Capra hircus (goat): 106502843
Help
Entry
106502843 CDS
T02910
Symbol
SOX17
Name
(RefSeq) transcription factor SOX-17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
chx
Capra hircus (goat)
Pathway
chx04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
106502843 (SOX17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
chx03000
]
106502843 (SOX17)
Transcription factors [BR:
chx03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
106502843 (SOX17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
106502843
NCBI-ProteinID:
XP_017913995
UniProt:
A0A452FGK4
LinkDB
All DBs
Position
14:complement(59833743..59836651)
Genome browser
AA seq
410 aa
AA seq
DB search
MSSPDAGYASDEQSQPRSALPAVMAGLGPCPWAESLSPLGDMKMKGEAAASGGAPAGPAG
RAKGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEE
AERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLAEPPAAALGPEGGRVAMDGLG
LPFPEQGFPAGPPLLPPHLGGHYRDCPGLGAPQLDGYPLPTPDTSPLDGVEPDPAFFAAP
LPADCPAPGPYSYAPAADYAGPPEPPGAGPLHPRLGPETAGPAMPGLLAPPSALHMYYGP
VGSPAAAAGGGGRGFQMPPQPPPPGPGQPSPPPEALHCRDSAEPGAPAELLGEVERTEFE
QYLHFVCKPEMGLPYPGHDAGVTLPDGHGALSSVVSDASSAVYYCNYPDV
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcccggatgcggggtacgccagtgacgagcagagccagccccggagcgcgctg
cccgccgtgatggccggcctgggtccctgtccctgggccgagtcgctgagtcctctcggg
gacatgaagatgaagggcgaggcggcggcgagcggcggggcgccggccgggccggcgggc
cgagcgaagggcgagtctcgcatccggcggccgatgaacgccttcatggtgtgggcgaag
gacgagcgcaagcgcctggcgcagcagaacccagatctgcacaacgccgagttgagcaag
atgctgggcaagtcgtggaaggcgctaacgctggcggagaagcggccgttcgtggaggag
gccgagcggctgcgcgtccagcacatgcaggaccatcccaactacaagtaccggccgcgg
cggcgcaagcaggtgaagcggctgaagcgggtggagggcggcttcctgcatggcctggcc
gagccgccggcggccgcgctgggccccgagggcggccgcgtggccatggacggcctgggc
ctgcccttcccggagcagggcttccccgcgggcccgccgctgctgcccccgcacctgggc
ggccactaccgcgactgcccgggcctgggcgcgccccagctcgacggctaccctctgccc
acgcccgacacgtccccgctggacggcgtggaacccgacccggccttctttgccgcgccg
ctgcccgcggactgtccggcccctgggccctacagctacgccccggccgcggactacgct
gggcccccggagccacccggcgcggggcccctgcacccgcggctgggcccggagactgcg
ggccccgcgatgccgggcctcctcgcgccccccagcgccctgcacatgtactacggcccc
gtgggctccccggcggcggcggcaggaggcgggggacgcggcttccagatgccgccgcag
ccgcccccgcccggcccggggcagccgtcgcccccgccagaggccctacactgccgggac
agcgcagaaccgggcgctccagccgagctactcggggaggtggagcgcacagagttcgaa
cagtacctgcacttcgtgtgcaagccggagatggggctcccctacccaggacacgacgcc
ggcgtgaccctgcccgacggccacggggccctgtcctcggtggtgtccgatgccagctcc
gcggtgtattactgcaactatcccgacgtgtga
DBGET
integrated database retrieval system