KEGG   Capra hircus (goat): 102190848
Entry
102190848         CDS       T02910                                 
Symbol
SHFM1
Name
(RefSeq) 26S proteasome complex subunit DSS1
  KO
K10881  26 proteasome complex subunit DSS1
Organism
chx  Capra hircus (goat)
Pathway
chx03050  Proteasome
chx03440  Homologous recombination
chx05010  Alzheimer disease
chx05012  Parkinson disease
chx05014  Amyotrophic lateral sclerosis
chx05016  Huntington disease
chx05017  Spinocerebellar ataxia
chx05020  Prion disease
chx05022  Pathways of neurodegeneration - multiple diseases
chx05169  Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:chx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    102190848 (SHFM1)
  09124 Replication and repair
   03440 Homologous recombination
    102190848 (SHFM1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    102190848 (SHFM1)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    102190848 (SHFM1)
   05012 Parkinson disease
    102190848 (SHFM1)
   05014 Amyotrophic lateral sclerosis
    102190848 (SHFM1)
   05016 Huntington disease
    102190848 (SHFM1)
   05017 Spinocerebellar ataxia
    102190848 (SHFM1)
   05020 Prion disease
    102190848 (SHFM1)
   05022 Pathways of neurodegeneration - multiple diseases
    102190848 (SHFM1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:chx03019]
    102190848 (SHFM1)
   04131 Membrane trafficking [BR:chx04131]
    102190848 (SHFM1)
   03051 Proteasome [BR:chx03051]
    102190848 (SHFM1)
   03400 DNA repair and recombination proteins [BR:chx03400]
    102190848 (SHFM1)
Messenger RNA biogenesis [BR:chx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     102190848 (SHFM1)
Membrane trafficking [BR:chx04131]
 Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    102190848 (SHFM1)
Proteasome [BR:chx03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     102190848 (SHFM1)
DNA repair and recombination proteins [BR:chx03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     102190848 (SHFM1)
SSDB
Motif
Pfam: DSS1_SEM1
Other DBs
NCBI-GeneID: 102190848
NCBI-ProteinID: XP_005679008
LinkDB
Position
4:106593643..106617350
AA seq 70 aa
MSEKKQPVDLGLLEEDDEFEEFPAEDWAGLDEDEDAHVWEDNWDDDNVEDDFSNQLRAEL
EKHGYKMETS
NT seq 213 nt   +upstreamnt  +downstreamnt
atgtcagagaaaaaacagccggtagacttgggtctcctggaggaggacgacgagttcgag
gagttccctgcggaagactgggctggtttagatgaagatgaagatgcacatgtctgggag
gataattgggatgatgacaacgtagaggatgacttctccaatcagttaagagctgaacta
gagaaacatggttataagatggagacttcgtag

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