Capra hircus (goat): 102190392
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Entry
102190392 CDS
T02910
Symbol
SMARCAD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
chx
Capra hircus (goat)
Pathway
chx04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
102190392 (SMARCAD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
chx03036
]
102190392 (SMARCAD1)
Chromosome and associated proteins [BR:
chx03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102190392 (SMARCAD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
CUE
ERCC3_RAD25_C
TTC3_9th
Motif
Other DBs
NCBI-GeneID:
102190392
NCBI-ProteinID:
XP_005681475
UniProt:
A0A452EEN5
LinkDB
All DBs
Position
6:complement(30850057..30940436)
Genome browser
AA seq
1028 aa
AA seq
DB search
MNLFNLDRFRFEKRNKIEEAPEATPQPSQPGPSSPISLSAEEENAEGEVSRAGTPDSDVT
EKTEDSSVPETPENDRKASISYFKNQRGIQYIDLSSDSEDVVSPNCSSTVQEKKFNKDTV
IIVSEPSEDEESQGLPTMATRNNNDISELEDLSELEDLKDAKLQTLKELFPQRSDSDLLK
LIDSTSTMDGAIAAALLMFGDAEGGGPRKRKLSSSSEPFEEDEFNDDQSMKKKRLDHGEE
SNESAESSTNWEKQESIVLKLQKEFPNFDKEELREVLKEHEWMYTEALESLKVFAEDQDM
QYASPSEFPNGKEVSSRSQNYPKNATKTKLKQKCSMKPQNGFNKKRKKNVFNPKRVIEDS
EYDSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKITEL
RPFNSWEALFTKMSKTNGLSEDLIWHCKTLIQERDVVIRLMNKCEDISNKLTKQVTMLTG
NGGGWNTEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAY
LYQEGNKGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSRYEEYN
VIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGT
PVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKPF
ILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYMNLFNRLKKSINNLEKNTEMCNVMMQL
RKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYR
HINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYL
RLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQ
AEDRCHRVGQTKEVLVIKLIGQGTIEESMLKINQQKLKLEQDMTTVDEGDEGSMPADIAT
LLKTSMGL
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttttcaacctggaccgttttcgctttgagaaaagaaataagattgaggaagcg
cccgaagcaacccctcaaccctcccagcctggcccttcttcaccaatttctcttagtgct
gaagaggagaatgctgaaggggaagttagcagggcaggcacccctgattcagatgtaact
gaaaaaacagaagattctagtgttccagaaactccagaaaatgacagaaaagcaagtata
tcatatttcaagaatcaaagagggattcaatacattgatttgtcttctgatagtgaagat
gttgtatccccaaattgctccagtacagttcaagagaaaaaattcaacaaagacacagtg
attatagtttctgagccatctgaagatgaagagtcccaaggccttcctaccatggccact
agaaacaacaatgatatttcagaactggaagacctttcggaattggaggaccttaaagat
gctaaacttcagaccctgaaggagctttttccacaaagaagtgacagtgatttacttaag
ttgattgactcaacaagcactatggatggagcaattgctgctgccttgctgatgttcggt
gacgcagaaggtggtggacccaggaaaagaaaattatcttcttcttcagagccattcgag
gaagatgaatttaatgatgatcaatctatgaaaaagaagagattggatcatggagaagag
tcaaatgaatctgcagagtctagcactaactgggaaaagcaggaaagtattgtgttgaaa
ttacaaaaggaatttcccaattttgataaagaggaattaagggaagtactcaaggaacat
gaatggatgtacacagaggctttagaatctttaaaagtatttgcagaagaccaagatatg
caatatgcttcaccgagtgagtttccaaatggaaaagaggtttcttcaagaagtcaaaat
tatcctaaaaatgcaactaaaacaaaactgaaacagaaatgttccatgaaaccacaaaat
ggttttaacaagaaacgtaaaaaaaatgtatttaatcctaaaagagttattgaagactct
gaatatgattcaggttctgatgtcggtagttcgctagacgaggactatagtagtggtgaa
gaagtgatggaggatggctataaaggtaaaatcctccacttccttcaagatgcttcaatt
ggtgaacttactttgattcctcagtgttctcagaaaaaggctcagaagataacagaactc
cggccctttaatagttgggaagctctgttcacaaagatgtccaaaacgaatggcttatca
gaagatttgatatggcactgtaagacactgattcaagaaagggatgtagttataaggctt
atgaacaaatgtgaagacatttcaaataaactgacaaaacaagttaccatgctcactgga
aatggaggtggatggaacacagagcaaccctccattctaaaccaaagtttgtcactcaag
ccctatcagaaggttggtttgaattggctggcattggtacataaacatggacttaatggc
attttggcagacgaaatgggcctgggaaaaactattcaagccattgcatttctggcgtac
ctctatcaggagggtaataaaggtcctcatttgattgttgttccagcatcaactatagat
aactggttaagagaagttaatttatggtgccccactttaaaggtgctctgttactatggt
tctcaagaagaacgtaaacagattagatacaacattcatagtagatatgaagaatacaat
gtaatcgtgaccacgtataactgtgctatcagcagttctgatgatcgtagtttgtttcgt
cggctgaaactgaattatgcaatttttgatgagggccatatgctgaagaatatgggctcc
atccgctaccagcaccttatgacaattaatgcaaataaccgtctgctgctcacaggcaca
cctgtgcaaaataacctgttagaactcatgtcactgttgaattttgttatgccgcatatg
ttcagtagtagcaccagtgaaatacgaagaatgttttcttctaagacaaaatcagcagat
gagcaaagtatatatgaaaaggagagaatagcacatgcaaaacaaattataaaaccattt
attctcagaagagtaaaagaagaggttctcaagcagctaccccccaaaaaagatcgaatt
gagttatgtgcaatgtcagagaagcaggaacaactgtatatgaatctcttcaacagattg
aaaaagtctatcaataacctagaaaaaaatacagaaatgtgcaatgtcatgatgcaattg
agaaaaatggccaatcatcctttattacatcgccaatattacacagctgaaaaactcaag
gaaatgtctcagcttatgctaaaggaacctacacattgtgaggctaaccctgacctgatc
tttgaagatatggaagttatgacagattttgaattacatgtactttgtaaacagtatcga
catattaataacttccagttagacatggacttgattttagattctggaaaatttcgagtt
ttaggatgcatcttgtctgaattgaagcagaagggtgatagagttgtattatttagccaa
tttaccatgatgctggatattttagaggttctcttaaagcatcatcagcataggtacctc
agattagatgggaagactcagatttctgaaaggattcatctaattgatgagtttaatacc
gatatggatatcttcgtctttctgctgtcaacaaaagctggtggcttaggaataaacctg
acttcagcaaatgttgtcatccttcatgatattgactgtaatccttacaatgacaaacaa
gcagaagatagatgtcatagagtaggccagacaaaagaagtactagttataaaattaata
ggccaagggacaattgaagaatccatgctaaaaattaatcaacagaaattgaaactggaa
caagatatgaccacagtagatgaaggtgacgaaggaagtatgccagcagatatagccacg
ttactaaaaacatcaatgggcctgtga
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