Capra hircus (goat): 102191522
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Entry
102191522 CDS
T02910
Symbol
DDX60
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX60
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
chx
Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chx03019
]
102191522 (DDX60)
Enzymes [BR:
chx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102191522 (DDX60)
Messenger RNA biogenesis [BR:
chx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
102191522 (DDX60)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIN-like_DDX60
DEAD
ResIII
Motif
Other DBs
NCBI-GeneID:
102191522
NCBI-ProteinID:
XP_017908240
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Position
8:complement(469234..525201)
Genome browser
AA seq
1283 aa
AA seq
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MGGLRDRPSWWFGQDLYFFCLIECYLMNLISXGGQFAIVLVKDAEHAYFNFQELRALRTA
LILHLQHNTNIDGGFSGCWSQEWITFLEGSCPYFLINEKNIENAYKALMEELEECRALAL
GHLFGNLKWKIMMEEVDWKKEGIKTALNVKYEKASYEEEERVCETTEDLSIAVQMVKRTC
FVMGKYPELLQEADQQLIARCLRCLGFKELASSLNPVHNGIKEKKKDKYSVGLGPARFQL
QYMGHYLVHDERKDPDPRVQDFIPDNWQRELLDIVDKNKSAVIMAPKSSWKTYTSYCCTK
RVLHEGNECVVMYVAPTKALLNXVAATIENCFNKNLPNGESLRGVFTWDYCHGALNSQCS
CLWVLITVPACFEILLLAPYHQVWVKRIRYIIFNEVHCFGEEIGAEIXEHLLIIILCPFL
ALSTTISNPEHLTXXYVIXILTWLQSVKRYXKQADSMIEKSIASXRNASCRASSHKNYLL
MKESCKVRLVLDEERFNDLEKYIWSVSNHDISFDHFHLCAALTTDHIEKFGFPSDLTLSP
QEMVQLYDTTMFEFWKSCLGAQELCPEEXNNSFYFENKIVIRKMDARKCEESLKAELTSL
VKNGHTNKARMVLESVHPPSVLGPLVVENMAIMFLLLAKLREMEKLPAWFFSFDLGAVER
RAESVEKFLQXKQEHRRPPRADREARDVVNKLHKVAKIHGEIQGSVSVQLSTLCREGRDS
RTSQQGGRWLHGPVSCRWDLFAGQFCAWRTVCAVGPSASGPSFWGPSSWGLILTPLGLKC
IPPAPILMSSVTSCSRSVHIFLGWSQSSSWNLTLRLPPILQLTFRLITSPSLALPSGLLS
SDQHVWALPSPLQVRFLLLSSDSPPHTPLPRAVSPYFNEDLTQTVGDEKRLEAVWSVTAG
QQMKTAMSTLALGVNMMPCESVVFTEYSFFFLDALNFQQMSAHAGRHGEGLTGSVFFCNI
PLPKTEQPLRSNVPELNDQFPLSLSVVLRRTLLGAKADDKEDASAKALSVLQRSLMSFKQ
PNIECMLKFYFIYSLQFLVTEGFLDQECVPIGYSGLVSHLHYHEPSKFVLVSLLVKGLFY
KLCVPTDIKGQKTFSEDIMETLVVVLANLFGXRYFLQCVKNFEKRFFSFSGCCQRRGGLD
TEGCLLSAGVLKALPEDLATGAEEHNDRVQNVASFLLTISKLADMRKECQLPLSETDTLA
PYLRRYTVPSGACLSLLTCCSGCDHLRFLPCGLNWRYRGRALRIALSVCPVCCIHSWALA
PLGCSHVLAVAPSAALTIGLQVS
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atgggtgggctcagagacaggccctcgtggtggtttggacaagacctgtacttcttctgc
ctgattgaatgctacctcatgaatctaattagctaaggaggacagtttgccatcgtttta
gtcaaggatgctgagcatgcatatttcaacttccaggaacttcgtgctctgagaacggca
ttaatcctccatcttcagcataataccaacattgatggtggcttttctgggtgctggtca
caagagtggatcactttcctggaaggcagttgtccgtattttctgattaatgaaaagaac
attgagaatgcttataaggcactgatggaggaactggaggaatgccgagctttagcatta
ggacatctttttggaaatttaaaatggaaaattatgatggaagaagttgactggaagaaa
gaggggatcaaaacagccctaaatgtgaagtatgaaaaggccagctatgaggaggaagag
agagtatgtgaaaccacggaagacttaagtatagctgtgcagatggtgaaaaggacctgc
tttgtgatgggaaaatacccagagcttctgcaggaggcagaccagcaactcatagccagg
tgcctgcggtgtttagggttcaaggagctggcgagttctttgaatccagtgcataatggc
ataaaggagaagaaaaaggacaaatactcagtgggtcttgggccagcccggtttcagctg
cagtacatgggccactatctggtgcatgatgagaggaaagatccagaccccagagttcag
gactttattcctgacaactggcagcgagagctcctggacatcgtggacaagaacaagtct
gcagtcatcatggcacccaagtcctcatggaagacctacacctcctactgctgcacgaag
agggtgctgcatgagggcaatgagtgcgtggtcatgtatgtggcccccaccaaggccctt
ctcaattaagtggcagcaaccattgagaattgttttaacaaaaatctgccaaatggggaa
agtctgcgtggtgttttcacctgggactattgtcatggtgccctgaactctcagtgttct
tgtttgtgggtgctcatcacagtgcctgcctgctttgaaattctgctgctggctccgtac
caccaggtgtgggtgaaaaggatcagatacatcatatttaatgaggtccactgttttggt
gaggaaattggagcagaaatctaggagcatctcctcatcattatcctctgccccttcctg
gccctttccaccaccatcagcaacccagagcatctgacttgataatacgtaatttaaatt
ttaacgtggctacaatctgtaaaacggtactgaaaacaagcagacagtatgattgaaaaa
agtattgcttctnacagaaatgccagctgccgtgccagttcccacaaaaactacttgctg
atgaaggagtcatgtaaagtgagacttgtgctcgatgaagagagattcaatgatttagag
aaatacatatggtcagtgagcaatcatgacatttcctttgaccattttcacctgtgtgct
gcgctgacaacggaccacattgaaaagtttggattcccttccgatcttaccctttcacct
caagaaatggtccagctttatgataccaccatgtttgaattctggaaaagttgtctcgga
gctcaggagttgtgtccagaggaataaaataattcattttattttgagaataaaatagtc
attaggaagatggatgctagaaagtgtgaagagagcttaaaggcagaactgacaagctta
gtgaagaatggccacaccaacaaggcaagaatggtcctggagagtgttcatcctccttca
gtcctcggtcctttggttgttgaaaacatggcaattatgtttctacttcttgcaaagcta
agggaaatggagaagttacctgcatggtttttttcttttgatttaggggctgtggagaga
agggctgaaagtgtggaaaagtttctacagtgaaagcaggagcacagaaggccccccagg
gcagatagagaggcccgcgacgtggtgaacaaactgcacaaagtggcaaaaatccatgga
gaaatacaaggcagtgtgagtgtgcagctcagcacactgtgccgggaaggccgggatagt
cgcacgtcccagcagggaggccgctggctgcacggaccagttagttgtcgctgggacttg
tttgctggccagttctgtgcttggagaactgtgtgtgcggtgggcccctctgcctcgggg
ccctcattctggggccctagttcttggggtctaattctgactcctctgggtctgaaatgc
atcccccccgcccccatcctcatgtcctcagtgacgtcctgttctcgaagtgtccacatc
ttccttggatggtcacaaagttcttcttggaacctgaccttgaggctccctcctatactg
cagctgacattcaggctgataacctcaccctcactcgctcttccttctgggctgctgtcc
tcggaccagcatgtgtgggctttgccctcacctcttcaggtgcgcttcctactactctca
tccgacagtccccctcacacgcctctccctagggctgtgtccccctactttaatgaagat
cttacgcagactgtgggagatgagaaaaggctagaagctgtgtggtctgttacagcgggg
cagcagatgaaaacagctatgtcaactcttgctttgggagttaatatgatgccatgtgag
tcagttgtttttacagaatattcttttttttttttggatgccttaaacttccaacagatg
tccgcccatgcaggcagacatggggagggcctcacaggaagcgtgttcttctgcaacatc
ccattacccaagacagaacagcctctgagatcaaatgtgcctgaactgaatgaccagttt
cccctaagcctttccgtggtcctcagacgcacgctgttaggtgccaaggcagatgacaag
gaagatgccagtgccaaggcactgtcagttctccagcgttcactgatgtccttcaagcaa
ccaaatatcgagtgcatgttgaaattttattttatatattctttacaattcttggtcaca
gagggattcctggatcaagagtgtgttcccattggatattctgggcttgtctcccattta
cactaccacgaaccctccaagtttgttttagtgagcttgctggtgaaaggtctattttac
aagctgtgtgttccaaccgacatcaaaggccaaaagacattttctgaagacataatggag
actctggtggtggtgttagcaaatctttttggatgacgatattttcttcagtgtgtgaaa
aactttgaaaagagatttttttcattcagtggctgctgtcagaggcgaggtgggttagac
acggagggctgcctgctgtccgctggagttctgaaggccctgcctgaggacttggccacc
ggggcagaggaacacaatgacagagttcagaacgttgcttccttcctcctgacaatttct
aagctggctgacatgagaaaagaatgccagctgcctctctcagagactgacacacttgcg
ccatatctgaggcgctacacagtgccgtccggcgcttgtctttcccttctgacttgctgc
agcgggtgtgaccacctgcgctttcttccctgcggcctgaactggcgttaccgtggccga
gcccttcgcattgcactgtcggtgtgccccgtctgctgcatccattcgtgggcccttgct
cccttaggctgctcccacgtcttggctgttgcacctagtgctgccctgaccattggcctg
caggtgtcttag
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