KEGG   Capra hircus (goat): 102190489
Entry
102190489         CDS       T02910                                 
Symbol
VPS41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
  KO
K20184  vacuolar protein sorting-associated protein 41
Organism
chx  Capra hircus (goat)
Pathway
chx04140  Autophagy - animal
chx04148  Efferocytosis
chx05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:chx00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    102190489 (VPS41)
   04148 Efferocytosis
    102190489 (VPS41)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    102190489 (VPS41)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:chx04131]
    102190489 (VPS41)
Membrane trafficking [BR:chx04131]
 Endosome - Lysosome transport
  Tethering complex
   Hops complex
    102190489 (VPS41)
SSDB
Motif
Pfam: TPR_Vps41 Beta-prop_Vps41 zf-RING_Vps41 Clathrin zf_RING_Vps8_fungal WD40_CDC20-Fz WD40_Prp19 ANAPC4_WD40 Beta-prop_THOC3 Beta-prop_HPS5 WD40_WDHD1_1st Beta-prop_EML_2 Vps39_1 TPR_PEP5_VPS11 Beta-prop_RIG_2nd zf-RING_5 zf_RING_Vps8 RIG-I_C CofB_pilin_dom Beta-prop_ACSF4 zf-rbx1 zf-RING_11
Other DBs
NCBI-GeneID: 102190489
NCBI-ProteinID: XP_005679407
UniProt: A0A452DST1
LinkDB
Position
4:complement(38010750..38210896)
AA seq 854 aa
MAEAEEQETGSLEESTDESEEEESEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLAL
GTHYGKVYLLDVQGNITQKFDVSPVKINQVSLDESGEHMGVCAEDGKVQVFGLYSGEEFH
ETFDCPIKIIAVHPHFVRSSCKQFVTGGKKLLLFERSWMSRWKSSVLHEGEGNIRSVKWR
GHLIAWANNMGVKIFDITSKQRITNVPRDDISLRPDMYPCSLCWKDNVTLIIGWGTSVKI
CSVKERHASEMRDLPSRYVEIVSQFETEFYISGLAPLCDQLVVLSYVKEVSEKTEREYCA
RPRLDIIQPLSETCEEISSDALTVRGFQENECRDYHLEYSEGESLFYIVSPRDVVVAKER
DQDDHIDWLLEKKKYEEALMAAEISQKNIKRHKILDIGLAYINHLVARGEYDIAARKCQK
ILGKNAALWEYEVYKFKEIGQLKAISPYLPRGDPVLKPLIYEMILHEFLESDYEGFATLI
REWPGDLYNNSVIVQAVRDHLKKDSQNRTLLKTLAELYTYDKNYGNALEIYLTLRHKDVF
QLIHKHNLFSSIKDKIVLLMDFDSEKAVDMLLDNEDKISIKKVVEELEDRPELQHVYLHK
LFKRDHHKGQRYHEKQISLYAEFDRPNLLPFLRDSIHCPLEKALEICQQRNFVEETVYLL
SRMGNSRSALKMIMEELHDVDKAIEFAKEQDDAELWEDLILYSIDKPPFITGLLNNIGTH
VDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRTQM
KGILVDEENICESCLSPILPSDAAKPFSMVVFHCRHMFHKECLPVPSMTSPAQFCNICSA
KHRGPGSAILEMKK
NT seq 2565 nt   +upstreamnt  +downstreamnt
atggcggaagcagaggagcaggaaactggatctctggaagaatctacagatgagtctgag
gaagaagagagtgaagaggagccgaaactgaagtacgaaaggctctccaatggggtaact
gaaatccttcagaaggatgctgctagctgcatgacggtccatgacaagttcttggcactg
ggcacacattatggcaaggtttatttacttgatgtccaggggaacatcactcagaagttt
gatgtaagtcctgtgaagataaatcaggttagcctggatgaaagtggagaacacatgggc
gtatgtgcagaggatggaaaggtgcaggtgtttggactgtattctggagaagaatttcat
gagacttttgactgtcccattaaaatcattgctgtgcacccgcattttgtgagatccagc
tgcaagcagtttgtgacgggagggaagaagttgctgctgtttgaacgatcttggatgagc
agatggaagtcttcagttctgcatgaaggggaagggaacataaggagtgtgaagtggagg
ggccatctgattgcctgggccaataatatgggcgtgaagatttttgacatcacctcaaag
cagagaatcacgaacgtgccccgggatgatataagtcttcgcccagatatgtatccctgt
agcctctgctggaaggacaatgtgacgctgatcattggctgggggacgtctgtcaagata
tgctcggtgaaggaacggcacgccagtgaaatgagggacttgccaagtcgatatgttgaa
atagtgtctcagtttgaaactgaattctacatcagtggactggcacctctctgtgatcag
cttgttgtgctttcctatgtcaaggaggtttctgaaaaaacggaaagagaatactgcgcc
agacccagattggatatcatccagccactttctgagacttgtgaagagatttcttctgat
gctctgaccgtgaggggctttcaggaaaatgaatgtagagattatcacttagagtactcg
gaaggggagtcactcttttacatcgtgagtccaagggatgttgttgtagcgaaggaacga
gaccaagatgaccacatcgactggcttcttgaaaagaagaaatatgaagaagctttgatg
gcagctgaaattagccaaaagaacattaaaagacataagattctggacatcggcttggcg
tatataaaccacctggtggcaagaggagagtatgatatagcagcacgcaaatgccagaaa
attcttgggaaaaatgcagcactctgggaatacgaagtttataaatttaaagaaattgga
cagcttaaggcgattagtccttatttgccaagaggggatccagttctgaaaccactcatc
tatgaaatgatcttacatgaatttttggaaagtgattatgagggttttgccacgttgatc
cgagaatggccaggagatctgtacaacaattcagtaatagttcaagcagttcgggatcac
ctgaagaaagatagtcagaacaggaccttacttaaaaccctggcagaattgtacacctat
gacaaaaactatggcaatgctttggaaatatacctaacattaagacataaggatgttttc
cagttgatccacaaacataatcttttcagttctatcaaggataaaattgttttattaatg
gattttgattctgagaaagctgtcgacatgcttctggacaatgaagataaaatttcaatt
aaaaaagtagtggaagaattagaagacagaccagagttgcagcatgtgtatctgcataag
cttttcaaaagagaccatcataagggacagcgctaccacgagaagcagatcagcctttat
gctgaattcgaccgacccaacttgcttccatttctccgagacagtatccattgccccctt
gaaaaggctcttgagatctgtcaacagagaaactttgtagaagagacagtttatcttctg
agccgaatgggtaatagccgaagcgccctgaagatgatcatggaggaattgcatgacgtt
gataaagcgattgaatttgccaaagagcaggacgatgcagaactctgggaagatctgatt
ttatattccatcgacaaaccaccatttatcaccggcttgttaaacaacattggcacgcat
gttgacccgattctactaattcaccgtattaaggaaggaatggagattcctaatttgaga
gactccttagttaaaattctgcaagactacaatttacaaattctgcttcgtgaaggctgt
aagaagattctggtagctgactcactgtccttactaaagaagatgcaccgaactcaaatg
aaaggcattctggttgatgaggagaacatctgtgagtcctgcctttcccctattcttcca
tcagatgcggcaaagcccttcagcatggtggtcttccactgccggcatatgttccacaag
gagtgcctgcccgtgcccagcatgacctctcctgcgcagttctgtaacatctgcagtgcg
aagcaccggggaccaggaagtgccattttggagatgaaaaaatag

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