Capra hircus (goat): 106502003
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Entry
106502003 CDS
T02910
Symbol
ATG4B
Name
(RefSeq) cysteine protease ATG4B
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
chx
Capra hircus (goat)
Pathway
chx04136
Autophagy - other
chx04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106502003 (ATG4B)
04136 Autophagy - other
106502003 (ATG4B)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
chx01002
]
106502003 (ATG4B)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
chx04131
]
106502003 (ATG4B)
03029 Mitochondrial biogenesis [BR:
chx03029
]
106502003 (ATG4B)
Peptidases and inhibitors [BR:
chx01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
106502003 (ATG4B)
Membrane trafficking [BR:
chx04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
106502003 (ATG4B)
Mitochondrial biogenesis [BR:
chx03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
106502003 (ATG4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
106502003
NCBI-ProteinID:
XP_017895231
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All DBs
Position
3:complement(383387..399631)
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AA seq
393 aa
AA seq
DB search
MDAATLTYDTLRFAEFEDFPETSEPVWILGRKYSILTEKDEILADVASRLWFTYRKNFPA
IGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWAQRKRQPDSYCRVLQAFLDRKD
SCYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDAWSALAVHVAMDNTVVMADVR
RLCRSGLPCAGAEAFPADSERHCNGFPAGAEGGECTAPWRPLVLLIPLRLGLADVNAAYA
GTLKHCFRMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVAAADRCPVPDESFH
CQHPPGRMSITELDPSIAVGFFCKTEDDFNDWCQQVRKLSLLGGALPMFELVEQQPSHLA
CPDVLNLSLDSSDAERLERFFDSEDEDFEILSL
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggacgcagctactctgacctacgacacgctccgattcgctgagtttgaggatttccct
gagacctcggagcccgtctggatcctggggaggaagtacagtatcctcacagaaaaggac
gagatcttggccgacgtggcgtcgagactgtggtttacgtacagaaagaacttcccggcc
attgggggcaccggccccacctcggacacgggctggggctgcatgctgaggtgtggacag
atgatcttcgcccaagccctggtgtgccggcacctgggccgcgactggaggtgggcgcag
cggaagaggcagcccgacagctactgccgcgtcctgcaggcgttcctggacaggaaggac
agctgctactccatccaccagatagcacaaatgggcgttggcgagggcaagtccattggc
cagtggtacgggcccaacaccgtcgcccaggtccttaagaagctggctgtcttcgacgcc
tggagcgccctggctgtgcacgtagcgatggacaacacggtggtgatggcggacgtcagg
aggttgtgcaggagcggccttccgtgtgccggggctgaggccttccccgcagactccgag
cggcattgcaacggctttccggcgggggccgagggcggcgagtgcacggcgccctggaga
cccttggtgctgctcatcccgctgcgcctggggctggcggacgtgaacgcggcctacgcg
ggcacgctcaagcactgcttccggatgccccagtccctgggggtgatcggagggaagccc
aacagtgcccactacttcatcggctacgttggggaggagctcatctacctggacccccac
accacacagccggccgtggcggccgctgaccgctgcccggtcccggacgagagcttccat
tgccagcacccgcccggcaggatgagcatcacggagctcgacccgtccatcgccgtggga
ttcttctgtaagactgaggatgactttaacgactggtgtcagcaagtgagaaagctgtcc
ctgctgggaggcgccctgcccatgtttgagctggtggagcagcagccttcccacctggcc
tgtcccgacgtcctcaacctgtccttagattcttctgacgcggagcgactggaaagattc
tttgactcagaagacgaagactttgagatcctgtccctctga
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