Capra hircus (goat): 102190238
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Entry
102190238 CDS
T02910
Symbol
SPAST
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
chx
Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
chx04131
]
102190238 (SPAST)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
chx04812
]
102190238 (SPAST)
Enzymes [BR:
chx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
102190238 (SPAST)
Membrane trafficking [BR:
chx04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
102190238 (SPAST)
Cytoskeleton proteins [BR:
chx04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
102190238 (SPAST)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
AAA_22
AAA_5
TIP49
AAA_16
AAA_14
Mg_chelatase
IstB_IS21
DUF815
AAA_24
nSTAND3
NPHP3_N
MAPEG
AAA_2
MIT
Motif
Other DBs
NCBI-GeneID:
102190238
NCBI-ProteinID:
XP_013822976
UniProt:
A0A452ER88
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Position
11:14556017..14608600
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AA seq
614 aa
AA seq
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MNSPGGRGKKKGSGGPSSPVPPRPPPPCLARSRPAPKPAPSPQSPHKRNLYYFSYPLFVG
FALLRLVAFHLGLLFVWLCQRFSRALMAAKRSSGAAPASASPPAPVPGGEAERVRAFHKQ
AFEYISVALRIDEDEKVGQKDQAVEWYKKGIEELEKGIAVVVTGQGEQCERARRLQAKMM
TNLVMAKDRLQLLEKLQPSLQFSKSQTDVYNDSTNLTCRNGHLQSESGAVPKRKDPLTHA
SNSLPRSKTVMKTGPTGLSGHHRAPSCSGLSMVSGVRQGPGSAAAAHKSTPKTNRTNKPS
TPTTAARKKKDLKNFRNVDSNLANLIMNEIVDNGTAVKFDDIAGQELAKQALQEIVILPS
LRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKL
VRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLV
MGATNRPQELDEAVLRRFTKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARMTD
GYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDFTESLKKIKRSVSPQTLE
AYIRWNKDFGDTTV
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgaattctccgggtggacgagggaagaagaaaggctccggcggccccagcagcccggtg
cctcccaggcctccgcccccctgcctggcccgctcccgtcccgcccccaagccggcccct
tcgccccaatcgccgcataagcggaacctgtactacttctcctacccgctgttcgtaggc
ttcgcgctgctgcgcctggtcgccttccacctggggctcctcttcgtgtggctctgccag
cgcttctcccgcgccctcatggccgccaagaggagctccggggccgcgccggcctcggcg
tcgcccccggcaccggtgccaggcggggaggccgagcgcgtccgagcgttccacaaacag
gccttcgagtacatctccgtcgccctgcgcatcgatgaggacgagaaagtaggacaaaag
gaccaagctgtggaatggtataagaagggtattgaagaactagaaaaaggaatagctgtc
gttgttacaggacaaggtgaacagtgtgaaagagctagacgccttcaggctaaaatgatg
actaatttagtgatggccaaggaccgtttacaactattagagaagctgcaaccaagtttg
caattttccaagtcacaaacggacgtctataatgacagtactaacttgacatgccgtaat
ggacatctccagtcagaaagtggagctgttccaaaaagaaaagatccgttaacacatgct
agtaattcactgcctcgttcaaaaacagttatgaaaactggacccacaggtctttcaggc
caccatagagcacctagttgcagtggtttatccatggtttctggtgtgagacaaggacct
ggttctgcagctgccgctcataagagtacaccaaaaacaaatagaacaaataaaccttct
acccctacaactgctgctcgtaaaaagaaagacctgaagaattttaggaatgtggacagc
aaccttgctaaccttataatgaatgaaattgtggacaacggaacagctgttaaatttgat
gatatagctggtcaagagctggcaaaacaagcattgcaagaaattgttattcttccttct
ctgagacctgagttgttcacagggcttagggctcctgccagaggattgttactctttggt
ccacctggaaatgggaaaacaatgctggctaaagcagtagctgcagaatctaatgcaacc
ttctttaacataagtgctgcaagtttaacttcaaaatatgtgggagaaggagagaaattg
gtgagagctctttttgctgtggctcgagaacttcaaccttccataatttttatagatgaa
gttgatagtcttttgtgtgaaagaagagaaggagaacatgatgctagcagacgtctaaaa
actgaatttctaatagaatttgatggtgtacagtctgctggagatgaccgagtgcttgta
atgggtgcaactaacaggccacaagagcttgatgaagctgttctcaggcgttttaccaaa
cgggtttatgtgtctttgccaaatgaggagacacgactacttttattaaaaaatctatta
tgtaaacaaggaagcccattgacccaaaaagaactagctcaacttgctagaatgacagat
ggatactcaggcagtgatctcacagctttggctaaggacgcagcactgggtcctatccga
gaactgaaaccagaacaagtgaagaatatgtctgccagtgagatgagaaatattcgatta
tctgacttcaccgaatccttaaaaaagataaaacgcagtgtgagccctcaaacgttagaa
gcatacatacgttggaacaaggactttggagataccactgtgtaa
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