Capra hircus (goat): 102191492
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Entry
102191492 CDS
T02910
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain isoform X1
KO
K16617
collagen type XIII alpha
Organism
chx
Capra hircus (goat)
Pathway
chx04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102191492 (COL13A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
chx00536
]
102191492 (COL13A1)
Glycosaminoglycan binding proteins [BR:
chx00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102191492 (COL13A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
102191492
NCBI-ProteinID:
XP_017898048
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Position
28:complement(19415610..19569390)
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AA seq
717 aa
AA seq
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MVAERSRKATAAGARGPGELGAPGTVALAVAPAERCARLPSPGSCGLLALALCSLALSLL
AHFRTVELQARVLRLEAERGEQQMEPAILGRVNQLLDEKWKLHSRRRRETLKTSPGCHCP
PGPPGPAGRPGLPGDKGAIGMPGRVGGKGQPGEKGAPGDAGMSIIGPRGPPGQPGTRGFP
GFPGPIGLDGKPGRPGPKGEMGPQGQKGEKGQCGEYPHREHLSGSLAALRSNQIITLKGE
QGQAGIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGM
PGMPGKHGAKGEPGIPGAKGEKGAVGSPGPLGLLGQKGEKGDAGNSIGGGRGEPGPPGLP
GPPGPKGEAGADGQAGPPGRQGDKGEPGAAGEQGPTGPKGSKGETGKGEMVDYNGNINEA
LQEIRTLALMGPPGLPGQIGPPGAPGIPGEKGEIGLPGPPGLDGEKGPRGKPGDVGPPGP
QGPPGKPGPAGMKGEDGLPGSPGEKGERGETGQPGPPGLDGPTGEKGEPGDQGRAGATGL
PGPIGLPGFIGEKGEPGEKGDPGMEVPGPPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEK
GVQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAA
GLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGEDGLPVQGCWNK
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggtagcggagcgctcccgcaaagcgacagccgccggtgcccgcggccctggggagctg
ggcgcacccgggacagtggcgctggcggtggcgccggcggagcgctgcgcgcggctgcct
agcccggggtcgtgcgggctgctggcgctggccctctgctcgctggcgctcagcctgctc
gcccactttcggacggtcgagctgcaggcccgggtgctgcgcctggaagcggagcgtggg
gagcagcaaatggagccggctattttgggacgagtcaaccaactgctggatgagaaatgg
aagctccactcacggaggcgccgggagaccctgaagacttccccaggatgtcactgcccg
ccagggcctcctggtcctgctggaagacccggcctcccgggggacaaaggtgccattggg
atgcctggacgtgtgggaggaaagggccaaccaggcgagaagggcgccccaggagatgcc
ggcatgtccatcattggtccccgtggcccccctggtcagccgggcacccgaggttttcca
ggatttccgggtcccattgggctcgacggcaaaccgggccggccaggaccaaagggggag
atgggacctcaaggacaaaagggagaaaagggtcagtgtggcgagtacccacaccgggag
cacctaagtggctctctagcagctctacgctccaaccagataattactctgaagggtgaa
cagggccaggctggcatccaaggcccaccagggccaccaggccctcccggaccgagtgga
cctctggggcacccaggactgccagggcccatggggccaccgggcttacctgggcctcct
ggaccgaagggagacccaggcatccagggctaccacggccggaagggagaacggggcatg
ccagggatgccgggcaaacacggagcaaagggtgaacctgggatcccaggagccaagggt
gaaaagggggctgtggggtccccagggccactcggcctcttggggcagaagggggaaaaa
ggtgatgctggaaactccattggaggaggccgaggggaacccggtcccccagggcttcct
ggacccccagggccaaagggggaagctggagcagatggccaggcaggccccccaggacgg
caaggagacaagggggagcctggagcagctggagaacagggacctactggccccaagggc
tccaagggcgaaactgggaaaggagagatggtggactacaacggcaacatcaacgaggct
ctccaggagatccggacactggccttgatggggccccctggtcttcctgggcagatcggc
ccacccggagctccagggatcccaggcgagaagggggagattggactgccaggccctccc
ggacttgatggggaaaagggacctcgaggcaaaccaggagatgtgggccctcctggtccc
caaggccccccaggaaagcctgggcctgcaggaatgaagggagaagacggcctcccgggg
agcccaggagagaagggggagagaggggagacggggcagccaggaccaccgggtctagac
ggcccaactggggagaaaggagaaccaggtgaccaagggagagccggagcaactggactt
cctggcccaatcgggctcccaggatttataggagagaaaggagaaccaggggagaagggt
gacccaggaatggaggttcctgggccaccagggccagaggggcctcctggacctccgggg
ctccaaggcgttcccggaccaaagggggaagcaggactagacggagcaaaaggagaaaaa
ggcgtccagggagaaaaaggagaccgaggtcctctgggattacccggagcttcaggtttg
gacggcaggcctgggccaccgggtactccaggaccaatcggagttccaggcccagcggga
ccaaagggagagaggggcagcaaaggtgaccctgggatgacaggaccaacaggagcagct
gggcttcctggtttacatggaccacccggggacaaaggaaaccggggggagagggggaag
aaaggctctagagggcctaagggggataagggagaccaaggagcgcctggattagatgcc
ccctgtccattgggtgaagatggcttgccagtccagggctgctggaacaagtga
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