattcagtgttcattttaggtgccactaaaggtatg
cagggcgacagaggggacccaggacctcccggctcaccaggatcaaggggagtgagaggc
ccagcaggcccagcggggtacccgggagagcccgggttagcaggacctccaggcccccct
gggagtccaggcttaaagggtaatcctggcgtaggagtaaaggggcaaatgggagacccg
ggtgaggttggccaacaaggttctccgggacccactctgttggtgcagccacccgattct
ggtctctataaaggagaaaagggtattaaaggactgcctggaatgactggacctcctgga
ccaccaggagccaagggaaaacctggtattgggagaaaaggagagaaagggattcctggg
tttccaggacctcggggggaccctggttcctatggatctccaggttttccaggattaaag
ggggaaccaggactgtttggagatcctgggtcatttggatttcttggcccaaagggagat
cctggagaccgtgggcacccaggaccaccaggggttttggtaactccatctcttccactc
aaaggccctccaggggatccagggcgccccggccactatggagaaacaggggctgttgga
ccacgtggtcctcctggtgccccaggtagaccaggggaagcctgtgcaggcatgacggga
cctcctgggccacgagggtttcctggtcaccccggatttccaggggcagctggtgttcct
gggagagctgattctgctccaggaaaaccaggcaaccagggaccaaccgggctgcctggg
gtgccgggactgccaggacctccaggatcagatgttgtatattgtactcttgggcaacct
ggaccacaaggaataaaaggcaaagtgggtcctcccggaagacgaggctccaaaggagaa
aaagggagctcagggctctgtgcctgccagcctggtcccatgggcccaccaggccctcca
gggcctcctgggaggcaagggagtaagggagacttggggctccctgggtggcttggcgaa
aaagggtccccaggccctcctggtgccaaaggatctccagggccaccaggaaaacccggt
gcctcaggactacctggcaacaaaggagaaaaaggtgacatggttgtatcgagagtgaaa
ggacacaaaggagaaagagggcctgatgggccccctggacttccagggcagcagggacaa
cacggtcgagatggatatgctggagaaaagggagacccagggctgcctggtgatcacgaa
gatgcggccccaggtgataaagggcctcctggaccaccaggcccccctggcagagcgggg
cctagggggcccccaggcctgggatttcctggccccccaggagagagagggcaaccagga
gctccaggctggccaggcaacaggggtcctgatggtcggaagggtcagaaaggtgataca
attccttgtaacgtaacataccctgggaggccaggccctccaggttttgatggtcctcca
ggtccaaagggacttccaggtcatcggggtgctcctgggctgaggtgtttggatgggcaa
aagggtcaacgtggcaaaccaggaatctcagaaagacctggtccacctggtttccgtggt
gatacaggagaaccaggtttgggaggtgaaaaggggtcctcccctgttgggcccccaggc
gctccaggttcacctggagtgactggtcagaaaggacccccaggagatcctgctatcggc
tacccaggactcccaggaaagagcggtcttccaggagcaccagggtccaaaggactcaga
ggcgatgccgggcatccagggaccgcagggccagctggcatgcccggatttccgggtctc
caaggtcccaaaggccgagagggaagtgctgggtttccagggatcccaggcccacctggt
cactcctgtgaaagaggtgctccagggataccagggcaaccggggctccccggggctcca
ggcagtccaggtgccccaggttggaaaggacagcgaggggacatggggcctctgggacct
gctggaatgaagggcctccctggagtcccgggacggccaggggcagatggaaccccaggt
tttccaggggtcccaggccccactggagacgatgggctacctggtcttccaggcccaaag
ggaccccaggggctgcctggcttcctgggttttccgggagagagaggaaaacctggtcag
gatggacaccctggcagaaagggagaacacggagagaagggttggcctggctccctggga
gaccaaggactgaaaggtgtcaaaggagcaagaggacccctgggatatgaaggagaaatg
gatattatttccaagaagggggaaacaggagaacctggaccttctggggatggtggattc
ccaggagaaaatggtgataaaggtcatcctgggatgcaaggaaggagaggagagccagga
agctatggaccacctggatttcaccctggggagcccggaagaaatgggcagccagggctt
cctggacccctaggccctccaggctcacctgggctgagagggatcattggttttccagga
tttccgggtgaccagggtgaaccaggttctccagggtgcccgggaccttcaggaattgat
ggtacaagaggacctaaaggatacaaaggggaatctgcaagtcagtttggcctacctggt
ccaaagggtgagccaggtagccccggatatccaggacagttgggagcatctggagagcag
ggcttgcctggtgctcaaggtcctggaggaccacccggaaggccaggacctcctggcttc
tctggaccaacaggatgtccaggtaatccaggggggcctgggctgcagggacccccagga
gaagtgggggatcctggaccaagaggcatcgtgggggacccaggggcaccaggtcttcca
ggaataaaaggtccctctgggtcacccggcctgaacggcctgcatggtttgaagggtcag
aaaggcagcaaaggcgcttcaggttcgcatgaaatgggccccccaggtccagtgggaatt
cccggccctaaaggggaggcaggagaccctgggaacccaggaatttctcctccgggacct
ttcggagaaagaggtcccccgggtcccccaggacccccagggagagctggatcgcctggt
cctccaggtgccccaggaaaagctcttaagggtgacattccagacccgggtctgcctgga
gatcagggacctcctggccccgatggtccaagaggagtacctgggcctccaggaccacct
gggagtgtcgaccttctgaaaggggaaccaggagactgtggtctgccggggcctccaggt
ctcccaggcccaccaggccctccaggacacaaaggcttcccaggatgtgatggaaaacac
ggccagaaaggaccaatgggattcccggggccacaggggccacctggaagtcctgggcca
cctggagacaaaggtttacctggacctccaggcagacgagggcctttgggtcctccaggt
tccagaggtgagcctgggcccccagcagacttggatgcctgcccccgaatcccagggctt
cctggggtaccaggcccgagaggaccggaaggaaccatggggcttcctggcatgagaggc
ccaccgggaccagggtgcaaaggagagcctgggctggatggcaggagaggtgaggatggc
ctcccagggtcccctgggcctccgggacataaaggggacatgggagaagcgggctgtcca
ggagcaccaggccctcctgggcccataggggaccctgggcctatagggtttggccctgga
tacctcagtggcttcctcctggttctccacagtcagacggatggagaacccacctgccct
atgggcatgcccaggctctggactgggtatagcctgctatacctggaaggacaggagaaa
gctcacaatcaagacctaggtctggcgggctcctgcctccccatctttagcacgctgccc
ttcgcctactgcaacatccaccaggtgtgccactatgcccggaggaatgacaggtcctac
tggctagcaagcactgcgcctctgcccatgacgcccctctcggaggacgagatccgcccg
tacatcagccgctgtgccgtgtgcgaggcccccgcccaggccgtggcagtgcacagccaa
gaccagtccatccccccgtgtccacgggcctggaggagcctctggatcgggtactccttc
ctcatgcacacaggcgctggggaccaaggaggcgggcaggccctcatgtccccaggcagc
tgcctagaggatttcagagctgcaccgttcctggaatgccaaggccggcagggaacttgc
cacttttttgccaacaagtatagtttctggctgacaacggtgagaccggacttgcagttt
tcctctgcaccattaccggacaccttgaaagaaagccatactcaacgccagaaagtcagc
aggtgccaagtctgtgtgaagcatagctaa

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