Capra hircus (goat): 102190364
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Entry
102190364 CDS
T02910
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
KO
K06237
collagen type IV alpha
Organism
chx
Capra hircus (goat)
Pathway
chx04151
PI3K-Akt signaling pathway
chx04382
Cornified envelope formation
chx04510
Focal adhesion
chx04512
ECM-receptor interaction
chx04820
Cytoskeleton in muscle cells
chx04926
Relaxin signaling pathway
chx04933
AGE-RAGE signaling pathway in diabetic complications
chx04974
Protein digestion and absorption
chx05146
Amoebiasis
chx05165
Human papillomavirus infection
chx05200
Pathways in cancer
chx05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
102190364 (COL4A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102190364 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102190364 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102190364 (COL4A3)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
102190364 (COL4A3)
09154 Digestive system
04974 Protein digestion and absorption
102190364 (COL4A3)
09158 Development and regeneration
04382 Cornified envelope formation
102190364 (COL4A3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102190364 (COL4A3)
09162 Cancer: specific types
05222 Small cell lung cancer
102190364 (COL4A3)
09172 Infectious disease: viral
05165 Human papillomavirus infection
102190364 (COL4A3)
09174 Infectious disease: parasitic
05146 Amoebiasis
102190364 (COL4A3)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
102190364 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
chx04147
]
102190364 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
chx00536
]
102190364 (COL4A3)
Exosome [BR:
chx04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
102190364 (COL4A3)
Glycosaminoglycan binding proteins [BR:
chx00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102190364 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
102190364
NCBI-ProteinID:
XP_017914344
LinkDB
All DBs
Position
2:complement(20247991..20407244)
Genome browser
AA seq
1670 aa
AA seq
DB search
MRPRTAPRLPALLLPLLLVLLVAAPTEGKGCICKDKGRCFCDGAKGEKGEKGFPGPPGPP
GQKGYPGPEGLPGPQGPKGSPGSPGLTGAKGVRGITGLPGFSGPPGLPGIPGHPGPYGLA
GLPGCNGSKGEPGFPGLRGTPGYPGIPGVIGLKGEKGAPAEGEGVGLDGKGDPGLPGAPG
FQGLPGLPGFPGPAGPRGPPGFLGFPGTMGPPGPKGHMGDNMLGQKGERGVKGLTGPPGP
PGTVIVTLTGPDNRTDLQGEKGDQGAMGQSGPPGPSGPPGESYGSEKGAPGEPGLQGKPG
KDGAPGFPGTEGAKGDKGFPGLRGEDGIKGWKGDSGPPGFRGPTEYYDAYQEKGEEGIPG
LPGPKGARGPQGPSGPPGTPGSPGSSRPGLRGAPGVPGVKGSKGEQGPPGKTAAGPPGSP
GRPGSPGPVGFPGPPGPPGGIVFREGPPGVGGLPGHIGSPGIPGVSGPKGEPGLLCTQCP
CVPGSPGPPGLPGLEGEKGFQGEPGAAGIKGSPGSPGSAGLPGFPGFPGAQGQPGLKGEK
GETSRPEGQVGAPGDPGLRGHPGRKGLDGIPGTPGVKGLPGPKGEPALSGEKGDPGLPGD
PGIPGSPGPIGPAGPSDYGPQGEPGPKGAQGLPGAPGPPGEAGPEGETGVSTPVPGPPGP
PGPPGRAGPRGPPGIPGSTGECDLGLPGPDGEPGIPGIGFPGPPGPKGDRGFPGTKGSPG
CPGEMGKPGLPGKPGLPGIKGEPGLAMPGEPGAPGLPGERGSAGENGEIGLPGLPGLPGV
PGTGGLDGPRGDPGKPGPPGERGPPGRCTEGPRGAQGLPGLNGLKGQQGRRGETGPKGDP
GIPGLDRSGFPGEPGLPGMPGHRGEMGPPGPKGYPGNPGFLGPPGEKGMMGMMGFPGNIG
PPGPPGNPGTPGQRGSFGIPGVKGARGPPGAKGEQGERGAPGSPQIFHLVGDKGEPGLKG
LAGKPGEKGYRGIPGLPGIKGLPGLPGPPGPPGPRGEPGSIGNPGEPGPRGIPGSMGNMG
VPGTKGMKGTVGFPGLAGSPGLPGIHGLQGDKGEPGYSEGARPGPPGPKGDPGLPGDMGK
KGERGPPGAPGRSGPAGPEGLPGSPGPPGHPGKSGPGGDLGSKGIKGFPGFPGIKGPPGP
PGLPGNPGPVGERGNQGLDGIPGPPGEKGETGLLGAPPGPRGKPGPQGTKGDRGVPGLPG
LPGREGPVGDAGPPGPIGMTGPQGAPGFPGVTIPGQKGDQGPPGSRGNPGMPGPPGPPGS
PVEGIKGDKGLMGEPGQRGPPGAVGDMGPPGHPGAPGVPGQPGARGDPGFYGFPGMKGEK
GNSGFPGPPGPPGRIGPKGPPGVRGEPGTVKIISLPGSPGPPGSAGEPGMQGEPGPPGPP
GDPGPCGPRGKPGEDGPPGTPGPTGEKGNKGSKGEQGPPGSDGLPGLKGKPGDTGPPAAG
TVMRGFVFTRHSQTTAIPSCPAGTEPLYSGFSLLFVQGNEQSHGQDLGTLGSCLQRFTTM
PFLFCNINDVCNFASRNDYSYWLSTPATIPMDMAPITGRALEPYISRCTVCEGPAIAIAV
HSQTTDIPPCPAGWISLWKGFSFIMFTSAGSEGAGQALASPGSCLEEFRASPFIECHGRG
TCNYYSNSYSFWLASLDPKRMFRKPIPSTVKAGELENIISRCQVCMKRRP
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccgaggaccgcgccgaggctaccggcgctgctattgccgctcctgctggtgctc
ctggtggcggcgcccacggagggcaagggctgtatctgtaaagacaaaggccggtgcttc
tgtgatggggccaaaggggagaagggggagaaaggcttcccaggacccccagggcctcct
ggccagaagggatacccaggtcccgaaggcttgcctggaccacagggacccaagggctct
ccaggatctccaggactgactggtgccaaaggcgtgaggggaataactggattaccagga
ttttcaggtcctcctggacttccaggcatcccaggccatcctggaccttatggacttgct
ggtttgccaggatgtaatggttccaagggagagccagggttcccaggacttcgggggacc
ccaggctacccagggataccgggtgtcattggtttgaaaggagaaaagggcgctcctgct
gaaggagaaggcgtaggccttgatggaaaaggtgaccctgggttgccaggagctcctgga
ttccagggcttgccaggccttccaggttttcctggacctgcgggtccacgtggccctcca
ggattccttggctttccaggaaccatgggacctccaggacctaagggtcacatgggtgat
aacatgctaggacagaaaggagagcggggtgtgaaaggattgacaggaccacctggacca
ccaggaacagttattgtgactctaaccggccctgataacagaacggacctccagggagag
aagggggaccagggagccatgggacagtccggaccccctggaccctccgggccacctgga
gaatcttatggatcagaaaaaggtgctcctggagaaccaggcctgcagggaaagcctgga
aaagatggtgcccccggtttccctggcactgagggagccaaaggcgacaagggtttccct
gggttaaggggtgaagatggcattaaggggtggaaaggagactctggccctccaggattt
cgtggtccaacagaatattatgatgcataccaggaaaagggagaagaaggaattccaggc
ctaccagggccaaagggagctcgtggcccacagggtcccagtggtccccctggaacccct
ggaagtcctggatcatcaaggcctggcctccgaggagcccctggagtacccggtgtgaaa
ggaagtaaaggggagcaagggcccccaggaaagactgcagcagggcctccggggtccccc
ggccgtcctggttctccaggtcctgtggggttcccgggacctccaggcccaccaggtggt
attgtttttcgcgaaggaccacctggagtcggtggacttccaggccacatagggtcgcca
ggtatcccaggagtcagtggacccaaaggggagccaggcctcctgtgcacacagtgtcct
tgtgtcccagggtctccaggcccccctggattgccagggttagaaggcgaaaaaggattc
caaggagaaccaggggcagctggcattaaaggaagcccagggtccccaggaagtgctggt
cttccaggatttccaggattcccaggtgctcagggtcagccgggacttaaaggagaaaaa
ggtgaaacatctcggccagagggacaagtgggtgccccaggggatccgggactcagagga
catcctggaagaaagggcttggatggcattcctgggactccgggagtgaaaggattacca
ggacctaaaggagaaccggccctgagcggtgagaagggggacccaggtcttccaggggat
cctggtatccctgggtccccaggacccataggaccggctggaccatcagactatggacca
cagggagagcctggtccaaagggagcccaaggacttcctggagcccctggaccacctgga
gaagccggtcctgagggagaaactggtgtttcgacaccagtcccagggcccccaggaccc
cctgggcctccaggccgtgctggtccccggggtccacctggtatccctggatccacagga
gaatgtgatctgggtctcccggggcctgatggtgaaccaggaattccaggaattggattc
cctgggcctcctggaccgaagggtgaccgagggtttccaggaaccaaaggatcaccaggt
tgtcctggagaaatgggaaagccaggcttacctggaaagccaggcctcccaggaatcaag
ggagagccaggactagccatgcctggagaacccggagcgccaggtttgccaggagaaaga
ggcagcgctggggaaaatggagaaattggactccctggacttccgggtctccctggagtt
ccaggaactggggggcttgatggaccacgaggggatccagggaagcccgggccacctgga
gaaagaggacccccaggaaggtgcacagagggccccaggggagctcaaggacttccaggc
ttaaatggattgaaagggcaacaaggcagaagaggtgaaacagggccaaagggagaccca
gggatcccgggcttggataggtcaggatttcctggagaacctggactaccaggaatgcca
ggtcaccgaggggagatgggaccacctggtccaaaaggatatccaggaaatccaggattt
ttagggccaccaggtgaaaaaggaatgatggggatgatggggtttccaggcaacattggt
cccccagggcctcctgggaacccaggcaccccaggacagagggggagctttggaattcca
ggagtaaagggcgcgagaggacccccaggagccaaaggggaacagggagagagaggagct
cccgggtctcctcagatattccacttagtgggggacaaaggggagccaggactcaaagga
cttgcaggaaagcctggtgagaaaggatacagaggcattccagggttaccaggtataaaa
ggactcccagggcttcctggaccaccaggaccaccaggccccagaggagagccgggcagc
attgggaatcccggtgagccaggaccacgtggtatcccaggaagcatgggaaacatggga
gtaccaggtactaaaggaatgaagggaactgtggggttcccgggtctagctggaagtcca
ggcctcccgggtattcatggtctccaaggagataagggagagccaggttattcagaaggt
gcaaggccaggaccaccaggaccaaagggagatccaggattgccaggtgacatgggcaag
aaaggcgaaagagggccacctggcgcacctggacgttcggggcctgctggaccagaggga
cttcctgggagtcccggaccccctggccacccagggaaatctggacctggtggtgatttg
gggtccaaaggaatcaaaggcttccctggctttccaggaataaaaggccctccaggtcct
ccaggattgccaggaaatcctggaccagtgggtgagagaggtaatcaaggacttgatgga
attcctggtccacccggagaaaaaggagaaacaggcttgctgggagcacctccaggtcca
agagggaaacctggtcctcaaggaaccaaaggagacaggggagtaccaggcttgcctggc
ctccctggcagggaagggccagtgggagatgctgggcctccagggcccattggcatgaca
ggacctcaaggggcaccaggctttcctggtgtaaccatccctggacagaaaggagatcaa
ggtccacctggctctagaggaaacccaggcatgcctggtcctcctggacctccagggagt
cctgtagaaggcataaaaggagacaaggggttgatgggagagcctggccaaagaggtcca
cctggagccgtaggagacatggggccaccaggtcacccgggagcaccaggtgtccccggt
cagccaggggccagaggtgatcctggattctacggatttccaggcatgaaaggggagaag
ggtaattcaggatttccaggaccacctggacctccagggcgaattgggccaaaaggacca
cctggtgtacgtggagagcctggcacagtgaagatcatctcccttccaggaagcccaggc
ccacctggttcagctggagaaccagggatgcaaggagaacccgggcccccaggaccacca
ggagatccaggaccctgtgggccaagaggtaaaccaggagaggatggtccacctggaact
cctggaccaactggagaaaaaggcaacaaaggttctaaaggagagcaaggaccacctgga
tccgacggcctgccaggcttgaaggggaaacctggagacactggaccacctgcagcgggg
acagtgatgaggggctttgtctttacccggcacagccagaccacagcgattccctcctgt
ccagcagggacagagccactctatagtgggttttctcttctgtttgtgcaaggaaatgaa
caatcccatggacaggacctgggaacactcggcagctgcctgcagcgatttaccacaatg
ccattcttattctgcaatatcaacgatgtatgtaatttcgcatctcgaaacgattattca
tactggctgtcaacaccagctacgataccaatggacatggctccaattactggcagggcc
ctggagccttatattagcagatgtacagtctgtgaaggtcctgcaatagccatagctgtt
cacagccaaaccactgatatccccccctgtcctgctggctggatttctctctggaagggc
ttttctttcatcatgttcacaagtgccggttcggagggtgctgggcaagcacttgcatcc
cctggctcctgcctggaagaattccgagccagtccatttatagaatgtcacggaagagga
acatgcaactactattcaaactcctacagtttctggttggcttcattagaccccaaaaga
atgttcagaaaacccattccatcaactgtgaaagctggggagttagaaaacataataagt
cgctgccaagtgtgcatgaagaggagaccatga
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integrated database retrieval system