Capra hircus (goat): 102190256
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Entry
102190256 CDS
T02910
Symbol
SIX5
Name
(RefSeq) homeobox protein SIX5
KO
K19474
homeobox protein SIX5
Organism
chx
Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
chx03000
]
102190256 (SIX5)
Transcription factors [BR:
chx03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
102190256 (SIX5)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
102190256
NCBI-ProteinID:
XP_017918113
UniProt:
A0A452FQ65
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All DBs
Position
18:complement(54359441..54363943)
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AA seq
738 aa
AA seq
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MATLPAEPSARPAAGGEAVVAAAATEEEEEEARQLLQTLQAAEGEAAAAAGAGAGETAVK
VEGPGSPGVPGSPPEAAAEPPMGLRFSPEQVACVCEALLQAGHAGRLSRFLGALPPAERL
RGSDPVLRARALVAFQRGEYAELYRLLESRPFPAAHHAFLQDLYLRARYHEAERARGRAL
GAVDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGL
SLTQVSNWFKNRRQRDRTGGGGGAPCKSESDGNPTTEDESSRSPEDLERGAAPAAAEGPA
PGSIFLAGASPPAPCPASSSILVNGSFLAAGSSPAVLLNGSPVIINSLALGEASGLGPLL
LTGGAPAPQPSPQGPSEGKTSLVLDPQTGEVRLEEAQPEAPETKGAQVTASGPPGEEVPT
PLPQVVPGPPTAATFPLPPGPVTSMAAPQVVPLSPPPGYPAGLGPTSPLLNLPQVVPTSQ
VVTLPQAVGPLQLLAAGPGSPVKVAGASGPANVHLINSGVGVTALQLPSATTPGNFLLAN
SVSGSPIVTGVAVQQGKIILTATFPTSMLVSQVLPPAPSLALPLKPDTAISVPEGALPVA
TSPALPEAHALGALPVQQPPQPPPTPATPTPSLPFSPDSSGLLPGFPAPPTEGLLLSPAA
VPIWPAGLELSASTEGLLEEEKGLGTQAPHTVLRLPDPDPEGLLLGATAGGEVDEGLEAE
TKVLTQLQSVPVEEPLEL
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggctaccttgcctgcggagccgagcgcgaggccggcggccgggggggaggcagtggta
gcggcggcggcgaccgaagaggaggaggaggaagcgcgccagctcctgcagactttgcag
gcggccgagggtgaggcggcggcggcggccggggccggggcgggcgaaacggcggtgaaa
gtggagggccccggatccccaggcgtccccgggtcgccccccgaggccgctgccgagccg
cccatggggctccgcttctcgccggagcaggtggcgtgcgtgtgcgaggcgctgctacag
gcaggccacgccggccgcttgagccgcttcctgggcgcactgcctccggccgagcgccta
cgtggcagcgatcctgtgctgcgcgctcgggccctggttgccttccagcgaggcgagtac
gccgagctctaccggctgctcgagagccgccccttccccgccgcccaccacgccttcctt
caggacctctacttgcgcgcgcgctaccacgaggccgagcgggcccgcggccgcgcgttg
ggcgcagtggacaagtaccgtctgcgcaagaaattcccgctgcccaagaccatctgggac
ggcgaggagaccgtctactgcttcaaggagcgctcccgcgccgcgctgaaggcctgctat
cgcggcaaccgctaccccacgccggacgagaagcgccgcttggccacgctcaccggcctc
tcgctcacgcaagtcagcaactggttcaagaaccgacgacagcgcgaccggaccgggggc
ggcggcggcgcgccctgcaagagcgagtctgatggaaaccccactactgaggacgagtcc
agccgcagtcctgaagacctggagaggggggcggctccggcggcggccgagggcccagcg
ccaggctccatattcctggccggggcctcccctcccgcaccgtgccctgcctcctcctcc
atcctggtgaatgggagcttcctggcggccggcagctctccagcagtgctcctcaatggg
agccccgtcatcatcaacagcctggccctgggcgaggcctccggcctgggccccctgctg
ctcactgggggtgcccctgctccacagcccagcccccaagggcccagcgaaggcaagacc
tccctggtcctggaccctcagactggagaggttcgactggaggaggctcagcctgaagcc
ccggagaccaagggggctcaggtgactgcttcagggccccctggagaggaggtcccgacg
cctctgccccaggtggtgcctggccctcctacggcagccacctttccactgcccccagga
ccggtgacttccatggctgctccccaagtggtgccgctttccccaccccctggctaccct
gccggcctgggtcccacctccccactgttgaacctgccccaggtggtgcccacctcacag
gtggtgaccctgccccaggccgtggggccgttgcagctgctggcagctgggccaggcagc
ccagtgaaggtggctggcgcctcgggccctgccaatgtgcacttgataaactccggtgtg
ggtgtgactgcgctgcagctgccttcggccactaccccaggaaacttcctgctggccaac
tccgtgtctggcagccccatcgtgacaggtgtggccgttcagcagggcaagatcatcctc
accgccactttccccaccagcatgctggtctcccaggttctgccgcccgcccccagcctg
gccctgcccctgaagccggacacagccatctcggtgcccgaaggagccctcccggtggcc
accagccccgctcttccggaggcccacgccttaggcgcgcttcctgtgcagcagccaccc
cagccgccccccacccccgccacccccaccccaagtctgcccttctccccagactcctct
ggcctcctgcccggtttcccggcgcccccgactgaggggctgctgctatcgcccgcagcc
gtgcccatctggccagccgggctggaactgagcgccagcactgaggggctgctagaggaa
gagaaggggctgggaacacaggccccccacaccgtgctgaggctgccggaccctgacccc
gaggggctgctcctgggggccaccgcagggggtgaggtggacgaggggctggaagccgag
accaaggtcctgacgcagctacagtcagtgcctgtggaagagcccttggaactgtga
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